|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000245_pilon:79156..81650+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033177 ID=XLOC_033177|Name=XLOC_033177|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2495bp|location=Sequence derived from alignment at sc0000245_pilon:79156..81650+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATTATTGTCGTTTCAGGAAACAATGACAGCAAAGAAGTTTCGGAT
TTTAATTGTACTCCCGCTCATTATTCAGAATGTTATCCTTGAACAATGCA
GTCAAATGTCATTTCAAAGATTGGATggaattcattttgaaattcttgat
AGATACACAAATCTTCCTATTGACCCTTTTGCTAACTTCCACGAAAATAG
CATCGAAAATTGTCTCACTAGATGTTACCATACAAAAAACTGTATGTCTT
TTCAAGTCCAAAGATTCGATAGTTATCATTTCGGTTGTTCACTTTATTGG
TTTGCTACTAAACGATCTGGTACAATATTTACTCGAAAGGAAAACAGTAT
AGCCTTCATATCAGCAATTAATTTAGAAAGGCTGATTGATTTTTCAATAG
TATCATCAtgcaagaataaaaaaaatgatttttatcttATGTCGTTGAAA
AGTCAAACAGAAGAAAAATATCGCTACGCTCGTTGCAATGGTTTTGGTCG
AGAAATCATTGGCCAACTAAAATATCCAAAAAGAGTATTTTCTCTTTCTT
CAGTGAATGGAATTTTTACATCAGATTACTGGATCGGGTTAAATGAACTC
TCAGATCGAGTCCAAAATACTGATTTGCTAATCAGTTTCACTGTACCATA
TCCATTTGTCGAGAGTGATCTAATAGCCATTTACAAGGACGTCACAGTAG
GAAAGGAATCAGATTCGTGGGTTTTCCGTGGGACATTTGCATCAGCCACA
TCAACTGTCGGAGACATGATAGATCAAGTTGCTTTTAACAAAGAACGTGG
CTGGTGGATAAAAAATGACCATGAAAAACCTAATAAAGATCAATTCGTTA
CTCAAGATGGGTGCTCTTTTGATCACGAGGGAAATTTAGGTGAAACACAG
CTACCATTTTATTGGAAACTTCAAAATGGCACATATTTTTGCGCAAAAAC
GGTCCAGATAAGAATCTAATATATcataaaatttaacttttatcaaaaag
ttataaaaaatatgattGCTTGTCACATAGAGAAAGTGTCTACTTCgcat
ttattgtttcatttttaaaacaaagttaaaacgcATGCGTATTTATAAAC
TGTTAGTTGTTATTTTACGCAATATACGTACAGTATATTGGTCGGGGTTA
TGGATGGTGAAATGTGTCGTTCTTTTTAATGTTGCGAAGTAGGCACTTTC
TCCCCCTCTTGTAGTCGATATTTGTACTTTACACTGCATCACAGtttgtt
gaagaaaaaaaacagtcCCCTTAATAACTAATTATGAAACCAAATCTCCA
ATCATCACAAGCTACTATTCATATCGTACTTCTCTAAAAGGAAGGGTTCC
ATTGCCACAAACTCAACCTGATCAACACCTCCGACCACAGGTTCAAGGAT
ACCAGTTTATTTAAGAATTAGAAGTAGCGGCTATCCTATATTAAGTCCTT
CCATAATGTTTGAAGTGCTCGTCACACTGGAAGCCGGTGAAAAAGTATCC
ATTGCTGATGAAGCGTTTTTGACTTTCGAAACATTGTTATTGAGAGACTT
TCCTTGTTTTGTGACTTGAATTGTAAACGAGCCCATACCTGCTGCCATCT
CTGCTTCTGCTTGGCTGTAAGGTTTATCTTTCAGTTCCCGCattctaaag
aaaaattaaaagctcTAAGCGAGAGTGTGtacatttttttgtaagaaaaa
cttaaaagccTTATGGGGTAAAAATATCACAGTAAAACTTGCTTCAATGG
GTCCTATATGTTGaacaccaaattaaatttcccaAAACTCCACTTTGATC
ATCCTGCGAACTCCacatgaaacataaaaaagaatCCCCAAGTTAGATGT
GACAGTTTCCCATTTAAAGGGTattatttttaggtaaaattgGCGGAAGg
gagaagaaaatcaatttttgagatTGATTCAAGACAGCATCTCTAGGGGA
TAGATCATCATAATAAAGGCTTCAAACCAGTAAAATATAATGTGCACAAT
TTAGGAAAACTAAGTAAAGATAGGTCCACATATTTaaaggaaaatattga
aataagaGGAGGGGAACCGGTTACTCAAACCCTAAGATcagacttttcaa
atttttaaagccagattgacagTTAAACATGGAGGTCTGAATTACTATGA
CAAAAATGCTGAGCTTGCGAAAACATTGAGGGTTTAGaaaaaaaCTGTGT
GCGTTTGGTCAGTTGATTGTTCTATTTGACAATATAATGTCATATAATGT
ATAATGCTTCATATAATGTATAAATTGGTTTAAGGACACTATTCTGTGTT
TCATTGTATAGCACAatgtacgcaaatggctatacccccccccctctggt
aagtacgtacttgtTCAttctatgtggacggcccctaatCATCTCCCACT
TCATAAATGGATGGAAAAGATTAGGAAACTCACCTCTTTTTATGATTCTT
AGTCTTCTTGTGACTTGTCAGTGTTTTCTCATCCATAAAGTAGCG Coding sequence (CDS) from alignment at sc0000245_pilon:79156..81650+ >XLOC_033177 ID=XLOC_033177|Name=XLOC_033177|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1836bp|location=Sequence derived from alignment at sc0000245_pilon:79156..81650+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATTATTGTCGTTTCAGGAAACAATGACAGCAAAGAAGTTTCGGAT
TTTAATTGTACTCCCGCTCATTATTCAGAATGTTATCCTTGAACAATGCA
GTCAAATGTCATTTCAAAGATTGGATggaattcattttgaaattcttgat
AGATACACAAATCTTCCTATTGACCCTTTTGCTAACTTCCACGAAAATAG
CATCGAAAATTGTCTCACTAGATGTTACCATACAAAAAACTGTATGTCTT
TTCAAGTCCAAAGATTCGATAGTTATCATTTCGGTTGTTCACTTTATTGG
TTTGCTACTAAACGATCTGGTACAATATTTACTCGAAAGGAAAACAGTAT
AGCCTTCATATCAGCAATTAATTTAGAAAGGCTGATTGATTTTTCAATAG
TATCATCAtgcaagaataaaaaaaatgatttttatcttATGTCGTTGAAA
AGTCAAACAGAAGAAAAATATCGCTACGCTCGTTGCAATGGTTTTGGTCG
AGAAATCATTGGCCAACTAAAATATCCAAAAAGAGTATTTTCTCTTTCTT
CAGTGAATGGAATTTTTACATCAGATTACTGGATCGGGTTAAATGAACTC
TCAGATCGAGTCCAAAATACTGATTTGCTAATCAGTTTCACTGTACCATA
TCCATTTGTCGAGAGTGATCTAATAGCCATTTACAAGGACGTCACAGTAG
GAAAGGAATCAGATTCGTGGGTTTTCCGTGGGACATTTGCATCAGCCACA
TCAACTGTCGGAGACATGATAGATCAAGTTGCTTTTAACAAAGAACGTGG
CTGATGTTATTATTGTCGTTTCAGGAAACAATGACAGCAAAGAAGTTTCG
GATTTTAATTGTACTCCCGCTCATTATTCAGAATGTTATCCTTGAACAAT
GCAGTCAAATGTCATTTCAAAGATTGGATggaattcattttgaaattctt
gatAGATACACAAATCTTCCTATTGACCCTTTTGCTAACTTCCACGAAAA
TAGCATCGAAAATTGTCTCACTAGATGTTACCATACAAAAAACTGTATGT
CTTTTCAAGTCCAAAGATTCGATAGTTATCATTTCGGTTGTTCACTTTAT
TGGTTTGCTACTAAACGATCTGGTACAATATTTACTCGAAAGGAAAACAG
TATAGCCTTCATATCAGCAATTAATTTAGAAAGGCTGATTGATTTTTCAA
TAGTATCATCAtgcaagaataaaaaaaatgatttttatcttATGTCGTTG
AAAAGTCAAACAGAAGAAAAATATCGCTACGCTCGTTGCAATGGTTTTGG
TCGAGAAATCATTGGCCAACTAAAATATCCAAAAAGAGTATTTTCTCTTT
CTTCAGTGAATGGAATTTTTACATCAGATTACTGGATCGGGTTAAATGAA
CTCTCAGATCGAGTCCAAAATACTGATTTGCTAATCAGTTTCACTGTACC
ATATCCATTTGTCGAGAGTGATCTAATAGCCATTTACAAGGACGTCACAG
TAGGAAAGGAATCAGATTCGTGGGTTTTCCGTGGGACATTTGCATCAGCC
ACATCAACTGTCGGAGACATGATAGATCAAGTTGCTTTTAACAAAGAACG
TGGCTGCTGCCATCTCTGCTTCTGCTTGGCTGTAAGGTTTATCTTTCAGT
TCCCGCattctaaagaaaaaCTGCCATCTCTGCTTCTGCTTGGCTGTAAG
GTTTATCTTTCAGTTCCCGCattctaaagaaaaaATTCTTAGTCTTCTTG
TGACTTGTCAGTGTTTTCTCATCCATAAAGTAGCGATTCTTAGTCTTCTT
GTGACTTGTCAGTGTTTTCTCATCCATAAAGTAGCG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000245_pilon | genome | sc0000245_pilon:79156..81650 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-918:2445 |
| Aaloc | 805-867:1593 |
| Aaloc | 1-801:1 |
|
