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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000282_pilon:334388..338027+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033006 ID=XLOC_033006|Name=XLOC_033006|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3640bp|location=Sequence derived from alignment at sc0000282_pilon:334388..338027+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGCTGCAACTGCTACTGTTAATCCTTTCCGTATTATGGACAACTCTGT
TTTGGACTCTTCCATGGATTCAACTCAAGGCTTACTTGGCTTCATGGCAA
GTGCTAGCCGGCAAATCAAAACTTATCTTGGACctgaacagcaacaaaaa
tcaaatcagGTAAGTGTTTCAGTTAACTTATTTTCTACCACCCATCAAGT
TTTAAACATCTACAACTTCTTTTATACGAATAACTATTTATGAGCAATTT
GGCTTAGAAGTGCTAAAAAATAGGAACAATTTAGGACATAATACTGAGGG
TTGCATTGTTGAATTCAAGCATTTTAAGGCTCAAAATAGTATAACATTTT
GTATATTGCCCTAAGACAAAAGAATaacataagaacaatttaaggcttaa
accaaaatttaaatGGCTCTATtagaaaacacagaaaaaaaccAGAACTT
CTGCTAATTTTATcgtttctaaattttttacaaCAAATTAAAAGTTAATC
AGTGTGATCTTTAAGAATTTCCTTTCCGAATCTTCACGAAAAATGATGAC
AAATACACGCTAGACAGTGTCAGACACAAAGCGATTATGAAAgaaacacg
ttttttaataagaacatccgtTTTTTAAGCCTTtgcatgttcttaacttt
ttgagttttgagccgaaaaaaattttgcaccatttatgagtatttttgtc
tttttcctaagaaatttggttTTATTGCCCACAAAGCCTCAAAATCTtca
taacttgttcttaatatttgggccatcgaagccttatgttcttatatata
ttgttcttataaaaaattgtgtatATAACAGGAATGTTTTACAAAAATAG
TAAGCAGGCAAGCTATAATCTCCATTTAATGTGCCGCGTGAGGGAATACC
TGTTACAGGATGTATTATATTGTAAAAACAAATACTTTTAGCTTAGACCA
GAAAatgctacatgtttttttataacaacatctgaaaagtttttccatgt
tcttaactttttgagttctaagcctaaaaatgttctaaaaacaTTCTTAA
ATTTGTGAGATCATTTCTGTTCGATATGTTAAGTACTTGGGTGTTTTCTG
AAAAGCCTTGGGAATGCTCTTATCTTAAGTATTTTGGTCATTGAATCCTT
GTGTTCATAtatattttattcttataaaaaacaagtaTGAGCAAAAGACA
GAAGAATATTGTGTGTTTTTATAATGTGTATGCACTAatctctatttttc
tttttgtattctTCCTTTTGCGCATCCGTCCTTTATtaagaatattgaaa
attagATGCCGCCATTTTGATGGAATCCATAATTTATTTGAAAGAGTGAG
GATGTCGTTTGTTGATAGGAGACCACACCTGTTTACATGGGAGacgataa
ttacaaggtctcaaaagaaggttgtctattgctcattccgacatcgactt
taaacctgactgaaattcgagccgttactagcaaccctgcggggcccaag
gcgccgagtatgcacccggcacagtgacaagccgttactagcaaccctga
ccctacctaactgttagttaatcaattccaaacaacaaaacccccggaaa
atttaaaatgtcggaatgagcagtagacaaccttcttttgagaccttgta
attatccttttccTGTTTACATCGGTTTATTAAAAAGTGGCGATGATGCG
ACGTGTGCatgtctgaaaaagaaaatctaacaATGTTGCACTTTTTTGCA
ATCGTTtgtcattagcgagtttatgtatttgcacttttgaggacggcgga
gGATAACCCGTAGTTTTGACCCACTTAATGCTCTCAGTTGATCAGGGTCT
AGACAAATCAAGAAGCTTACCGTCTCCTTCGCAGGAAAACACATATAAAT
AAACTCACTATTAAAGGTGCCATCACAGTTGAATAGTTAGATCATGCCGA
GAACGTTATCATCCTCATTGGTAggataaagaaaatattgtctTTGATTC
AGAATCAAAGACGATATTGAGACAGGGCTGTCTAGCTGTATATTTACTTT
CATGAAAATTAGCAGTTTTATTGGAATCAAGGGTCAAATAAGTTCTTTGT
AGAATAGatgttttgaggattttttaaattcaattttcatatttatttta
CTGCAACATTACTCATATTGTTGTTCACCGAAAAGCCTTGAAAATAAGTA
AGCTTGAAATATATAAACAACTTTTTGTTCAACCACGTCAAGGGCGGGGA
CCTATTTCTACACATTATAGAAATCTTTATTGCTTTAACATGGATTTTCT
ATTTGATAACTGCTTAACGAAAAACTGTAAAATATTATCATGACGTCAAT
AAGCAATTAAAATTTGCAGTCAAAAAGACATGAGATAATTAGAATTGCAT
CGTAATGAGTCAATTAGGATCGAGAAGAGATTTATCTTCCGGCGGTATTC
TTACTTTAGCCCtctattttgtcaatttttaattgagtttgttttgattt
actatGCGATAAGCCTATAGGTGGTCTCAATTTGTTTTCAATATAATTTG
TCTTCAATACGTTTTATACATGTTAAATAGTGACTAGATATAGAACAGTT
CATCTCTTGATCGGATCAAATTTAGTTTAATGAAAAACAAATAGAATTTG
CCAGTACTATTTTGAACTTaaaaaaaGGACTCATCAATGTCAATGTCATG
TTAGACTCTCAGACTAtttttttCCGCAGTGTGCAAAACCTcctcttttt
taaaacatccaaaCACGAGTGACTCGGCGAAAATCTATCCTTAACGAATT
TCAGGAAGATTTTCTCCTATAAAGGGAGGATGTTAAATCTTAGAGTTTTA
TTATTACATAAGTGtttctgtttcatatcagacacatgtttcataccAGG
ACGGTGTCCctttattgttatattgtgctgaatgaacaaaaaactgtttt
tcttttcctctttatgACCGATTTTGCTCCTCATCCGTGTTAATTCAATG
TGAAAATACgtgtaaattgaaattgacgagtaagcaaacgatatcactct
tattaaaaaaaaaagtgaactgTAAAATACACTgtcaaagaaaaactttc
atTGTACATATAATGTTGAACTAATTATTGTCAATTCTTTTTCAGAATAA
GCGACGACACCAACAACTCTTATTCCAACTGTCACAACTCAAAACACAAA
ACTACAGCTTCATTCCTGACATCTTAGCTCCATCCAACACTAAAACATTT
AATTCTTCACCATGCATCAATAACACTTTCTGTGGAGTTGAATCTTCACC
AGCCAGTCCAACACCAAGCTTAGATAGCGTTGGATCAGTTGAAGATATTG
ATGCTCCTACCTACAGATCATCATGTCTGATCAAATCTCGACGACAGAAG
AGGACAAGGCCTTCAATTCAATGTTCCATGGAAGACAACATCACCAGTAA
ACGTACAAAGTACATTAACAACTGTTCAATCTCACCATCAACTTGTGCAT
TATCTGAAATCCCAAATGTTTCGCTGACAAGTATGGATCCACCATGTCCT
TCTCCTGATTTTGACGATTTGGTTGATTGTATGTTGACTGAAGATGCTCT
TGCCATGATTGACGTAAACAACTACTTACCTCAACTGTGA Coding sequence (CDS) from alignment at sc0000282_pilon:334388..338027+ >XLOC_033006 ID=XLOC_033006|Name=XLOC_033006|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1308bp|location=Sequence derived from alignment at sc0000282_pilon:334388..338027+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGCTGCAACTGCTACTGTTAATCCTTTCCGTATTATGGACAACTCTGT
TTTGGACTCTTCCATGGATTCAACTCAAGGCTTACTTGGCTTCATGGCAA
GTGCTAGCCGGCAAATCAAAACTTATCTTGGACctgaacagcaacaaaaa
tcaaatcagatgGCTGCAACTGCTACTGTTAATCCTTTCCGTATTATGGA
CAACTCTGTTTTGGACTCTTCCATGGATTCAACTCAAGGCTTACTTGGCT
TCATGGCAAGTGCTAGCCGGCAAATCAAAACTTATCTTGGACctgaacag
caacaaaaatcaaatcagAATAAGCGACGACACCAACAACTCTTATTCCA
ACTGTCACAACTCAAAACACAAAACTACAGCTTCATTCCTGACATCTTAG
CTCCATCCAACACTAAAACATTTAATTCTTCACCATGCATCAATAACACT
TTCTGTGGAGTTGAATCTTCACCAGCCAGTCCAACACCAAGCTTAGATAG
CGTTGGATCAGTTGAAGATATTGATGCTCCTACCTACAGATCATCATGTC
TGATCAAATCTCGACGACAGAAGAGGACAAGGCCTTCAATTCAATGTTCC
ATGGAAGACAACATCACCAGTAAACGTACAAAGTACATTAACAACTGTTC
AATCTCACCATCAACTTGTGCATTATCTGAAATCCCAAATGTTTCGCTGA
CAAGTATGGATCCACCATGTCCTTCTCCTGATTTTGACGATTTGGTTGAT
TGTATGTTGACTGAAGATGCTCTTGCCATGATTGACGTAAACAACTACTT
ACCTCAACTGTGAAATAAGCGACGACACCAACAACTCTTATTCCAACTGT
CACAACTCAAAACACAAAACTACAGCTTCATTCCTGACATCTTAGCTCCA
TCCAACACTAAAACATTTAATTCTTCACCATGCATCAATAACACTTTCTG
TGGAGTTGAATCTTCACCAGCCAGTCCAACACCAAGCTTAGATAGCGTTG
GATCAGTTGAAGATATTGATGCTCCTACCTACAGATCATCATGTCTGATC
AAATCTCGACGACAGAAGAGGACAAGGCCTTCAATTCAATGTTCCATGGA
AGACAACATCACCAGTAAACGTACAAAGTACATTAACAACTGTTCAATCT
CACCATCAACTTGTGCATTATCTGAAATCCCAAATGTTTCGCTGACAAGT
ATGGATCCACCATGTCCTTCTCCTGATTTTGACGATTTGGTTGATTGTAT
GTTGACTGAAGATGCTCTTGCCATGATTGACGTAAACAACTACTTACCTC
AACTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000282_pilon | genome | sc0000282_pilon:334388..338027 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 160-654:3146 |
| Aaloc | 1-159:1 |
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