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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:192066..194736- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032990 ID=XLOC_032990|Name=XLOC_032990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2671bp|location=Sequence derived from alignment at sc0000078_pilon:192066..194736- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAAATATGCTATTTCACTGGGCATCAGTGGCTCAACAGCCAGTCTCAT
GTTAACAGCTTGGTCAGCAAGCAATCTATTTGGTCGTCTAGCCTTTGGAA
GCTTTATATCCCGTTATCGCGATAAAGTCCTCATCACATATCAAATAGCG
ATGTTTCTAAGCGGAGTGGTCAGCATTGGAGCTTATTTTGCCGACAATAC
ATGGAGTTTGTTTCTCTATTGTTGTATTTATGGAATGTTGGATGGTTCGA
ATATTGGATTAGCCAGTCTGGTGACGATTGATTTGACAAGTCCACTTGAT
TTAGGAGCAGCTTGGGGTATACAACAAACGATCAATGGAATTCCAACCAT
TGCTGGTCCTGTTCTGATTGGTAAATATTTGTTTGTTGATAAATCGTCTT
TGCGAATCAAAGAATTATATCCAAAATGACGCACTATTAATTAGTTGCTT
TATAAAAGATCCAACTTCCGGAGTCAAACAGGAGGGCGGGGAGTCGGTAC
TTAAGTCTCAGACATCATGTTGATTAGTTATGTGGTGGCATACCCAAAAA
AGTCCTTTTAATACCGTGGGGTACTAGATTACCAAAAAAGTGGTATCCAA
TATTCAAATTTCATTTTTAGAAAGGGTATAACTTCTCTAAAATGGGGTGA
TGGTATGGAAAAAAACTCAAACCCCTTATATGTCTAAGTTTCAGTACTGA
CCCCCACCCCCGAGTCAAATCTTTTTTTACTTTAGACATTTGAACCATAC
CACAAGGTACAAAATACGCAAGACCTTGACTAAGATAACGGTTGAATTTC
AAACACTTTAGGTGCAATGAACGATGCGAAGGTATTGAGTGCGAATTACA
TGTTCGTTTTTACTGGTGGTACATTCATCCTTGGAAGTATTTTCATGAAC
TTTGCACGCGTGTTACGAAACCGTGAGAAATATGTTGTTGAGGACAAAAC
ACCATTTGATGAAGAAGTTACTGAACTTGCTGAAATAAGACCAAGAGCTG
CAGCTTCCATTGTAAGCATAATTATTGTTAACTGCACACTTTTCTGTTAC
AGTAGACTCTCCATACTTAAGGCCAGTCTCCACTTGCGCGCGCTGCGATA
GCTCCTTTTGGCTTCATTCCTTTTTTGCTTGGAAAAAAAATTACGTCATA
AAAATGTAGCGCGCGCTCAAAAAATAAGTTGAACACATTTCAACTTTTTG
CAACTGTTACGTCAGATCGCGTTAATGGAATTACTTCATTTTTCTTTTGA
CGTGGTAGCTTTGCTCGAAAAAGTGCGATCGCAGCGCGCGCAAGTGGAGA
ACGGTCTTTAGAATTCATGATATGCACCATTGTATCAATGTCTTCTAACA
TTAAATCACGGACCCAACAGCTGATTGGATGCAAGTGACGTATTGACTGA
TGGGTCTATGGTGTAATGTCGAATGTCTTCAAATCGCATCCTTAAAAAAC
TTGAACACTTTGAATGAAAAACTCTCACAAACGACTCCTTATTATGCTCT
ATAAACTCGACATAATTTTAACTCAAAATTTTGACTTCCCTGTGATTCTA
CAAGTCTTTACTTTCAAACTTTTTAACTGAAAATCTTTTCTTCAATTTAG
ATTCCACGTAAAGCGAGTACAGCATTTGGACCGAAGAAAATTTCAGGCGA
GGTAAGCGTTTAAGATTCTCAAGTACTGGTCGAGATTTAAATATACAGTC
AACTCTCTCTCTCTCTAATTCGAACCTTTATTATTTGAATCTCTCTGTAA
TTCAAACTAAAGCATTAGCCCGCAAAGCTGGAAAGTCAAAACCTCTCCGT
AATTCGAATTTTTCACTTATTCGAAGAAAATTCTTGGACCCTTGAAATCG
AATTAGAGAGTGAACTGTACCTCGAATAGCAACCGATATTGATCTAATGG
GTTGAAATGAAAAAGAAAATTATTTTCTTATGTGGAAGATCAAAATCAAA
ATCCAGCTAAAATCTTCTTATTTTGTTTATACAGATGCGGAGAAAGACAG
CTGCAGGCATTGTCACTGTTAAACAAGGTGGTAGACCAAAGAGATTATCA
CTACCTGATCAGGTAAAGCAAACTGCATCATTTACATCTTTCACGTGATT
CTTACATAGGAAGTGAAAAGGAAAATCTAAGTGTTACAAAATTACTTCTC
TCATAACCTAGGCTTCAGAAATTTCGGAGATTTTATATTCAAAGTAAGAA
TCAAAGAGCTATTATAGTTTCTATGAATCCTGATCCCCCCCAAAGAAATA
AACGAACTATATATTAGTGGTGTTTTAAGGCATATGAAGTTCTACAAGCC
AATGATCCAAATCTCAAATAATTTGACCGTGAAAAACCTGCGAAAACGAT
CGAACTATACTTAATCTCAGATAATCAATAATGTCGCATAAACAAACATA
AACAAAGATATTACATGTAAAATACCAACTCTATTTATTCTACTAGGATA
CTGATATGAAATCAAGTGAATTCCAAAGACCGATGAAAATGCGAAGTCAA
ACAGTAATGACACCAAAGACAGAATATTCTTTTGAGAATCAATCATATTC
TTCTGATTGTCAAGATGAGGTTGAGAACAAACATAGAACATTTTCAATAA
AAGAGGAAATTGAAGATCCAGAGAACGTAGAGGAAGAACTTTCTCAAAGT
GAAGCAAAAACAATGGAATAA Coding sequence (CDS) from alignment at sc0000078_pilon:192066..194736- >XLOC_032990 ID=XLOC_032990|Name=XLOC_032990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000078_pilon:192066..194736- (Clytia hemisphaerica_ch_hm2_pilon)
ATCAAATATGCTATTTCACTGGGCATCAGTGGCTCAACAGCCAGTCTCAT
GTTAACAGCTTGGTCAGCAAGCAATCTATTTGGTCGTCTAGCCTTTGGAA
GCTTTATATCCCGTTATCGCGATAAAGTCCTCATCACATATCAAATAGCG
ATGTTTCTAAGCGGAGTGGTCAGCATTGGAGCTTATTTTGCCGACAATAC
ATGGAGTTTGTTTCTCTATTGTTGTATTTATGGAATGTTGGATGGTTCGA
ATATTGGATTAGCCAGTCTGGTGACGATTGATTTGACAAGTCCACTTGAT
TTAGGAGCAGCTTGGGGTATACAACAAACGATCAATGGAATTCCAACCAT
TGCTGGTCCTGTTCTGATTGATCAAATATGCTATTTCACTGGGCATCAGT
GGCTCAACAGCCAGTCTCATGTTAACAGCTTGGTCAGCAAGCAATCTATT
TGGTCGTCTAGCCTTTGGAAGCTTTATATCCCGTTATCGCGATAAAGTCC
TCATCACATATCAAATAGCGATGTTTCTAAGCGGAGTGGTCAGCATTGGA
GCTTATTTTGCCGACAATACATGGAGTTTGTTTCTCTATTGTTGTATTTA
TGGAATGTTGGATGGTTCGAATATTGGATTAGCCAGTCTGGTGACGATTG
ATTTGACAAGTCCACTTGATTTAGGAGCAGCTTGGGGTATACAACAAACG
ATCAATGGAATTCCAACCATTGCTGGTCCTGTTCTGATTGGTGCAATGAA
CGATGCGAAGGTATTGAGTGCGAATTACATGTTCGTTTTTACTGGTGGTA
CATTCATCCTTGGAAGTATTTTCATGAACTTTGCACGCGTGTTACGAAAC
CGTGAGAAATATGTTGTTGAGGACAAAACACCATTTGATGAAGAAGTTAC
TGAACTTGCTGAAATAAGACCAAGAGCTGCAGCTTCCATTGTGCAATGAA
CGATGCGAAGGTATTGAGTGCGAATTACATGTTCGTTTTTACTGGTGGTA
CATTCATCCTTGGAAGTATTTTCATGAACTTTGCACGCGTGTTACGAAAC
CGTGAGAAATATGTTGTTGAGGACAAAACACCATTTGATGAAGAAGTTAC
TGAACTTGCTGAAATAAGACCAAGAGCTGCAGCTTCCATTATTCCACGTA
AAGCGAGTACAGCATTTGGACCGAAGAAAATTTCAGGCGAGATTCCACGT
AAAGCGAGTACAGCATTTGGACCGAAGAAAATTTCAGGCGAGATGCGGAG
AAAGACAGCTGCAGGCATTGTCACTGTTAAACAAGGTGGTAGACCAAAGA
GATTATCACTACCTGATCAGATGCGGAGAAAGACAGCTGCAGGCATTGTC
ACTGTTAAACAAGGTGGTAGACCAAAGAGATTATCACTACCTGATCAGGA
TACTGATATGAAATCAAGTGAATTCCAAAGACCGATGAAAATGCGAAGTC
AAACAGTAATGACACCAAAGACAGAATATTCTTTTGAGAATCAATCATAT
TCTTCTGATTGTCAAGATGAGGTTGAGAACAAACATAGAACATTTTCAAT
AAAAGAGGAAATTGAAGATCCAGAGAACGTAGAGGAAGAACTTTCTCAAA
GTGAAGCAAAAACAATGGAATAAGATACTGATATGAAATCAAGTGAATTC
CAAAGACCGATGAAAATGCGAAGTCAAACAGTAATGACACCAAAGACAGA
ATATTCTTTTGAGAATCAATCATATTCTTCTGATTGTCAAGATGAGGTTG
AGAACAAACATAGAACATTTTCAATAAAAGAGGAAATTGAAGATCCAGAG
AACGTAGAGGAAGAACTTTCTCAAAGTGAAGCAAAAACAATGGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:192066..194736 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 700-924:226 |
| Aaloc | 622-699:688 |
| Aaloc | 571-621:1072 |
| Aaloc | 373-570:1859 |
| Aaloc | 1-369:2672 |
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