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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:39867..42851- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032982 ID=XLOC_032982|Name=XLOC_032982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2985bp|location=Sequence derived from alignment at sc0000078_pilon:39867..42851- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGAAAATGTTTGGCTATAATCCTCAGTGGATTGATAGTATTACAGAA
TCTTCTAACAGTTTCCTCGCAATCATGCAATGGTGAATCTATCCAAGACC
TGAATGCAACGTATATCATTGGAGGTTTGTTTCCCGTCCATTATCGTGTT
TCGGAAACAAATCAATATATATTCAACATTCTATCTATTGTATGGGTCGA
AGCGTTTTTGTTCGCTTTACGTGAAATCAACAATATCAAAGATCTGCTAC
CAGGTATTAAGCTAGGATACGATATCAAAGACACGTGTAATGATGGTATG
GTTGCTGAAAATCATGTCCTTGACCTGATGACAGATCGTAAATTCTTTCA
ATCATCACATCAAGCGTTTAGTAATTGGTACGCCCCATGTGAATGTTACG
ATGAGCAACAGTCAAAGATGATTGGAGTTGTTGGTAAGATATTGTTCATA
TTTCTTGAAGTAACTTTTTAATATCTAATTTGATTTTGGCAAGGAAGAAT
TGTCTTAAGCGTTATTTTACTTTGGAAACTGAAAAATGAAAATGTTGACT
ATCCGTAATTTGAACTCGAACAGGGAATTTTATATGTTCGAATTACAGAG
AGATTCGAATTATAGAGAGTATTTTAAGAGGGTTTCTCCCTGACGGGAAC
TGGAAATAGGTTCGAATTATAGAGAGATTCGAAAAAAAATATAATAGAAG
CTCAAATAAGCAAAATTGACTGTACTTTTAAATGAATTTTGCTTCGATCT
TTTAAAAAACCTGTAGTATATTTCCTGCATTAAATTACTTTTGCAGGTGG
TGCATCATCAACGATCTCGTCCATCGCTGCCCATACCCTAATTGCTGGCA
ACATACCACAGATATCCTATGCCTCCACCAGTCCATTGCTATCCAACTCC
AGGACGTATCCCAACTTCTTGAGGACCATACCCTCAGATTTACAACAAGT
ATCAGTGGTAACTGAGCTTCTCCAAGTCATGGATTGGACTTACGTTTCTT
TGTTAGCCACTGATGATGATTTTGGGAGACTTGCTTTAAATCTTGTCCAA
GAGAACTTCAAACAGAACAATATTTGTATCGCGTTAGAATATCTGTATAG
TTCCAATCTTTCCACTGGAGATTTAGCTGAGATCACTAGAGGATTGTCTA
AATACCAGAATAGAACCAAAGTTGTTATCATATGGGCAACGGAGTTTTGG
AATATCGAAAAGATCATCACTAATACATCTAATGATGGCCTGGACGATAT
GTTATGGATAGTTTTAAGCGAAAGTTGGATAACGAAGTTCCAATCAAATC
TTCCTAGACGTCAGCATGTTATAATGTTGCAATTAGAAGATTTTCAAGTA
GAGAGTTTTGTAGATCATATGAATAAACTATCATTTGGATCAGACCTTGG
CAATATATGGATGCCACAATATTGGACAAGTCTTGGAATATGTCCTGAGA
ATGAGGGTGAGAGAACAAAATATTGTTACGATCATTGGATTCCCGAAGGT
CGAGTTTTAGGTCGAAAATACAGTGAAAACGTAATAGCGTCTGTTTACGC
GTTTGCATACGGTCTTCATAAGACATTGGATTGTAATGAAAAGAACTGCG
AACAGAAACCATTTCTTGACTATGAAGCATTGAAATTGAACATCTTGGCA
AATACATTTATACTACCGTCGACGAATTTGAGTATTGAATTTCAACCTAA
TGGAGACGTCAATGCAAACTCGTATCAAATCCGAATGTTCTCATTTGAAA
AAAATGTTCTCCTTGGCTCTTGGTCTAAAACTAACAATATTCAAATCAAT
CAAACTGAATTCTGGCTTCATTATGATAATGAAAACCAATCTTCAACCAA
CATACCAGCTACTTGCTCAACGCCTTGTAAACCTGGTTTCTATAAAAGAC
AAGAATCACAAACATGTTGTTGGAGTTGTATACAATGTCCATACGATGAA
GTCAGCTTAGGTATTGATTCGCTTGGCTGTCAAAAATGCGGACCACTGGA
AATCGCCAATAAACAACAAGACAAATGCGTACCATTACCAAATAAAGAAT
TCTCACTGACTGCACAAACCGGATTAATAATTGGGATTATTTCTCTTGTC
GGATTCATGTTCACATTATTTACGATTCTGGTATACATGATATTATGGGA
AACGCCAGGTGTCAAATCCACAAATCGTGAATTATCTTTAATACAGCTGG
TCTGTATTTTATTACTGTTCTGCTTTCCGGTCCTGAATTTATACACGCAC
AAGTCACTCTGCATTGCACGGCAAGTGATATTCGGCAGTCTTCATTCGTT
AATTCTGGTCCTTGTTTTATTAAAAACTTATAGACTATTTAAACTGTTTC
AACCACAATTCTTTAAGAAACACACACGTATGTTTCTAACTATTTCAGCA
CAAATTTTCTTCGCTTTTTTTCTATTACTCATTGAAACAACAGTCCTGGC
TATGTGGTATACAGTACATCAACCAAGTATGATTTTATACAGTAGTAAAG
GAGAAGGTGGTTATATTTACCATTGTGGCGATCACGAGAGTTACGTTTTA
TACGCTATTATCATTTACGTCATTTTACTGTCCTTGGCTAGTGGGTTTAT
AGCATTTCGAGCACGTAGCTTACCAGCCAATTTCAACGAAGCGCAATACA
TTTGGCTGGCTATGTTCACTTATTGTATTATTTGGTGTGCTTTCTTTCCA
CTCCATTTGAGTTCGAATAAACTTTACAAATCGACTATATTATTATCGAT
GAACTTAGCAAGTACTTTTAGTTTGATTGCCATTTTGTTTGGTAATAAGA
TTCGAATGTTGGTATGCTTGCCGCACTTGAACAATAGGTTGCATTTCACC
GGGTTGGCCGCTAATGCTTACATTCGAACGTTCTCGTTACGTCAGAGTGA
GTCACCGGGAAAGAACAAGAAGAAGAAGATGAGGGATAAGAAACGTGTGA
TCAGTTTTAGTTTTGAACTGGAAAATAATGTTTAA Coding sequence (CDS) from alignment at sc0000078_pilon:39867..42851- >XLOC_032982 ID=XLOC_032982|Name=XLOC_032982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5244bp|location=Sequence derived from alignment at sc0000078_pilon:39867..42851- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGAAAATGTTTGGCTATAATCCTCAGTGGATTGATAGTATTACAGAA
TCTTCTAACAGTTTCCTCGCAATCATGCAATGGTGAATCTATCCAAGACC
TGAATGCAACGTATATCATTGGAGGTTTGTTTCCCGTCCATTATCGTGTT
TCGGAAACAAATCAATATATATTCAACATTCTATCTATTGTATGGGTCGA
AGCGTTTTTGTTCGCTTTACGTGAAATCAACAATATCAAAGATCTGCTAC
CAGGTATTAAGCTAGGATACGATATCAAAGACACGTGTAATGATGGTATG
GTTGCTGAAAATCATGTCCTTGACCTGATGACAGATCGTAAATTCTTTCA
ATCATCACATCAAGCGTTTAGTAATTGGTACGCCCCATGTGAATGTTACG
ATGAGCAACAGTCAAAGATGATTGGAGTTGTTGATGCGAAAATGTTTGGC
TATAATCCTCAGTGGATTGATAGTATTACAGAATCTTCTAACAGTTTCCT
CGCAATCATGCAATGGTGAATCTATCCAAGACCTGAATGCAACGTATATC
ATTGGAGGTTTGTTTCCCGTCCATTATCGTGTTTCGGAAACAAATCAATA
TATATTCAACATTCTATCTATTGTATGGGTCGAAGCGTTTTTGTTCGCTT
TACGTGAAATCAACAATATCAAAGATCTGCTACCAGGTATTAAGCTAGGA
TACGATATCAAAGACACGTGTAATGATGGTATGGTTGCTGAAAATCATGT
CCTTGACCTGATGACAGATCGTAAATTCTTTCAATCATCACATCAAGCGT
TTAGTAATTGGTACGCCCCATGTGAATGTTACGATGAGCAACAGTCAAAG
ATGATTGGAGTTGTTGGTGGTGCATCATCAACGATCTCGTCCATCGCTGC
CCATACCCTAATTGCTGGCAACATACCACAGATATCCTATGCCTCCACCA
GTCCATTGCTATCCAACTCCAGGACGTATCCCAACTTCTTGAGGACCATA
CCCTCAGATTTACAACAAGTATCAGTGGTAACTGAGCTTCTCCAAGTCAT
GGATTGGACTTACGTTTCTTTGTTAGCCACTGATGATGATTTTGGGAGAC
TTGCTTTAAATCTTGTCCAAGAGAACTTCAAACAGAACAATATTTGTATC
GCGTTAGAATATCTGTATAGTTCCAATCTTTCCACTGGAGATTTAGCTGA
GATCACTAGAGGATTGTCTAAATACCAGAATAGAACCAAAGTTGTTATCA
TATGGGCAACGGAGTTTTGGAATATCGAAAAGATCATCACTAATACATCT
AATGATGGCCTGGACGATATGTTATGGATAGTTTTAAGCGAAAGTTGGAT
AACGAAGTTCCAATCAAATCTTCCTAGACGTCAGCATGTTATAATGTTGC
AATTAGAAGATTTTCAAGTAGAGAGTTTTGTAGATCATATGAATAAACTA
TCATTTGGATCAGACCTTGGCAATATATGGATGCCACAATATTGGACAAG
TCTTGGAATATGTCCTGAGAATGAGGGTGAGAGAACAAAATATTGTTACG
ATCATTGGATTCCCGAAGGTCGAGTTTTAGGTCGAAAATACAGTGAAAAC
GTAATAGCGTCTGTTTACGCGTTTGCATACGGTCTTCATAAGACATTGGA
TTGTAATGAAAAGAACTGCGAACAGAAACCATTTCTTGACTATGAAGCAT
TGAAATTGAACATCTTGGCAAATACATTTATACTACCGTCGACGAATTTG
AGTATTGAATTTCAACCTAATGGAGACGTCAATGCAAACTCGTATCAAAT
CCGAATGTTCTCATTTGAAAAAAATGTTCTCCTTGGCTCTTGGTCTAAAA
CTAACAATATTCAAATCAATCAAACTGAATTCTGGCTTCATTATGATAAT
GAAAACCAATCTTCAACCAACATACCAGCTACTTGCTCAACGCCTTGTAA
ACCTGGTTTCTATAAAAGACAAGAATCACAAACATGTTGTTGGAGTTGTA
TACAATGTCCATACGATGAAGTCAGCTTAGGTATTGATTCGCTTGGCTGT
CAAAAATGCGGACCACTGGAAATCGCCAATAAACAACAAGACAAATGCGT
ACCATTACCAAATAAAGAATTCTCACTGACTGCACAAACCGGATTAATAA
TTGGGATTATTTCTCTTGTCGGATTCATGTTCACATTATTTACGATTCTG
GTATACATGATATTATGGGAAACGCCAGGTGTCAAATCCACAAATCGTGA
ATTATCTTTAATACAGCTGGTCTGTATTTTATTACTGTTCTGCTTTCCGG
TCCTGAATTTATACACGCACAAGTCACTCTGCATTGCACGGCAAGTGATA
TTCGGCAGTCTTCATTCGTTAATTCTGGTCCTTGTTTTATTAAAAACTTA
TAGACTATTTAAACTGTTTCAACCACAATTCTTTAAGAAACACACACGTA
TGTTTCTAACTATTTCAGCACAAATTTTCTTCGCTTTTTTTCTATTACTC
ATTGAAACAACAGTCCTGGCTATGTGGTATACAGTACATCAACCAAGTAT
GATTTTATACAGTAGTAAAGGAGAAGGTGGTTATATTTACCATTGTGGCG
ATCACGAGAGTTACGTTTTATACGCTATTATCATTTACGTCATTTTACTG
TCCTTGGCTAGTGGGTTTATAGCATTTCGAGCACGTAGCTTACCAGCCAA
TTTCAACGAAGCGCAATACATTTGGCTGGCTATGTTCACTTATTGTATTA
TTTGGTGTGCTTTCTTTCCACTCCATTTGAGTTCGAATAAACTTTACAAA
TCGACTATATTATTATCGATGAACTTAGCAAGTACTTTTAGTTTGATTGC
CATTTTGTTTGGTAATAAGATTCGAATGTTGGTATGCTTGCCGCACTTGA
ACAATAGGTTGCATTTCACCGGGTTGGCCGCTAATGCTTACATTCGAACG
TTCTCGTTACGTCAGAGTGAGTCACCGGGAAAGAACAAGAAGAAGAAGAT
GAGGGATAAGAAACGTGTGATCAGTTTTAGTTTTGAACTGGAAAATAATG
TTTAAGTGGTGCATCATCAACGATCTCGTCCATCGCTGCCCATACCCTAA
TTGCTGGCAACATACCACAGATATCCTATGCCTCCACCAGTCCATTGCTA
TCCAACTCCAGGACGTATCCCAACTTCTTGAGGACCATACCCTCAGATTT
ACAACAAGTATCAGTGGTAACTGAGCTTCTCCAAGTCATGGATTGGACTT
ACGTTTCTTTGTTAGCCACTGATGATGATTTTGGGAGACTTGCTTTAAAT
CTTGTCCAAGAGAACTTCAAACAGAACAATATTTGTATCGCGTTAGAATA
TCTGTATAGTTCCAATCTTTCCACTGGAGATTTAGCTGAGATCACTAGAG
GATTGTCTAAATACCAGAATAGAACCAAAGTTGTTATCATATGGGCAACG
GAGTTTTGGAATATCGAAAAGATCATCACTAATACATCTAATGATGGCCT
GGACGATATGTTATGGATAGTTTTAAGCGAAAGTTGGATAACGAAGTTCC
AATCAAATCTTCCTAGACGTCAGCATGTTATAATGTTGCAATTAGAAGAT
TTTCAAGTAGAGAGTTTTGTAGATCATATGAATAAACTATCATTTGGATC
AGACCTTGGCAATATATGGATGCCACAATATTGGACAAGTCTTGGAATAT
GTCCTGAGAATGAGGGTGAGAGAACAAAATATTGTTACGATCATTGGATT
CCCGAAGGTCGAGTTTTAGGTCGAAAATACAGTGAAAACGTAATAGCGTC
TGTTTACGCGTTTGCATACGGTCTTCATAAGACATTGGATTGTAATGAAA
AGAACTGCGAACAGAAACCATTTCTTGACTATGAAGCATTGAAATTGAAC
ATCTTGGCAAATACATTTATACTACCGTCGACGAATTTGAGTATTGAATT
TCAACCTAATGGAGACGTCAATGCAAACTCGTATCAAATCCGAATGTTCT
CATTTGAAAAAAATGTTCTCCTTGGCTCTTGGTCTAAAACTAACAATATT
CAAATCAATCAAACTGAATTCTGGCTTCATTATGATAATGAAAACCAATC
TTCAACCAACATACCAGCTACTTGCTCAACGCCTTGTAAACCTGGTTTCT
ATAAAAGACAAGAATCACAAACATGTTGTTGGAGTTGTATACAATGTCCA
TACGATGAAGTCAGCTTAGGTATTGATTCGCTTGGCTGTCAAAAATGCGG
ACCACTGGAAATCGCCAATAAACAACAAGACAAATGCGTACCATTACCAA
ATAAAGAATTCTCACTGACTGCACAAACCGGATTAATAATTGGGATTATT
TCTCTTGTCGGATTCATGTTCACATTATTTACGATTCTGGTATACATGAT
ATTATGGGAAACGCCAGGTGTCAAATCCACAAATCGTGAATTATCTTTAA
TACAGCTGGTCTGTATTTTATTACTGTTCTGCTTTCCGGTCCTGAATTTA
TACACGCACAAGTCACTCTGCATTGCACGGCAAGTGATATTCGGCAGTCT
TCATTCGTTAATTCTGGTCCTTGTTTTATTAAAAACTTATAGACTATTTA
AACTGTTTCAACCACAATTCTTTAAGAAACACACACGTATGTTTCTAACT
ATTTCAGCACAAATTTTCTTCGCTTTTTTTCTATTACTCATTGAAACAAC
AGTCCTGGCTATGTGGTATACAGTACATCAACCAAGTATGATTTTATACA
GTAGTAAAGGAGAAGGTGGTTATATTTACCATTGTGGCGATCACGAGAGT
TACGTTTTATACGCTATTATCATTTACGTCATTTTACTGTCCTTGGCTAG
TGGGTTTATAGCATTTCGAGCACGTAGCTTACCAGCCAATTTCAACGAAG
CGCAATACATTTGGCTGGCTATGTTCACTTATTGTATTATTTGGTGTGCT
TTCTTTCCACTCCATTTGAGTTCGAATAAACTTTACAAATCGACTATATT
ATTATCGATGAACTTAGCAAGTACTTTTAGTTTGATTGCCATTTTGTTTG
GTAATAAGATTCGAATGTTGGTATGCTTGCCGCACTTGAACAATAGGTTG
CATTTCACCGGGTTGGCCGCTAATGCTTACATTCGAACGTTCTCGTTACG
TCAGAGTGAGTCACCGGGAAAGAACAAGAAGAAGAAGATGAGGGATAAGA
AACGTGTGATCAGTTTTAGTTTTGAACTGGAAAATAATGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:39867..42851 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 436-2622:2188 |
| Aaloc | 1-432:2986 |
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