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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:52681..56712+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032976 ID=XLOC_032976|Name=XLOC_032976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4032bp|location=Sequence derived from alignment at sc0000078_pilon:52681..56712+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTCTCCTTTCAGGGTTCATCTTGAGTGCGCTTTCGTTCATGATTGCACC
GAACATTTATTACCATGAAATTTCTGCGGGTCTTCTCATCTTCGGAGCTG
GGCTGGaaggtaaaaattgaaaataaattcaattaCATCAAAGCTTATTA
GTTTGTAtacaagaaataaaattttatcatccCTCCCAAAAAACTCTACA
TCTACCATTTTAAAATAGTAGTGTATTTTGACAAAcgctttttttgagaa
aaaaagattgtTAATAATAATgccttgttggaaagataacttTGAATGCT
TCGATTAAGGCATTTAATTTGTTCAAAAAgcattttgtattttctaaaaC
TGCATCGACCTTTATCACatttaatcttaatttttgaatAGTTTGAAGAG
ATTTTAAAGCTTCAAATTCGTCCATTCAAAGTTTATCtttctatcaaaat
caaaacgtaTCGAGTGTCAATTGGTCTTACATTATGTTATGTTTAAACAT
GTAGGTATAGCATGGGCGGGTTTTGGCGTCAACCATTTAGATATTGCACC
CCAATATGCCGCCATTTTGATTGGGATAACGAACACGTGTGCGACGGTGC
CGAACATTATCGTTCCAATTGTTGTTGGAATCATCAGTAAAACTGGAGTA
AGAATTCATTCtttgtttgaatttcttttatgttcactgaaaaattaaat
aaaaaaatgagcGTTGTATCAAGACAAAATTGTTAAACTTTTATAACTAC
TCCAAACTAATCCGACCTGAtgtaaaattcaaatcaaatttaaagAGCGA
GCTACTTAGAAAGGGGTTTCATGCCTTATGACACGCTAAGTATCAAAACT
CTACCCACTGCACTAGAAGGATTGCTCAAAAATTCTCTCCCAAGAAAACT
CTAAAAATCTCACTGGAAGTCTCACTCCAACagtgctataggcggccact
agtgacccccaccgggaattgcttattaataggtttaaacataatagact
accctgagtatcagaggttaagttttcaaagaaaatagtaacctctgaag
acaaataatagaaattttatcgcgcatgtgtcaatctaatcactgtagaa
aaaatcaaagatgaagagcaaatattaccatattaatgtctagcagactg
tatcagtatgcagtttactatttacgaattccccagaaacctccaagtgt
agttgaaatgagtttatttcgaaagaaatcttttacatgatccccaaatg
tataacagtaattactaaacttttaattatggaaatgtcactttaattga
atcgaaataatagacagactttatgttatgattctctatcactgactctt
tttacaaagcattgatgactttttgtaagttgtgttttcaacgacgggaa
taaaaatatcgactatgacgctcatccaagatcttggatggtcgtcatgg
ttacttttgtcttcgctgattgcgcgatgaatagaatctcgattcgtcgg
cacagcgtaaatacactataagcataacgtttataagcatactgaagctc
aaatttccagaaaaattaagcatatgctaagcataccttgaggctcagcc
aaagaaatttttagaatcataatttccaaaacttcagaaaataacagaag
aatgaagaagagaactacaaacaaaattggtgaatttatttttgtttaat
ctcttataaataacacaacttaTAATAACTacaacattcgaaaacaatag
aatgtcttcatttctctcaagattaaagataggggaaaatgcgcgaaatt
ttttaccccccttgttgtgcgcagatttgtaatacttgcgcagatttgta
atacctgcgcagatttgtaatactttctgcgtagatttgtaatacctgcg
cagatttgtaataaactttgcgcaaatttgtaatacttgagctgcgcaga
aatgtaatacttctctgcgcagatttataatttggaatttagatttttac
ttcGGCATATGTTTCCCACgaagaaaagtttcgaaaaaaagacttaaaaa
ataatcagaaaatcacaCAAAGGTTGTATATCTTTAGTATgaacattaac
tttataagaaacgaatcaatatattttaatctaatgaaaattggcttttg
gcagttggttctttcaatacaaacatggattgggaataattttaagcatt
ttcatttttcttataagcatcaactttataagaaacgaatcaatatcttt
caatctaatggaaattggctttcggcagttggttctttcaatacaaacat
gggattttgaatacaatttcaatattttcattttttctataagcattcaa
ctttataagaaacgaatcaatatctttTAATCTAATGGAAATTGTTTCAa
tcatgttttattttttttcatctttatgtattttttctatctaacaacaa
caaaaaacataccGAAGCTTCAACCatcaaactctttttgaaagaaagtt
aaCTCATAATAATTTCACTTGAGATATCATGCTGGAATGTAATGTAGGTG
CTATGAAAGGTTATAAAAGAAATTCAGTCAGAGGGGACAGGTTTCCTAGC
TAGGTAAAAGGTGGTTTTAGAGCAAATCAATGTTTTCTTATCATATCATC
TTATAAATTGTTCATCAACTTTGGTACTGCCTcttgaaatgataaaatgt
tgacaaaaatatttttatatcattaattattttttcataacaaagtgctt
ataaaaataaatatgttcgtGTTATTATTCGAACCTTGCTcacttcgaaa
taaacaattaccgacaagaaataattttcattttacgagttattgattag
tttcttataaaagcagtgcttacaaaaaataaatatgttcgtGTTATTAT
TCGTACCTTGTTcacttcgaaataaacaattaccgacaagaaataatttt
cattttacgagttattgattagttttttataaaagcagttctttTAATGT
TCGTGCTATTCTCATAAACAATTTATATATTACcagataaatttcttata
aaagcactgcttagaaaagaaatattaattgattatttatttattcgaTG
TGCTCAATAAACACAACTTTATTTGGGTATtattttctaagtatttttta
atgtattttgtTCACAGAAAAGAATTTGtttaccaatgaaaatatcaatt
ccaaattacaaatctgcgcagagaagtattacatttctgcgcagctcaag
tattacaaatttgcgcaaagtttattacaaatctgcgcaggtattacaaa
tctgcgcagaaagtattacaaatctgcgcaggtattacaaatctgcgcaa
gtattacaaatctgcgcacaacacccttcataatttttttaccaagcata
gggttaagcatagtcgaggctcaaaattgagctttgcttaagcatagtga
gcttcagccgaaatttaccgtatgcttataaaacgaaatgagtgtatatg
attttgagctgtgcttttcacggtcataatagacaacattcacaaaatat
gtttatcaatagagattttaaataaaagaatgtttaaaacacagctgatt
ggcttaggtttcgaaactttcgattgtttcattaaaacctcagtgcgcat
gcgatttatctggagaatttcaatattcaaaacaagagcagtgctcatag
cccgaagagtaggagttttacgctcgaaacgaaggaggatatgacgtagc
ctaagaaaaatactgattcttttttatgtttaattttAGGAGCGGAGTGA
CTGGATGCTGGTCTTTTACATCTCTGGATTAACACTCATTGTGGGTACAT
CATTTTATATTGTTTTTGGTTCTGGTGAAGTGCAACCGTGGGCAGGTGGC
GTGGAAAACGAGGAGGGCGAAAAGGAAAGCTTGTTGAATGACTTTAGTAC
TAAAGAGGATATGGATGAAATAGAAAATGATAATGAAACCAAAGATGttg
caaatgaaaacaaaatcgaTAAAGAATCATAG Coding sequence (CDS) from alignment at sc0000078_pilon:52681..56712+ >XLOC_032976 ID=XLOC_032976|Name=XLOC_032976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=990bp|location=Sequence derived from alignment at sc0000078_pilon:52681..56712+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTCTCCTTTCAGGGTTCATCTTGAGTGCGCTTTCGTTCATGATTGCACC
GAACATTTATTACCATGAAATTTCTGCGGGTCTTCTCATCTTCGGAGCTG
GGCTGGaagCTTCTCCTTTCAGGGTTCATCTTGAGTGCGCTTTCGTTCAT
GATTGCACCGAACATTTATTACCATGAAATTTCTGCGGGTCTTCTCATCT
TCGGAGCTGGGCTGGaagGTATAGCATGGGCGGGTTTTGGCGTCAACCAT
TTAGATATTGCACCCCAATATGCCGCCATTTTGATTGGGATAACGAACAC
GTGTGCGACGGTGCCGAACATTATCGTTCCAATTGTTGTTGGAATCATCA
GTAAAACTGGAGTATAGCATGGGCGGGTTTTGGCGTCAACCATTTAGATA
TTGCACCCCAATATGCCGCCATTTTGATTGGGATAACGAACACGTGTGCG
ACGGTGCCGAACATTATCGTTCCAATTGTTGTTGGAATCATCAGTAAAAC
TGGAGAGCGGAGTGACTGGATGCTGGTCTTTTACATCTCTGGATTAACAC
TCATTGTGGGTACATCATTTTATATTGTTTTTGGTTCTGGTGAAGTGCAA
CCGTGGGCAGGTGGCGTGGAAAACGAGGAGGGCGAAAAGGAAAGCTTGTT
GAATGACTTTAGTACTAAAGAGGATATGGATGAAATAGAAAATGATAATG
AAACCAAAGATGttgcaaatgaaaacaaaatcgaTAAAGAATCATAGGAG
CGGAGTGACTGGATGCTGGTCTTTTACATCTCTGGATTAACACTCATTGT
GGGTACATCATTTTATATTGTTTTTGGTTCTGGTGAAGTGCAACCGTGGG
CAGGTGGCGTGGAAAACGAGGAGGGCGAAAAGGAAAGCTTGTTGAATGAC
TTTAGTACTAAAGAGGATATGGATGAAATAGAAAATGATAATGAAACCAA
AGATGttgcaaatgaaaacaaaatcgaTAAAGAATCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:52681..56712 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 253-495:3790 |
| Aaloc | 112-252:507 |
| Aaloc | 1-108:1 |
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