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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:47739..52371+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032975 ID=XLOC_032975|Name=XLOC_032975|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4633bp|location=Sequence derived from alignment at sc0000078_pilon:47739..52371+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCAAGATGAGCGAAGAACAAAATGAACAACAGAAGACGCTATATCA
TCAGAAGGCTCACAACATAGAAGCTGAAACTCCTATGCCACTATCAGATA
ATCTGGAAGTTGATAAAAGAGTGACTGCAAATGGGTCTAAAAAACAGCCT
CTATACCATCAGAACTCTTTTGAGGATGGTGGATCTACGGCTAGTGATAT
TTTACATTTATACGGGAAGAAGAATACTGCTCGAGTAAAATTGAGTATAA
GTTACAGTGAGGGCGGGACGAGGAGTTATTTAGAACAACCGCCCTCCATC
GAAGACTGTCTCGAAACGAATGATGATTTTCGATTTCAATCGAGGACTTG
CAAATGCTTACCAAAACGTTATGTGTTGGCTTTGTTGAGTTTCTTTGGGT
TTTTCAATGTTTATTGTTTACGTGTTGATTTGAGTGTGACGCTGGTTGCC
ATGACATCAAATCATACACGAGTGAGGGCTGATGGGACGGAATATACGGT
AAGTTGGAGTACAGTCTAATATTTTTCTGTGACTTGATTAAATGTTTTCA
GTGACAAACTTACAAACGCCCATTTATTTGATAACGATAAAAATATCGGG
TTATGTGTAGGTAAAATTCTAGAGgccatacaataaaaaaaacaatgagt
tttgagtgtttttattatcacctttattactttttaggCGTTGGCTGAAT
TTCAATGGAACAGAGAACTTCAAGGTAAAGCCCATGAATCTTTTCTGTTA
GGCGGAAACACTTCTGCTTAGCCTAcataaaaaattcttataagagATAC
AGGCCTACTACTCAGGATGTAAGTCCACGGAATTCTAGAAGTGTCCAcgg
aaataattaaaaactacAATCCCAACCGTAATATTTGGCACTAAAGGTGA
ATTCACTCAAATTtgaaaaccgcaagtgatttttaagtgctttaaaacat
ttaaaatacggttggaaagtagagttttaacatgagagtTAAGACTTAGG
ACCATAGGATCTCAGGACcataggatctcaggatctaaaagctcaaaaat
gttccaataaggctgaaaatatagcctggaagcaacttaacccctcccaa
atgaaaaaattcaatgaaacaaagcggaagtactgaaactgcaattctcg
ccctatctttaaattctgaaaagcaTTAAAATacccaatatatttcggcg
ccgtTTGTATATCTGTATACAATCCAATTTCAGGTCATTTATTAGCAGCA
TTTTATTATGGTTACATCATCACACAAATTCCTGGTGGTTATATAGCCGC
CCGTTTTGGCGGGAAAAATTTGTTCGGATTCGCCATCTTGATTAGTGGCT
TTTTGACGCTCCTGACACCGCTGGCGGCGAAAGAGCACTGGGTGCTGTTA
TTTGTGTTGCGGCTAGTCGAAGGACTTTGTGAGGTAAGGAGAGCTTTATT
GGTCAAAAATGACGAGGTGTGAAAAGTGTTGGGAAATTGCGTAATTTAAC
AAAAATCAGACACTATAGgctatttcacagtcgaaatggatcatgggtaa
tcaggactgattgcgcctccgtaacggctttctgttggctagacgcaata
atcttcaaaaaatttcaaaactctggaccaatagtaagtcgtcattagca
cgcagtggtcctgattacccattacgctttgcgactgtgaaatggcctat
agaggaaaacattcgaatttgaaaCGGTCATTACTTccacaaatcgaatg
ttttattaAAGACAGTAATGGTTGATTTTATTTGACATATCCTTCAAACT
TTTAAATTAATAAGCTGTTATAAGGGAAATGGAGGCAATCTAGCTATCTA
GCAAAATACGCCAAAGAATGTTTACAattcaataaatcaaaatacATGCT
GGCACGGTTAAAGCGGATAAAGCACCTTTTTTAATTATAGGGTTGCATTT
ACCCGGCAATGTATTCGATATGGAGTCGTTGGGCGCCACCCATGGAAAGG
GCGGCTCTAGTCACCATACCTCATTCAGGTAAGAGGGAAATATGGATGGA
ATTCTTCAGCAAAATGTTATCAATGCCAAAAATTGCCTTGTTTGCCCCTC
AGTAGAATTTGAACTTTACATTCAAACTAATGCACATGGGAAGTCATTGT
GCAACAAACAAgtcctaaagtctgtccagatataattgacagtggaaaca
agaatgcctgtaacttttaatagtgaaatataattccaaaattttttttt
gcttgttttagagattcaaaagcgctatatttgaatgtattttttgttga
aaaattcgcgagttttagcggttaaatttgcgattgcaaatattgagctt
tttttctttttatgctataacgttcatttttaaactagtggtagttcaac
cttaggtaaAGAAGGTTGTTGAATATCAAGGCAAacggaaaagtccttcg
gaagatatgggacccgaaataccccttggtagcacttttctgtgaaatat
caaatctccaaatttttactaaaaacggtggttatgttatcttttttgaa
cagtgaaattaaaagtttttggaattatatttcactattaaaagttacag
gcattcttgtttccactgccaattatatctggacagccTTAATTTCAATA
AGGCAACAAGGTTTTTAGATCTTTCCCAATCGGGGCAATTGGGAACTTCT
TTTGGTTTCTAGTTTAGCAGGTACAACCatcaaacaaaaactaaaaaaaa
agttttttagccTAGGGTATCACCTAATTTATGACTGCTCCTTCAAAATT
TCCGTTCTATCTTTATTTAATCATAGGATCGTATGCAGGATCGGTGGCAG
GAACACTACTTGCTGGATACCTCTGTGAGGTTTGTGGATGGAGCTGGGTC
TTCTATTTCTTTGGTAAGTAAAATTATCACACATATATAATCGAAATTGA
ACCTGGGGGTGCACCCGATCTTAAAACTACCGTATGCACTGAAAAAACTT
ATTCAAGATTGAATctttacagtgcagagaaaatttagccaaaactGAGT
AAGTTggtcgaaaaatggacccttaTGGTGTATTTTACTTCAGAAAATag
tcagattttccaaaattttcataTTACACCCCTACAGTGCACGTTCTCAC
ATTTCGACCCttgcactttgggaagcctgCATCGGGGAaaacagaacata
ttttttttaccaaacCAGAAAGATaatggaaaattgaaattgaagtaGCG
AGTTCAACTATATTGGTATATGTTTTGTTTCCACGTATATGGAAATTTTT
AAGGATTTTCCAGGAACGTTTTGAAGTTTAGTAACGTTTCTTTCACTCCA
AATAAATGGATACGACTGAAAGCCCAGTGTAAAagataaattatttcatt
ttcaggtaTTTTAGCATTAATTTGGGTAGTTGTATGGCAGATCCTTGCAT
CAGATTCACCAGAAGACGATAACCATATATCAAATGTTGAACGAAGAATG
ATTTTAGAAAGTTTGGAATCAGAGCACACTTCACAAAAGGTAAGAGACAG
CGATAAAATGCGTATTAGTGAGGGGTGTGGTATAAGATTTAGTCCCTTCC
TATGAATATTACCGCAGAAATCATTTTTTGCTGATAGAATTTAAAACACA
AGTCCGCCATTTGGTTCCAAGACGACAAAAACCTAGCTTTTGTTACCTCA
GTTCGGAAAACAAGGTATAGAGTTTTTCATGATTTGCTGAGTTACAAACT
TTCCGTCAGACGGaaaaaaaCGTTCGATTTTCGTAAGCGATCACCTTTAC
atattcgaacgtttgcttccataatggtggaaattacgtaactttaaAAA
ACATGAAGAACTTCTATATACGGCATAAACCGTACATGCGGGATAAGCCG
AGTTTGGTCTTTCGTTTTCATTAGCTCACAATTCAAGGTGACACTAAAAT
CTTACCTTTACTATGAACACAACTTTTCATTTCAGCTTTCAGATGATCTT
CCATGGTTTTCAATCTTCACTTCTTTACCTTTCATTTCAATTGCGGTGGC
CCACACGTGCGAAGGATGGGCATTCGGTTTGATTCAAACATCCTTCCCCA
AATATTTGAGTGAAGCTCTAAattatagaatttttaaagTAAGTTAACAA
CTGTTTATAAGAGAACTTTAGGTCTCTCTTCATAATTCTTTCTGCTGTTT
ATTTTGGTATTGAACCGACGTTCAGGTACGGCATAATCTCCTTATGATGG
ACAGAGATTAGCGCTGATTCCAGTGGTGATTCTGAGGGGATTCATAATTT
ATGACGGGGGGAATAAACACTCCCCATCATAAATTTTGAGCACCCCTTTG
ATCCGCTGCAGGGTTCGATGAAAATTATGTATCtgttatttttttggtaa
aacttcattctttgaaatggaCCAGGTTTTGTCGCGTCGCATAAAAGAAG
TCACGGGTCCTATAAGTGTTTGCTCTCtactaaatattttcaattatttt
ttctcGTCATTCCCAGTCCGGTCAATACACCAGCCTGATATATTTCCTGA
TGGGATTTTCAACATTCGTCTCTGGTCAACTATCTTCATGTTTGAGAAGG
CGAGGTGTTTCGGCAACAGTTCTACGTAAAGTA Coding sequence (CDS) from alignment at sc0000078_pilon:47739..52371+ >XLOC_032975 ID=XLOC_032975|Name=XLOC_032975|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2628bp|location=Sequence derived from alignment at sc0000078_pilon:47739..52371+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCAAGATGAGCGAAGAACAAAATGAACAACAGAAGACGCTATATCA
TCAGAAGGCTCACAACATAGAAGCTGAAACTCCTATGCCACTATCAGATA
ATCTGGAAGTTGATAAAAGAGTGACTGCAAATGGGTCTAAAAAACAGCCT
CTATACCATCAGAACTCTTTTGAGGATGGTGGATCTACGGCTAGTGATAT
TTTACATTTATACGGGAAGAAGAATACTGCTCGAGTAAAATTGAGTATAA
GTTACAGTGAGGGCGGGACGAGGAGTTATTTAGAACAACCGCCCTCCATC
GAAGACTGTCTCGAAACGAATGATGATTTTCGATTTCAATCGAGGACTTG
CAAATGCTTACCAAAACGTTATGTGTTGGCTTTGTTGAGTTTCTTTGGGT
TTTTCAATGTTTATTGTTTACGTGTTGATTTGAGTGTGACGCTGGTTGCC
ATGACATCAAATCATACACGAGTGAGGGCTGATGGGACGGAATATACGAT
GAGCAAGATGAGCGAAGAACAAAATGAACAACAGAAGACGCTATATCATC
AGAAGGCTCACAACATAGAAGCTGAAACTCCTATGCCACTATCAGATAAT
CTGGAAGTTGATAAAAGAGTGACTGCAAATGGGTCTAAAAAACAGCCTCT
ATACCATCAGAACTCTTTTGAGGATGGTGGATCTACGGCTAGTGATATTT
TACATTTATACGGGAAGAAGAATACTGCTCGAGTAAAATTGAGTATAAGT
TACAGTGAGGGCGGGACGAGGAGTTATTTAGAACAACCGCCCTCCATCGA
AGACTGTCTCGAAACGAATGATGATTTTCGATTTCAATCGAGGACTTGCA
AATGCTTACCAAAACGTTATGTGTTGGCTTTGTTGAGTTTCTTTGGGTTT
TTCAATGTTTATTGTTTACGTGTTGATTTGAGTGTGACGCTGGTTGCCAT
GACATCAAATCATACACGAGTGAGGGCTGATGGGACGGAATATACGgCGT
TGGCTGAATTTCAATGGAACAGAGAACTTCAAGgCGTTGGCTGAATTTCA
ATGGAACAGAGAACTTCAAGGTCATTTATTAGCAGCATTTTATTATGGTT
ACATCATCACACAAATTCCTGGTGGTTATATAGCCGCCCGTTTTGGCGGG
AAAAATTTGTTCGGATTCGCCATCTTGATTAGTGGCTTTTTGACGCTCCT
GACACCGCTGGCGGCGAAAGAGCACTGGGTGCTGTTATTTGTGTTGCGGC
TAGTCGAAGGACTTTGTGAGGTCATTTATTAGCAGCATTTTATTATGGTT
ACATCATCACACAAATTCCTGGTGGTTATATAGCCGCCCGTTTTGGCGGG
AAAAATTTGTTCGGATTCGCCATCTTGATTAGTGGCTTTTTGACGCTCCT
GACACCGCTGGCGGCGAAAGAGCACTGGGTGCTGTTATTTGTGTTGCGGC
TAGTCGAAGGACTTTGTGAGGGTTGCATTTACCCGGCAATGTATTCGATA
TGGAGTCGTTGGGCGCCACCCATGGAAAGGGCGGCTCTAGTCACCATACC
TCATTCAGGGTTGCATTTACCCGGCAATGTATTCGATATGGAGTCGTTGG
GCGCCACCCATGGAAAGGGCGGCTCTAGTCACCATACCTCATTCAGGATC
GTATGCAGGATCGGTGGCAGGAACACTACTTGCTGGATACCTCTGTGAGG
TTTGTGGATGGAGCTGGGTCTTCTATTTCTTTGGATCGTATGCAGGATCG
GTGGCAGGAACACTACTTGCTGGATACCTCTGTGAGGTTTGTGGATGGAG
CTGGGTCTTCTATTTCTTTGgtaTTTTAGCATTAATTTGGGTAGTTGTAT
GGCAGATCCTTGCATCAGATTCACCAGAAGACGATAACCATATATCAAAT
GTTGAACGAAGAATGATTTTAGAAAGTTTGGAATCAGAGCACACTTCACA
AAAGgtaTTTTAGCATTAATTTGGGTAGTTGTATGGCAGATCCTTGCATC
AGATTCACCAGAAGACGATAACCATATATCAAATGTTGAACGAAGAATGA
TTTTAGAAAGTTTGGAATCAGAGCACACTTCACAAAAGCTTTCAGATGAT
CTTCCATGGTTTTCAATCTTCACTTCTTTACCTTTCATTTCAATTGCGGT
GGCCCACACGTGCGAAGGATGGGCATTCGGTTTGATTCAAACATCCTTCC
CCAAATATTTGAGTGAAGCTCTAAattatagaatttttaaaCTTTCAGAT
GATCTTCCATGGTTTTCAATCTTCACTTCTTTACCTTTCATTTCAATTGC
GGTGGCCCACACGTGCGAAGGATGGGCATTCGGTTTGATTCAAACATCCT
TCCCCAAATATTTGAGTGAAGCTCTAAattatagaatttttaaaTCCGGT
CAATACACCAGCCTGATATATTTCCTGATGGGATTTTCAACATTCGTCTC
TGGTCAACTATCTTCATGTTTGAGAAGGCGAGGTGTTTCGGCAACAGTTC
TACGTAAAGTATCCGGTCAATACACCAGCCTGATATATTTCCTGATGGGA
TTTTCAACATTCGTCTCTGGTCAACTATCTTCATGTTTGAGAAGGCGAGG
TGTTTCGGCAACAGTTCTACGTAAAGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:47739..52371 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1198-1314:4517 |
| Aaloc | 1045-1197:3986 |
| Aaloc | 913-1044:3408 |
| Aaloc | 826-909:2829 |
| Aaloc | 736-822:1941 |
| Aaloc | 538-735:1236 |
| Aaloc | 499-534:688 |
| Aaloc | 1-498:1 |
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