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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000182_pilon:161274..164619- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032918 ID=XLOC_032918|Name=XLOC_032918|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3346bp|location=Sequence derived from alignment at sc0000182_pilon:161274..164619- (Clytia hemisphaerica_ch_hm2_pilon)
AACTTTCGTTTTAAGTTTGTTTTACATTTCTTTTTTTCAGTTTATCAAAT
TAAAATGAATACCAACTGGAAATATGATGACTTACTTAAGGGAAAATTGG
AGTTGTATGTTGCTCAATGTTTGAAACGAACTGAGATTGTTGAACTTATG
AAAAAAGAATTTGGCAACTATCCTTGGAGTTTGAGTACTCTAACCAGGAG
ATTCAATCATTTTGGAATTAGATATACTGATACTGAAGTTCCTGTCGAGT
CTGTCAGAGAAGCTGTTTCAACTGAACTTCGAGGTCCAGGGCGACTTTTG
GGCTACAGAGCCATGCATAAAAAACTACGTGTTGTTCATGGTTTGAAAGT
TCCTAGGAGTCTTGTTCATGATGTTATGTTTTTGGAAGAAAGTCAATTAC
TGAAGGACAGAAGACCCTGTCAGAAGAAAAAGAGAGTGAAGGGTCATTTT
GTATCAAATGGACCTAATTGGGTACACTCCTTTGATGGCCATGATAAGCT
TATGGGCTATCAGAACAGCACCTTCCCTCTAGCTGTGTATGGCTGTATCG
ACACTGCTAGTCGAAAGATACTTTGGCTCAAAATTTGGACTTCTAACAGC
GACCCAAAGCTTGTTGGTAAATGGTATCTTCAACATATCATTGAGACGAA
AAGGATTTCAAATATGGTTCGCCTTGATAAAGGTACTGAAACAGGTGATC
TTGCGGCTATTCATTGTTTTCTGCGTTCCCGTTGTGACGAAAACTTGGAA
GACCCTTCATCTGTGATACACTATGGTCCATCAACCTCAAATCAGGTACT
TTATAGGATTAATTTAAGAAACAACAATTGCGAAGTAAAACATCATCTTT
TGTCTGAGGTTGAAAACGCAGAAATACTACAATTAAATAGATTACACTTT
TTTATAAGGACACGAAAAGCCTTCAGATGTTCTAGATTTTTTGAACTTTC
AGCCTAACAACGTTCTTAAAATGTTCTTATTTTTGGAGGTTTTTATTTCC
TAAGAAATTGCATATTTTGTAGTCTTCAAAGCCTTCAAATGTTCTTGCTA
TGTACTCCTGTGTACTAATTTTTTTGGCCCTCAAAGCCAAGAAAAAACCC
GTCAATCTCATTTGAAGACTACAAAATATGCAATTTCTTAGGAAATGGTA
CCGAAATACTAAAAACATTTCTACAATCATTTTTGGCTTTCCTCAGAGCG
TTTTTGAAGGAAATTGCACTTGAAATGTAAGAAAATATTGCTCGTGTAGC
CTTAGCTGTCATAAAGTTTGTGTAATTTGTAACAGGGTATTTAAGAGAAG
GTCAGACTTTGGAGTAAACTGTAGATTGTGTTCTTTGGAGTAAACTGTAC
ATTGTGTTACTGCTCATTTTGAAGGAGATAACAACCTCTCATTTTGTCTT
CATCAACTGTTTTTTTGAAACTCAAAACCAATTTCAAAATGTTTAAATAC
ATATGTTATTCTCTTTGGTTTATGAAATATTTAAAACACTTTTTTATTGG
TATAGATTGAGCGATGGTGGAAAGAACTACATGAAAGACTAGAGAAATTC
TTCAAAGGTCAACTCCTGTTCTTAAAATGTGGCGGACATTATGATCCAAG
TTGTGAACAAGACAGGTAATTTGCTTTACATCAATCTTATTTTCTGCATG
CAATAATTGACCAAAGATGAATATTAAGATCCGATAACGCTCCGCAACGC
ATACGTCAAGTTATTGAGGTTCAAGTTATTGTTTCATAATGTTCAGTGTT
TGATATAGAAATATCTGTTCGCCTTTTTAGACACCATGTCTGCAAACTGT
GGCAAAAACTGTTAAAATTTAAAAGAGTTTTGACTTTTGATGGTACCATT
CAGTATGCTTTTGTACTTTTAGGATGATTTTAGCCTATATCATGATCCCA
ATCCTCCAAGCCGAACTTAACACATTCAAAGATGTCATCTGGAATTGCCA
TCGCATTAGATATCAAAAAGACCAAGTTTTACCAGACGGTGTTCCCAACC
ACATTTATACCGTACCTGAGGTGCATGACCTTGTTGAATGTGGTAAGTTC
CAGTCAACTTTTATTCGATTATTGATGTCTTCAGCTCAGTTTTTGCGAAG
TTAATCTGTGGCAAATCTTTTTTACAATACTTAGGTATTTGCTTCCAGGC
ACATACGCTAATCGTTGATCTTTACAGCGTAATTTTGATGAACCAGGCAT
AGTGTCCTTCAGGGTCTCTTCCCCCCATGCCTAGAATGAAAATTTTCCAT
CCCCCCCCCTCATTTTTCCCCACCCTGCCTCCAAAGATTTTTCTGTCCCC
CCCCCTCAAGCATAAAATTAAAAAGCTGTAATTTGATGAACTTAACGCTT
ATTGTTTTCCCTAAGTTAGTTCTAATTCAAGAATAAATGGAAAGGATGGT
TGTTTTTAAACCATAATATTAATAAAACTAAGCATTATGCTATATCATCT
CATAAAACCAGTTGTTTTTCAATTTTGAATTGATTTTGGTGAGTCCCCCC
CCCCATGCCTAGAGTGAAAATTTTCCATTCCCCCCACCCTGGCTTCAAAA
AAAATTCTTTCCCCCCTATACGTCCTTTTGACCTCAAAACCCATCCCCCC
CCCTGAATCCAGGGGGGGAGGACACTATGCCAGGTACACGCTTTTTTTTA
TAAGAATAGTGAACTTTGGATGAGGGTCAAATATTCTTAAGAAATTGCCA
AAATTGAGGGTGAAATAATTCTTAACGTATTCTTACTTTTTTAGACTTGA
CTTTTTTACAAACACGAGAAATGATTTTTTGAGAATTTGGCTTTTTGAAG
CTAACATTACATTCAGCCTCAAAGTTTAAATTCAAATCTAACAAAGGAAG
CAGTTTCTTTCTGATAACCAAATAAAAATGACTACCCAAATTCTGTGTAA
CTCACACTGAGGGTATTCATAGAGTATTCTTACGATTTGGCCAATTTTCA
CCCTGATATTCTTATATAAAAAGCGTGTAGCATAAGTTTTTACTAAACCT
CGTAAAGAAATTTCACTTTAGTAATGAAACATTTTGTGGCGTCTCCGGTA
CTTTAGACCCCAAGTTTAAAAAAAAGCAATCTTGGAATTTATAAACTCTT
TTATTTATCTCCTCCCCGTGTACTTCTTGACTGACCTTCTTCATTGTAGG
CTTTGATGTATCAGACCAGGATATCCAATCCCTTATAGATGAATCGGGAA
TCACACCAGAAGATGCCGACTACCTTGATGATGATTTTAGGCATCTATGT
GAACAATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAATGTCAGGA
AGCGTATATATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTAA Coding sequence (CDS) from alignment at sc0000182_pilon:161274..164619- >XLOC_032918 ID=XLOC_032918|Name=XLOC_032918|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2544bp|location=Sequence derived from alignment at sc0000182_pilon:161274..164619- (Clytia hemisphaerica_ch_hm2_pilon)
AACTTTCGTTTTAAGTTTGTTTTACATTTCTTTTTTTCAGTTTATCAAAT
TAAAATGAATACCAACTGGAAATATGATGACTTACTTAAGGGAAAATTGG
AGTTGTATGTTGCTCAATGTTTGAAACGAACTGAGATTGTTGAACTTATG
AAAAAAGAATTTGGCAACTATCCTTGGAGTTTGAGTACTCTAACCAGGAG
ATTCAATCATTTTGGAATTAGATATACTGATACTGAAGTTCCTGTCGAGT
CTGTCAGAGAAGCTGTTTCAACTGAACTTCGAGGTCCAGGGCGACTTTTG
GGCTACAGAGCCATGCATAAAAAACTACGTGTTGTTCATGGTTTGAAAGT
TCCTAGGAGTCTTGTTCATGATGTTATGTTTTTGGAAGAAAGTCAATTAC
TGAAGGACAGAAGACCCTGTCAGAAGAAAAAGAGAGTGAAGGGTCATTTT
GTATCAAATGGACCTAATTGGGTACACTCCTTTGATGGCCATGATAAGCT
TATGGGCTATCAGAACAGCACCTTCCCTCTAGCTGTGTATGGCTGTATCG
ACACTGCTAGTCGAAAGATACTTTGGCTCAAAATTTGGACTTCTAACAGC
GACCCAAAGCTTGTTGGTAAATGGTATCTTCAACATATCATTGAGACGAA
AAGGATTTCAAATATGGTTCGCCTTGATAAAGGTACTGAAACAGGTGATC
TTGCGGCTATTCATTGTTTTCTGCGTTCCCGTTGTGACGAAAACTTGGAA
GACCCTTCATCTGTGATACACTATGGTCCATCAACCTCAAATCAGAACTT
TCGTTTTAAGTTTGTTTTACATTTCTTTTTTTCAGTTTATCAAATTAAAA
TGAATACCAACTGGAAATATGATGACTTACTTAAGGGAAAATTGGAGTTG
TATGTTGCTCAATGTTTGAAACGAACTGAGATTGTTGAACTTATGAAAAA
AGAATTTGGCAACTATCCTTGGAGTTTGAGTACTCTAACCAGGAGATTCA
ATCATTTTGGAATTAGATATACTGATACTGAAGTTCCTGTCGAGTCTGTC
AGAGAAGCTGTTTCAACTGAACTTCGAGGTCCAGGGCGACTTTTGGGCTA
CAGAGCCATGCATAAAAAACTACGTGTTGTTCATGGTTTGAAAGTTCCTA
GGAGTCTTGTTCATGATGTTATGTTTTTGGAAGAAAGTCAATTACTGAAG
GACAGAAGACCCTGTCAGAAGAAAAAGAGAGTGAAGGGTCATTTTGTATC
AAATGGACCTAATTGGGTACACTCCTTTGATGGCCATGATAAGCTTATGG
GCTATCAGAACAGCACCTTCCCTCTAGCTGTGTATGGCTGTATCGACACT
GCTAGTCGAAAGATACTTTGGCTCAAAATTTGGACTTCTAACAGCGACCC
AAAGCTTGTTGGTAAATGGTATCTTCAACATATCATTGAGACGAAAAGGA
TTTCAAATATGGTTCGCCTTGATAAAGGTACTGAAACAGGTGATCTTGCG
GCTATTCATTGTTTTCTGCGTTCCCGTTGTGACGAAAACTTGGAAGACCC
TTCATCTGTGATACACTATGGTCCATCAACCTCAAATCAGATTGAGCGAT
GGTGGAAAGAACTACATGAAAGACTAGAGAAATTCTTCAAAGGTCAACTC
CTGTTCTTAAAATGTGGCGGACATTATGATCCAAGTTGTGAACAAGACAG
ATTGAGCGATGGTGGAAAGAACTACATGAAAGACTAGAGAAATTCTTCAA
AGGTCAACTCCTGTTCTTAAAATGTGGCGGACATTATGATCCAAGTTGTG
AACAAGACAGGATGATTTTAGCCTATATCATGATCCCAATCCTCCAAGCC
GAACTTAACACATTCAAAGATGTCATCTGGAATTGCCATCGCATTAGATA
TCAAAAAGACCAAGTTTTACCAGACGGTGTTCCCAACCACATTTATACCG
TACCTGAGGTGCATGACCTTGTTGAATGTGGATGATTTTAGCCTATATCA
TGATCCCAATCCTCCAAGCCGAACTTAACACATTCAAAGATGTCATCTGG
AATTGCCATCGCATTAGATATCAAAAAGACCAAGTTTTACCAGACGGTGT
TCCCAACCACATTTATACCGTACCTGAGGTGCATGACCTTGTTGAATGTG
GCTTTGATGTATCAGACCAGGATATCCAATCCCTTATAGATGAATCGGGA
ATCACACCAGAAGATGCCGACTACCTTGATGATGATTTTAGGCATCTATG
TGAACAATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAATGTCAGG
AAGCGTATATATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTAAGCT
TTGATGTATCAGACCAGGATATCCAATCCCTTATAGATGAATCGGGAATC
ACACCAGAAGATGCCGACTACCTTGATGATGATTTTAGGCATCTATGTGA
ACAATATCTACCAAATCTAGAGCTCGTTAAACCTCATGAATGTCAGGAAG
CGTATATATACTTAAAACGAGAGATTGAAAATGGCAGTTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000182_pilon | genome | sc0000182_pilon:161274..164619 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1063-1257:196 |
| Aaloc | 892-1059:1474 |
| Aaloc | 781-888:1842 |
| Aaloc | 736-780:2597 |
| Aaloc | 79-735:3257 |
| Aaloc | 1-78:3347 |
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