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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:206713..210416+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032695 ID=XLOC_032695|Name=XLOC_032695|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3704bp|location=Sequence derived from alignment at sc0000392_pilon:206713..210416+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAGGCAACTAGGCAGATTTACAACACTTTTAAACAGGAGGATACC
ATTATGCCAAAAAGAAGGAATCGCCTTGTCACAAACATGTAGAAAAACGT
TTGCCGCAAATTTTTGTAATGGATATAATCTACAGCAAGATCAAGACATT
GTTATTGGACATTATTTGAACAGAATCGAAAGCAATTGTTTAAATCACAT
AAATGATGGGAACACTCTTGAAGTATACCAGTCAGTAGTATTTGCTGTAA
AACCaaacgaatttgaaaaattaccgCCTAAATGTGCATCTTGTGGAGTG
ATATTACAAACTGAGTATGAGAGCTCAGCAGGTTATGTGCCAAGTAAAAA
GCTTGATGAATCAATGAAGGATGATGTACTAAGTAGATTATCATGTATGT
CATGTTTTCAATTGCAGTCTTATAACAAGCCTTTGGCCAAGAGGATATCA
AACGGAGAAGTAATTAACCAGTTGAAACATCTCAGGCAACAAAAAGCTTT
AATCTTGTATGTTGTTGACATGTTTGACCTTGAGGGAACAATGTTTAAAA
ACCTTCAGCAAGTGATTGGTAATAAGAAACGTATCATTCTTGTTGGTAAC
AAATGCGATAGGTTGCCTCAAGATAATCCTAAAGCATCAAAACAGTTGGA
ACACATGAAAGATATATTGAAACAAACTTGTTTTGAGTACAGTCTAGACA
AAGATTGTAATTTCAGAGACATCTGTCTGGTAAGCTCTAAATCAGGATAT
GGTATGTTGTCTTTGGTAGAAAAGATATCCAAACATAGAGATATGGATAT
GGACGTGTATCTAGTTGGTTGCACTAATACGGGCAAAACATCACTGTATA
ATTTACTGATGAATCTGTTGAATGTTCATAAGGATGAGATTCTACCTCCA
CAAGGGATTGTACATCATCTACCAGGAAGTACCAACAGTTTAATTCGACA
TGACATCAGTATGAGAAGGCTGGTGCGTTTGAAAGATCGCCTGAAGAATG
ATCCATGGGAGGTaagaagatttattttcaatatgATTGTATTAAAATGA
TATTAGCAAGGAAGGATGTTTTTACCGCTTTGCCATTTGCCTATGAGATT
TCAACAGATTTTGACATTATTTTGTCAATATACTTCTGTTTTATGTTACC
AATATTTGTTATAATAACCTCTGGTTGAagaatgttaaattgattccaAA
CAGCTGATAGGTATAGCTGATGTATAAAGCTAAAAAAGTCTTAACCCACT
AATACTATCTTTCTTAAAGTTTGAGAGAGAATGGAAAGTTGACGAAGATC
TGGAGAATTTCATCACACAAAAAGAATATGCTTCCCTACAAAACTTGGAT
GCGAAAGCACCTGTACCCAGAATGCTTGAGGACAAATCAAAGAAATCAGT
GGAACCATTCAAACTGGAAATTGTGGATGaagaatatttgaaaagaaaac
agaaagagAAGAAACAGAATTACCTTTATGATACTCCTGGAATACTTAAT
GAAACTCAAGTAATTCAAATTGATAtttctttccaaacagtttaacttta
atctttttagtcttttacaggtcttttattttatttctcgactttcttcc
ttttGATTGTTATATTCTATTTAAATTATTTCTCATCTTATTATTAAACA
GAAGAGCTCATTGTAAATACGGCTACGAGTAATATTTTGAAGTGATCCCA
AGCTCCTTTTGGATGTATCAATTTCTTGTCCACGCACATCattccattat
ttttttcttttagattgTTCGGCATTTCAACTCGTCAGAAATTAATTATT
TGTCACCACAAAAATGGATTGTACCAAGAAGCTTCCTCATAAAACCTGGT
GGTTGCTTGTTTATTGGTGGTTTTGCTCGATTTGATTATCATAATGTAAA
GTTTGTCTTTTTTCCTTTGTTTGAAATAAATTACTTTTGCAATGTAACTT
TGTTTATACCAGTTAAGTTACCACCACATTTAGATACTTTTTGTAGAAGC
TTTACTCATTACACATAACTAGTCGTCTGCATGTTATTAGAGACCTGTTA
TGCTCTGTAGAGGTTAAGATCTTGTAGACTCTCCTGAAGGGATTTTTACC
TCATCGATATACaaaacatttttcactttttagatTCACTGGCCAAAAAG
GATGATAGGCTCTGAAGAAGATGCGTCTGACCCTGTAAATGTGAGTGGTC
TTTTATTTATATCCAGTCTGGAAAAAGACTTTTACCTTGATGTCTCAAAG
GTTCGAAAGTCTCCCTTCCAAATGTTTCGCATTTTGtattcgaaaatttt
tcggGATCATCTGAGTTTCAAACTTTTAGTGCTTTTAAGTTAGAAAATAG
TAGAGTATTCACTCGAATGTTAAACTTAAAAGTATAAATATCTTCTTCTC
TGTTTATAATTTCTAGTCTGCATTGCCAATCTACGTCACATTGATGGTAT
CACCAAACGTTCCCGGGCATGTGACCATTACTGAAACAGCTGatgagaaa
tatgaaaaattgttCGTCAATGGAGTTTTAGGGGTGAGATATTATTCTTA
ATTTCAAAAAGGAGTTCTATCCCTCGCCAGGCGAGGGAAATCACGCCCtt
caagttgatttttttctaactttATATATTCTTGTTTATTTGTGTAAGGG
ACCGAGCTCTTAAAAGATAAAATGTTATTCAGTTGTCTTTCTCTGTTTCT
AAATTTAAGTTGTCTCATAAAAAATAACTGCCAGGTCTAAACATCTTTTA
TTAGCATAGTATATGTTTGATCTTTTAAATGGAAAACAAATCATGTGCAG
CCCATAAGCAGTAAAATTTCAGAAGTGTGGGTTTTAATAAGCAATTCTTC
ATTTCTATAGTTACCAGAAGGTGGTCAGGAGCGTTTTGATGAATTCCCTC
CTCTGAAACCCATCAAATACACAACTGTTGGCCAATCGCGTAACACGAAC
TGTTGTGACGTAGCACTTCATGGTGTTGGGTGGCTCTCCATTTCAGCAGC
TACCGAAGGGAGAGTCACTTTCTCGGTACACACACCCAATGGTGAAGGGC
AGAGTATGAGGCGCACACCGCTTTTACCGTTCACAGTCAGAAAGAAAGGT
AATGACAGGGCTTTAAGTCTAGATTAATATTTATTATTTCCTTAACAGTC
TTCTACATTTTAGTCTCAGAAACGCATCTTATTGGTAAAAATTTTCGTCA
ATATTGTTAAGCTAATTTTTTAATCCAATAAATAAGCTGTTGTCTCGTAA
GATCAAAATGGAAGGAAGTACACAGGAGTTCCTAAGCCCCACCAAATTTC
GTAAAAGGTTTGTGCCCCTTTGGTACTacatcttttcttcttttttaact
gtttcattttacttttcATCCTGTGCATGATTCGACCCTTTACTTTAATC
TTTAGAAGGGAGAGGAGTTGCTTACAGGGGACACGTTAACAGAAACATGT
ATTCATCAAGTCGTCAGAAATCACCACAATTCACCAGACTCTTTCAGCAT
CAAAACCAACCCGTATATGAATGgaaagcaaaaatacgcgagaaaattaa
atttgatcgaaaacaaatcaaagaggaaaaacgaatTGATCGATTAAAGT
CGGGTGTACTTCTCGGAAAGTTTAAGAGACTTGCTGAAAAAGAAGAACAG
CTAAGGCTAAGAGAAGTGGAGCAACAAGCACTGCtttcagaaaacagaaa
ataa Coding sequence (CDS) from alignment at sc0000392_pilon:206713..210416+ >XLOC_032695 ID=XLOC_032695|Name=XLOC_032695|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4188bp|location=Sequence derived from alignment at sc0000392_pilon:206713..210416+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAGGCAACTAGGCAGATTTACAACACTTTTAAACAGGAGGATACC
ATTATGCCAAAAAGAAGGAATCGCCTTGTCACAAACATGTAGAAAAACGT
TTGCCGCAAATTTTTGTAATGGATATAATCTACAGCAAGATCAAGACATT
GTTATTGGACATTATTTGAACAGAATCGAAAGCAATTGTTTAAATCACAT
AAATGATGGGAACACTCTTGAAGTATACCAGTCAGTAGTATTTGCTGTAA
AACCaaacgaatttgaaaaattaccgCCTAAATGTGCATCTTGTGGAGTG
ATATTACAAACTGAGTATGAGAGCTCAGCAGGTTATGTGCCAAGTAAAAA
GCTTGATGAATCAATGAAGGATGATGTACTAAGTAGATTATCATGTATGT
CATGTTTTCAATTGCAGTCTTATAACAAGCCTTTGGCCAAGAGGATATCA
AACGGAGAAGTAATTAACCAGTTGAAACATCTCAGGCAACAAAAAGCTTT
AATCTTGTATGTTGTTGACATGTTTGACCTTGAGGGAACAATGTTTAAAA
ACCTTCAGCAAGTGATTGGTAATAAGAAACGTATCATTCTTGTTGGTAAC
AAATGCGATAGGTTGCCTCAAGATAATCCTAAAGCATCAAAACAGTTGGA
ACACATGAAAGATATATTGAAACAAACTTGTTTTGAGTACAGTCTAGACA
AAGATTGTAATTTCAGAGACATCTGTCTGGTAAGCTCTAAATCAGGATAT
GGTATGTTGTCTTTGGTAGAAAAGATATCCAAACATAGAGATATGGATAT
GGACGTGTATCTAGTTGGTTGCACTAATACGGGCAAAACATCACTGTATA
ATTTACTGATGAATCTGTTGAATGTTCATAAGGATGAGATTCTACCTCCA
CAAGGGATTGTACATCATCTACCAGGAAGTACCAACAGTTTAATTCGACA
TGACATCAGTATGAGAAGGCTGGTGCGTTTGAAAGATCGCCTGAAGAATG
ATCCATGGGAGATGTATAGGCAACTAGGCAGATTTACAACACTTTTAAAC
AGGAGGATACCATTATGCCAAAAAGAAGGAATCGCCTTGTCACAAACATG
TAGAAAAACGTTTGCCGCAAATTTTTGTAATGGATATAATCTACAGCAAG
ATCAAGACATTGTTATTGGACATTATTTGAACAGAATCGAAAGCAATTGT
TTAAATCACATAAATGATGGGAACACTCTTGAAGTATACCAGTCAGTAGT
ATTTGCTGTAAAACCaaacgaatttgaaaaattaccgCCTAAATGTGCAT
CTTGTGGAGTGATATTACAAACTGAGTATGAGAGCTCAGCAGGTTATGTG
CCAAGTAAAAAGCTTGATGAATCAATGAAGGATGATGTACTAAGTAGATT
ATCATGTATGTCATGTTTTCAATTGCAGTCTTATAACAAGCCTTTGGCCA
AGAGGATATCAAACGGAGAAGTAATTAACCAGTTGAAACATCTCAGGCAA
CAAAAAGCTTTAATCTTGTATGTTGTTGACATGTTTGACCTTGAGGGAAC
AATGTTTAAAAACCTTCAGCAAGTGATTGGTAATAAGAAACGTATCATTC
TTGTTGGTAACAAATGCGATAGGTTGCCTCAAGATAATCCTAAAGCATCA
AAACAGTTGGAACACATGAAAGATATATTGAAACAAACTTGTTTTGAGTA
CAGTCTAGACAAAGATTGTAATTTCAGAGACATCTGTCTGGTAAGCTCTA
AATCAGGATATGGTATGTTGTCTTTGGTAGAAAAGATATCCAAACATAGA
GATATGGATATGGACGTGTATCTAGTTGGTTGCACTAATACGGGCAAAAC
ATCACTGTATAATTTACTGATGAATCTGTTGAATGTTCATAAGGATGAGA
TTCTACCTCCACAAGGGATTGTACATCATCTACCAGGAAGTACCAACAGT
TTAATTCGACATGACATCAGTATGAGAAGGCTGGTGCGTTTGAAAGATCG
CCTGAAGAATGATCCATGGGAGTTTGAGAGAGAATGGAAAGTTGACGAAG
ATCTGGAGAATTTCATCACACAAAAAGAATATGCTTCCCTACAAAACTTG
GATGCGAAAGCACCTGTACCCAGAATGCTTGAGGACAAATCAAAGAAATC
AGTGGAACCATTCAAACTGGAAATTGTGGATGaagaatatttgaaaagaa
aacagaaagagAAGAAACAGAATTACCTTTATGATACTCCTGGAATACTT
AATGAAACTCAATTTGAGAGAGAATGGAAAGTTGACGAAGATCTGGAGAA
TTTCATCACACAAAAAGAATATGCTTCCCTACAAAACTTGGATGCGAAAG
CACCTGTACCCAGAATGCTTGAGGACAAATCAAAGAAATCAGTGGAACCA
TTCAAACTGGAAATTGTGGATGaagaatatttgaaaagaaaacagaaaga
gAAGAAACAGAATTACCTTTATGATACTCCTGGAATACTTAATGAAACTC
AAattgTTCGGCATTTCAACTCGTCAGAAATTAATTATTTGTCACCACAA
AAATGGATTGTACCAAGAAGCTTCCTCATAAAACCTGGTGGTTGCTTGTT
TATTGGTGGTTTTGCTCGATTTGATTATCATAATattgTTCGGCATTTCA
ACTCGTCAGAAATTAATTATTTGTCACCACAAAAATGGATTGTACCAAGA
AGCTTCCTCATAAAACCTGGTGGTTGCTTGTTTATTGGTGGTTTTGCTCG
ATTTGATTATCATAATatTCACTGGCCAAAAAGGATGATAGGCTCTGAAG
AAGATGCGTCTGACCCTGTAAATatTCACTGGCCAAAAAGGATGATAGGC
TCTGAAGAAGATGCGTCTGACCCTGTAAATTCTGCATTGCCAATCTACGT
CACATTGATGGTATCACCAAACGTTCCCGGGCATGTGACCATTACTGAAA
CAGCTGatgagaaatatgaaaaattgttCGTCAATGGAGTTTTAGGGTCT
GCATTGCCAATCTACGTCACATTGATGGTATCACCAAACGTTCCCGGGCA
TGTGACCATTACTGAAACAGCTGatgagaaatatgaaaaattgttCGTCA
ATGGAGTTTTAGGGTTACCAGAAGGTGGTCAGGAGCGTTTTGATGAATTC
CCTCCTCTGAAACCCATCAAATACACAACTGTTGGCCAATCGCGTAACAC
GAACTGTTGTGACGTAGCACTTCATGGTGTTGGGTGGCTCTCCATTTCAG
CAGCTACCGAAGGGAGAGTCACTTTCTCGGTACACACACCCAATGGTGAA
GGGCAGAGTATGAGGCGCACACCGCTTTTACCGTTCACAGTCAGAAAGAA
AGTTACCAGAAGGTGGTCAGGAGCGTTTTGATGAATTCCCTCCTCTGAAA
CCCATCAAATACACAACTGTTGGCCAATCGCGTAACACGAACTGTTGTGA
CGTAGCACTTCATGGTGTTGGGTGGCTCTCCATTTCAGCAGCTACCGAAG
GGAGAGTCACTTTCTCGGTACACACACCCAATGGTGAAGGGCAGAGTATG
AGGCGCACACCGCTTTTACCGTTCACAGTCAGAAAGAAAGAAGGGAGAGG
AGTTGCTTACAGGGGACACGTTAACAGAAACATGTATTCATCAAGTCGTC
AGAAATCACCACAATTCACCAGACTCTTTCAGCATCAAAACCAACCCGTA
TATGAATGgaaagcaaaaatacgcgagaaaattaaatttgatcgaaaaca
aatcaaagaggaaaaacgaatTGATCGATTAAAGTCGGGTGTACTTCTCG
GAAAGTTTAAGAGACTTGCTGAAAAAGAAGAACAGCTAAGGCTAAGAGAA
GTGGAGCAACAAGCACTGCtttcagaaaacagaaaataaAAGGGAGAGGA
GTTGCTTACAGGGGACACGTTAACAGAAACATGTATTCATCAAGTCGTCA
GAAATCACCACAATTCACCAGACTCTTTCAGCATCAAAACCAACCCGTAT
ATGAATGgaaagcaaaaatacgcgagaaaattaaatttgatcgaaaacaa
atcaaagaggaaaaacgaatTGATCGATTAAAGTCGGGTGTACTTCTCGG
AAAGTTTAAGAGACTTGCTGAAAAAGAAGAACAGCTAAGGCTAAGAGAAG
TGGAGCAACAAGCACTGCtttcagaaaacagaaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:206713..210416 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1798-2094:3408 |
| Aaloc | 1558-1794:2861 |
| Aaloc | 1441-1557:2417 |
| Aaloc | 1384-1440:2134 |
| Aaloc | 1252-1383:1764 |
| Aaloc | 1012-1251:1270 |
| Aaloc | 1-1011:1 |
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