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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3690637..3694544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032586 ID=XLOC_032586|Name=XLOC_032586|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3908bp|location=Sequence derived from alignment at sc0000001_pilon:3690637..3694544- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGGTATAGCACACGAGTGTTTACAGCATGGTTTTGTTCTGGGACG
GAGTCTAGGCGAGGGAGGATACGGGCAAGTCAAACAAGCGTCGTACGTGA
ACTTTAACTGCCCCAATGATACTCTCGCCAAGAGGCTCCGCTCCTTTGGA
CACAGTGACCAAGTAAGTTATTAATTGCTCAACTTTCATTGCTTTATATT
CAATACGTTCGTTGCTTTTCTTTCTTTCCCTAATATTTTTAGCTAGACTA
TAATAGACGCTAGATTCTACTGCCCAGACAATCATCATGCCAAAAAGCTG
AGATTATAGTATAAGTTTTGAATAGTAAAACAAAGATTGTTGATAACGTC
TTTAAATAAACGGGTTATTGATTATTCGTTGGTTTTGCGAGTGCAATGTG
TTTCTTTTTAATAATTTCATAATTTTTTTTCCCATTTAAAGGTTGCTATC
AAAATAATGAAGAAAGCAAACTGCTCTCAAACCTTCGAAAGGGAAGTGAG
TTGCATGCTAAAACTGACTGGCTGTCGGAACGTTGTCCAGTTATTCAGAT
ACTTCACCGGAGAAAACCATGTTTACTTGGTGATCGAACTTTGTACTGGA
GGTGACTTGATCACACATTTCACCAACAGCCAGAAAATTAACGTAAAGAA
AATTTTTCAACAGATTTCTGATGGCGTGCAGCAAATGCACGTAAAGGGCA
TCGCCCACCGGTAAGTTTAAGAACCTATTGCTGGTTATGTCTGCCTACTC
TCGGGTACCTAATAGCCGGGGGGGGGGGGTTTGGAATAAGCAGGGGGGTT
GGAAAAAATCTCAAAATTTAATAAGCGGGGGGGTTGGAATAAAAATGTCC
TGGGTGGAAAATGTTCGAAAAGGAGGCTGATACAGCAGAATTAGGGCAAA
AGAGGGAACTTCTGAAATTTTTTTCCCAAAAATCAATAAGCGGGGGGGTT
GGAATAAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTAGCGGGC
CCCCCCGGCTATTAGGTACCCGAGAGTATTTGTCAATCAAATCAAGTCAT
ATTTTTGCACTTGGTCATAGCACCCTTAGGTTTCAATACGATGACACGGA
GCCGATTTGAAAAGTTTTGGGGTTTTTCAAAATGTTCATGGAGCATTGTT
AAAAAGAAAAATTTTATACAAATTAAACCTATTCATTTCATGTTTTTCAG
AGACTTGAAACCAGAAAACGTCTTGATTGACCGAAATGGTATCGCTAAGA
TCTCGGGTATGTTTTCCATTCATTTTAAAGCAATTCAGGATCGTCTCTAA
ATGCCTTTTTACAATTCCCCCTGTAAATTAAATAAATATAAAATAGCGTG
TAACAGAGGCAGGCACCGATTCCTATGAAATAGGTCAATGAACCAATTCC
CTGTGTGATGATTAAAAACTTTTTAATCGTATTTTTTCAGACTTTGGTAC
TACAATCATGCCATCATCTCCGGACAACCTTTGTAATTCCTATTGTGGAA
CACCGGAATATATGGCACCAGAGGTCCTGCGTGGAGTTAAGCTCATCAGT
TACAAACCGTACAATCCTTTCAAGGCCGATATGTGGAGTTTGTAAGTCGA
TCTGTTTTAATACATTGTCAATTTTATTCGAAAAGCTAACAGTAGGTCTC
TCTGTGTCATTATGAATATGCCAACTTATGAGACTTGCCGCGGTGAAATT
TCATCATTTTTTAATTCCACCCTGAAAAGAAAAAAATTATAAAGGAATGA
TCCAAAGTCAGAAAACGCGGGAAAGAGTTAGGGCTTCAGGGCGGTTAACG
GGAAGAATAGCGGCGGTAGAGTTTTGGAAGACTGTAAACATCTCCGCCAC
TGCTTACTCCACCCGAATTTATCACGCCTCTCCTAAACTATTCCCTTTTT
TTAGTGATCTTGTGTAGACGATAGGATCGACTACCCTAACATATTCATTT
TTTCAAAAATTTAATGAATCTGCGGCCTTATCAGATATTTTCCGAACCTG
AAAAAAGAAGTCATTTGTAGCCTGAATGATGAGTCAAATTGGGGTCTATA
GAATATATCTTAAATTGGTTGTAGCAGGTCACTTTTTTTTAAAGATTTTT
TCTCTGTAAAAAATTCATTTTTTTCTCTCAATTTTAGAGGTGCTATCCTG
TATTCCTTTCTTACTGGAGAGTTCCTTCCACAAGTTGGTTCTTGGAAAGA
AAATTTGTCCGTCTCTAATGGTAAGTTTGAAGGTATTTCGTTCAAGTGGA
TGATTTCTACAATTCCTGGAGAACTTTTGAGGCCCAGTACTGACGAACCC
TGAACTAGGAGGAAGCTCTGGCAGTATTAGCACTTTTCAACAAAATAAGA
ATTTTAGCAACTTTCTGTTGTCGCTGACCCAAAAAAGGGTATTTTAGTGG
CTCCTGCATGCCCTAACTCATTTGTACAGTAGCCGAAAAATTGTGACATT
CTAAAGATTTTCCTGGGCCATTTTTTGCTTGCGATGAAAACGACCACTTG
GATTGAACCTAATTCTTTACATTCATCTTTTAGAATGTCTTGATCTCTTG
GCCAAGCTCTTGAGTATCAAACCACCGTTGAGACCAACCATTGGTGACAT
TCAAAGACACCCCTGGCTTTCGGCTTCTCATAAGGTGATTTTCTAAAGTG
TGTCCGCAAAAAAGAATAAGAATTTATTTTCATCAAAACATTTTGGAAAT
GACAAACTCTGCATTGCTGATCTTATAAAAAATAGTTCCAACCGGCTGAT
TTATTTATTTGTAAAAACACTTCATTCCACCCACGACTGGATAACAATTT
TCGCCAAATACTCCTTTTTTATCTGAATGATTTAACCATAACGTAAAATC
ATTAAATCATTAACATTGAAACTTCTTTTCTAGGAACCCGCAATCAAACA
AATAGAGTTGATCAACAATATGATCAAAGAATTTGATTGTTTGGTGGATA
GAAAAAAGGCTCTTAAAGAAGAGTTAGCCGAAGCTGAAAATAAAAATAAA
ATCCTTAAATTGAAGCTTGGCATCAGTGAAAAGGTGAGAAAATGTCATTT
TTTTGGCCATATCTCAGCCTGTTAAGATGAACGAGAATAAAAAAATAAGA
AAAGGTTTTTCCCAAATTCCCATATATTTTTAGTCCAAGTGTCTTTTATA
GTTATGTTGTTACAGTAGCGTAGGCAGAAGGGGCGCAAAATTTGTGTAGG
AGAGCAAACTTTCATGACACTGTGATTATTCTATTCATAATGTAAAAAGA
TAATCAGAGTGTCATAAAAATCTGCTCTCCCACATAAATTTTGCGCTCCT
CCTGTCTACGCTACTGTTTGTAAGCCCTCGTATTATTTCAAAGCGATTTA
CGCTAGACATAATCGAATATTTTTCGCCAGATGAAGTTCACATTTTCGCC
TGAGTAAACGAAAATAAATTCACGCGAGATTTTCGAAATTGTGCTTTCCG
ACGCAAAGCTTATAATTTAATTCTAACTATGTTCTAGCAACCATCTCGCT
ACAAAGTCATCGTTCAACAAGATCTAGACGAAAAGGTGAGTTTACTTTCT
TAAATGTTAGCACTTTTCGCTTTTCAGTAGGAATTGAAGTTTTTAGTGTA
ATTTCCTAAAAAATTACCGTACTTTTTTTTTCTACAGTAAAAACAACTGA
TAATTTATTTTCTCATAGATACCGACCACTGCCCAAGAAGCTAGCGACGA
AATGGCCAAAATGATGAACAATCTCGCCCATAATATCAAGAGAGCAAATA
TCTTATTAAAAAGACAAAAAGCAGATTTGCAGAAAATCAACAGCGAAAAT
GTTCTTCTCGGACACAAATTTTTTGAGAAGATATTGAGAAACAACGCCGC
TTCAAATCCTCAATTCCCAAATGGACATCATTTTCCATCCACGGAATTAT
GGGAATGA Coding sequence (CDS) from alignment at sc0000001_pilon:3690637..3694544- >XLOC_032586 ID=XLOC_032586|Name=XLOC_032586|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2520bp|location=Sequence derived from alignment at sc0000001_pilon:3690637..3694544- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGGTATAGCACACGAGTGTTTACAGCATGGTTTTGTTCTGGGACG
GAGTCTAGGCGAGGGAGGATACGGGCAAGTCAAACAAGCGTCGTACGTGA
ACTTTAACTGCCCCAATGATACTCTCGCCAAGAGGCTCCGCTCCTTTGGA
CACAGTGACCAAATGAGTGGTATAGCACACGAGTGTTTACAGCATGGTTT
TGTTCTGGGACGGAGTCTAGGCGAGGGAGGATACGGGCAAGTCAAACAAG
CGTCGTACGTGAACTTTAACTGCCCCAATGATACTCTCGCCAAGAGGCTC
CGCTCCTTTGGACACAGTGACCAAGTTGCTATCAAAATAATGAAGAAAGC
AAACTGCTCTCAAACCTTCGAAAGGGAAGTGAGTTGCATGCTAAAACTGA
CTGGCTGTCGGAACGTTGTCCAGTTATTCAGATACTTCACCGGAGAAAAC
CATGTTTACTTGGTGATCGAACTTTGTACTGGAGGTGACTTGATCACACA
TTTCACCAACAGCCAGAAAATTAACGTAAAGAAAATTTTTCAACAGATTT
CTGATGGCGTGCAGCAAATGCACGTAAAGGGCATCGCCCACCGGTTGCTA
TCAAAATAATGAAGAAAGCAAACTGCTCTCAAACCTTCGAAAGGGAAGTG
AGTTGCATGCTAAAACTGACTGGCTGTCGGAACGTTGTCCAGTTATTCAG
ATACTTCACCGGAGAAAACCATGTTTACTTGGTGATCGAACTTTGTACTG
GAGGTGACTTGATCACACATTTCACCAACAGCCAGAAAATTAACGTAAAG
AAAATTTTTCAACAGATTTCTGATGGCGTGCAGCAAATGCACGTAAAGGG
CATCGCCCACCGAGACTTGAAACCAGAAAACGTCTTGATTGACCGAAATG
GTATCGCTAAGATCTCGGAGACTTGAAACCAGAAAACGTCTTGATTGACC
GAAATGGTATCGCTAAGATCTCGGACTTTGGTACTACAATCATGCCATCA
TCTCCGGACAACCTTTGTAATTCCTATTGTGGAACACCGGAATATATGGC
ACCAGAGGTCCTGCGTGGAGTTAAGCTCATCAGTTACAAACCGTACAATC
CTTTCAAGGCCGATATGTGGAGTTTACTTTGGTACTACAATCATGCCATC
ATCTCCGGACAACCTTTGTAATTCCTATTGTGGAACACCGGAATATATGG
CACCAGAGGTCCTGCGTGGAGTTAAGCTCATCAGTTACAAACCGTACAAT
CCTTTCAAGGCCGATATGTGGAGTTTAGGTGCTATCCTGTATTCCTTTCT
TACTGGAGAGTTCCTTCCACAAGTTGGTTCTTGGAAAGAAAATTTGTCCG
TCTCTAATGAGGTGCTATCCTGTATTCCTTTCTTACTGGAGAGTTCCTTC
CACAAGTTGGTTCTTGGAAAGAAAATTTGTCCGTCTCTAATGAATGTCTT
GATCTCTTGGCCAAGCTCTTGAGTATCAAACCACCGTTGAGACCAACCAT
TGGTGACATTCAAAGACACCCCTGGCTTTCGGCTTCTCATAAGAATGTCT
TGATCTCTTGGCCAAGCTCTTGAGTATCAAACCACCGTTGAGACCAACCA
TTGGTGACATTCAAAGACACCCCTGGCTTTCGGCTTCTCATAAGGAACCC
GCAATCAAACAAATAGAGTTGATCAACAATATGATCAAAGAATTTGATTG
TTTGGTGGATAGAAAAAAGGCTCTTAAAGAAGAGTTAGCCGAAGCTGAAA
ATAAAAATAAAATCCTTAAATTGAAGCTTGGCATCAGTGAAAAGGAACCC
GCAATCAAACAAATAGAGTTGATCAACAATATGATCAAAGAATTTGATTG
TTTGGTGGATAGAAAAAAGGCTCTTAAAGAAGAGTTAGCCGAAGCTGAAA
ATAAAAATAAAATCCTTAAATTGAAGCTTGGCATCAGTGAAAAGCAACCA
TCTCGCTACAAAGTCATCGTTCAACAAGATCTAGACGAAAAGCAACCATC
TCGCTACAAAGTCATCGTTCAACAAGATCTAGACGAAAAGATACCGACCA
CTGCCCAAGAAGCTAGCGACGAAATGGCCAAAATGATGAACAATCTCGCC
CATAATATCAAGAGAGCAAATATCTTATTAAAAAGACAAAAAGCAGATTT
GCAGAAAATCAACAGCGAAAATGTTCTTCTCGGACACAAATTTTTTGAGA
AGATATTGAGAAACAACGCCGCTTCAAATCCTCAATTCCCAAATGGACAT
CATTTTCCATCCACGGAATTATGGGAATGAATACCGACCACTGCCCAAGA
AGCTAGCGACGAAATGGCCAAAATGATGAACAATCTCGCCCATAATATCA
AGAGAGCAAATATCTTATTAAAAAGACAAAAAGCAGATTTGCAGAAAATC
AACAGCGAAAATGTTCTTCTCGGACACAAATTTTTTGAGAAGATATTGAG
AAACAACGCCGCTTCAAATCCTCAATTCCCAAATGGACATCATTTTCCAT
CCACGGAATTATGGGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3690637..3694544 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1021-1260:241 |
| Aaloc | 973-1020:422 |
| Aaloc | 823-972:1026 |
| Aaloc | 724-822:1374 |
| Aaloc | 640-720:1771 |
| Aaloc | 490-636:2467 |
| Aaloc | 433-486:2708 |
| Aaloc | 163-429:3468 |
| Aaloc | 1-162:3909 |
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