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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3499123..3504880+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032562 ID=XLOC_032562|Name=XLOC_032562|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5758bp|location=Sequence derived from alignment at sc0000001_pilon:3499123..3504880+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCGAATAAACAAAACATCATCCAAGAAGAAGAAATGGCAAGTCA
GGCATGCGCAGTACAAACTGATCATTCGAAATGTTCCATTTGTCTAATGC
CATTGGTCAACCAAGGTTCTTCAAACAAATGTCACCAATGTATGGCAAAG
ATTGATTCTGTACCGAATGGTTTCCCTTTCGAGACCGTAGGACCAGAGAG
AAAGGAATTTGAGTGTCCAATTTGTCTATGCATCATAAAAAATGCTACCG
AACTCCCTTGCGAACATTTAATGTGCAAAGAATGTTTGGAACACTATGAA
AAGGAACAAAATGAAAGAGCTAAAAGGTATAAACCCAATAGACATACAac
tttgtttcaacgtttatctaacgtccatATAGCGtttgatgaacgttgaa
acaaagttgtgtgccagctgggaaggaaACGCCGGATTTTGATGGGCATT
TGAAAGCTCCCTTTATCTCCTCATATTtgttgaacaaaataaaacttagT
ATCAtattatggcgcgccaaagcggaaataaatactatctctcatttcgc
gacactacctttcatttcacgacactatctttcacttcgcggcactatct
ttcatttcgcgacactatctttcatttcgcgatactatcttttatttcgc
gacactatctttcatttcgcgacactatcttttatttcgcgacactatct
ttattaaaacgacactatcttttttaaaacgatactatctttccaaaaaa
acattatcttaattgaaacaatactatcttaTTTAcgggatactatcttt
tttatggaagccgagaagtgccatcgacaaaaaaatatttaatctcagaa
aaaaataataaattttagaataaaagaatatttaattttagaaaaataaa
tttgaattcagagaaaaataattgattttagaaaaacgatttaaatttag
aaacaaaatatttaattttagcaaaataaatttaaattgggaaaaaaata
tttaactttattttagtaaaaaaaaaaaaacttagaaaaattatcaattt
agagaaaaaaatttaattttactttagaaaaaaaattaaaaccttaaaac
atACCTTATTAATTGGAACTACTtctcgcgggttttaattttagcgcttT
TCGTGGTTTGTTATGTACATTAATTTTTGTTACCGAAATCTAACGCAACC
GTTACCTACCTTTTTATGATACtctacttttatgcaaaaaatgagaaaaa
tttttaccTACGTTGTTATTATGGGGAAAAAATGTCAGCGGAAagcaagt
gacgaaaattttgaaggggtgacgaaatttttccccaacaAAATTTATTC
CCAACATTTCATCACctgaccaaaactttttttacccgatttttttattc
ccgaccaaaaacttttactcaatttttcccCAAACCAAActtcaaatcca
aattttttacacctttattaaccgaaattagtgttttataaacgtcgaat
tacaagatctattttcgagctaACTAAGTGAagaaaaccatttcatttgg
acagtTTAGTCATGTGAAAGTGACTagctaaattgtaaatttggtcgggg
aaaagtgacgaatttgaaattttggtcgggagaaagtgaagaaaatacCT
CTAGGTGACGAtttttttCCCTGACGAAATAAAActtcgacattttttcc
ccaataAATAAAAGGTATTAAATATTGAGCATAATATCGGTTCTGTCAAC
TTGAATTGATTGTGGATTGACATCTATGtgatgtgcaaaaaaataatctg
GTCTGAACAAAAGTGAAATCCAAAAACAAATCCAGTAAGtatgaaaacga
aagttgtaaGTAAGTGTGTGGCCCGGGAGGAATCAggccaaaaagttttt
cttttttcaaatttttttcagacgGTGGACTTTTGGTGTAAGCATGCACG
GAATCAGGCTCtcccaaaaaaacagttttttctgaagtgaacttaatttt
ttctctaaattgatattttttctaaatttaatttttcttactaaaagtaa
atattttttttctaaaattaaatatttttttctcgatggcacttctcggc
ttccataataAAAATGGTATCTTGtgaaaaagatagtattgtttcaatta
aaagaatgtttttttgggaaaatagtgtcgcgaactgaaagatagtgtcg
cgaactgaaagatagtttcgcgaaatgaaagatagtgccgcgaaatgaaa
gatagtgccgcgaaatgaaagatagtcccgcgaaatgaaagatagtgccg
cgaaatgaaagatagtgtcgcgaaatgaaagatagtatttatttccgctt
tggcgcacCATATCATATATCATTTTACCTGACAGTTGCTTTGttattac
agaaaaatgttttgtaCACTGCTTTTTCTTTTAGGGTTGGATTGGATGAA
GCAGAATTCCTTTGCAGTATTTGCCAAACAGAATATAAAATTGCAGATGT
AAGCATATCATTTCTCCGTCTTGTCTATTAGTGTTGCGTACatattttcc
tgaaatttttttaattatattttcttattaAGTCAAGGGCTTTCTTTTGC
CACAGTTATCTTTAAAAATAGTTCTGACTCAAGATAGTTTTACAAAATAG
CTTTACACAAGCTCGAATTTCGAATAAAAGGGGACTCGAATAGCTGGATG
TCTACTGTCCTTACAGTTGATACACTCTAATATATCTAACTATtctcggg
tatctaatagcCACCCTCCCCCGCCaattaagtttttgaaaatttcccac
cgaggacattcttattccaactccccccccccgcttattgattttttagg
aaaatgtttttaaaagttcccTTTTTCAGATTGGATGTTGGCGCTTTCAa
tgctcaaattttttctgtgtatttagaccttttcataaattacgtcacga
acatcacttgcctcgtattcaaacaattaccatggtgattgtgtcccttg
agacattaaatgattcttttatgaataggaagtagttttaataaaacctg
ctgggagttaatcaccatggtaataatttcaaaacgaggcaagtgatgtt
cgtgacgtaatttatgaaaaggtctattcgccGGTCCTGAGCTTGGCTCA
TATCATGaaattgtctttttcttttaaatgttaGAAAAACGCAGTCCGAT
CGACAGATCGCATGATTCAAACGACTCTTCAAGTGAAATGCTTGCAGAAA
AAGTGTCAATGGGTCGGATGTATCATGGATTATGAGGTATGAGGtatttc
actttaaaaaaatcaaaattgaattcACTGTATATTTCAAACAAATCCGA
TTTCTATGCCTTTCGCCTATGCTCAAGATCAATTCTTTTGAGTGCCAAAA
CTCTATGATTTTTTAAGTGCTCATCAATTTAACGGTTAGTAGAAGGAATT
TTTTCAGATTCTTGATCGTCCCCCgggggggggctactcgatttcgaaac
gacggtatgtgccgcgaaAAATCTGCTTTTTAAAATCGTGCatttacagt
gcagttcaatatggctgaaaaggtacccttttcaagaaaaactgaGCAAA
TTATTCTTATCAACTGttattatcagacaatagaaacttttaaaaaaaac
gagaagtaaaaacctttctttttatcaataattttgaatttgttttaaaa
ttcgacccttgcagtgcaatctcacagaaacacaccctttcagtgcatat
ttttgggatgctgaaaaaccccaaccttaagcgcggcacatgacgtaggc
cagatcatatgagtgcccccccccccccggtgatCGTCACTtgaattttt
tagtcaaagcacttgttttTGGAATGTATAATGactcatagctgtcaact
tcgcctcacaaaaatgcgggagagctccaagtcggaaaaactttccccga
taatccgatttttcaaaatcggaaaatcggaaaatctgGGAAATTTTCTC
GTAAAATccgattttattggaaatttttttcgcgaaattggGGAATTTTT
CGTTCCGATCTTTCAAAATCCAGAAATTTCGCCGTTTGGTTTttacaaaa
tcagaaaatttttggaaatgcgggagatgcgggagaaaatcccaaaaatg
cgggagatttggcaGAATTTTCTTCACGCGGGAGAAATCGTTGACATGCG
GGAGTCTCCCGCtcaatgcgggagagttgacagctatgtaatgtataaga
aatcaaatttacatttacatccaattttttttcggagaATAGTGTAATTC
ACAGACCAGAAAAGAAAACGTCCGAAAATCACCGAAATCACAATGTATGT
AATGTAATGTGGCTCAATGTATCTTTAAAAATTCAACTTACTGTAGGGGT
TAACATTCCTTTAATTGTGAATTCACAGGTCCACAAGATAAATCGATGTA
ATTTTGAACTAATCCGATGCTCGTATTACGATTTGGGATGTTTGACCAAT
GTAAGTAAAGCGTCCACGTTCGATTTTGTAAAGTATCGTTCACGAAGCAC
CCAAAACACCCCTGTATCGCCCTCgtaaaaaaagttgagaaaaccATTCT
GTGGTGATTCGAATTAGTTGTACGGAGACCATCCTAGGCGATTCCAGGGC
GAACATCACCAACGTTTTTATTTGGATATTATTTGATGAGTTTTACGCCT
GGTACGCGATCTCGAAAGTTTTTCTTATACACTTCACAAACGCGCTTGCT
TCAAAATAACAGAATTGAGCTGCTAGACAAGCTGTGCTCAAATTTGTCGA
AATTTTTTAAGGGTCTAATTTTGAGACCCTCATTATGTCCACACATACGG
TAGCTTTTCAGATTAAAGATGAATACACCCTGGGGGAGAGGGTATTTGCA
ATCTTCTCTGTGCAATCTGTCGATTTATTCGCCAGAATTGAGATTTAAGG
AATAGAGCTCatacaaaacaaattttgtttttcgtttCGACAGATCCTAA
AAGGGGATGTCCAAAAGCACAACCAAACAAACCGCTTCATTCATCACTCT
CTGCTTTTGACAGCAGTTAGTGCTTTTTCTGAAGAAAGAAAAGGATATCG
TCAAAAGATCGAAAGTCAAGACCTTAAAATCCAAAGTCTTCAAGACGAAA
ATAATGAGAGATTTCAAGCTTTGGAAAGGAGAATGGATGCACAAAGCAAC
CTTGTTGATGGTGTTGTCAAGAAAATGCAAGcactggaaaaagaaaatgt
tgatttagtagaaaaagtgaagcaacAGGACAAGACAATCGAAGAGATGT
ACAAGGAAGTTatcagaaaaaaagttgaagcaGAAAAGAATATTCTTGAg
gtacaacaacaacaaaatcatAGAAACAACCAAGCTCTTTTCAGATTatc
agaaaatgataaaaatgataaactACGTAAAAAGATATATTGTTCAGTAG
CTGGTTGTGATCAGAATGTACGCTCAATAAACGATAATCAATGTGAACAC
CATTACAATTTCAACCAACAGAAACAAGTAGAGAAGAAAATCGAGAAGGA
AATGTGTTGGAATTGCAACAACAATTTTGCAGATGATAACGCTCTTGGCA
CGTGTACAGTATGCGTGGCGACGCAAGATAATCTCATCAAAGAAGCGCAA
CAAGTTGATCTTTTCAGTTTACCGGACCTTCCCCGGGTCCAACAACCTCC
ACCACAAGCAGAACGTCGTAAACGAGCAGATCGATGGCAATCGCATTatt
caaagtaa Coding sequence (CDS) from alignment at sc0000001_pilon:3499123..3504880+ >XLOC_032562 ID=XLOC_032562|Name=XLOC_032562|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2658bp|location=Sequence derived from alignment at sc0000001_pilon:3499123..3504880+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCGAATAAACAAAACATCATCCAAGAAGAAGAAATGGCAAGTCA
GGCATGCGCAGTACAAACTGATCATTCGAAATGTTCCATTTGTCTAATGC
CATTGGTCAACCAAGGTTCTTCAAACAAATGTCACCAATGTATGGCAAAG
ATTGATTCTGTACCGAATGGTTTCCCTTTCGAGACCGTAGGACCAGAGAG
AAAGGAATTTGAGTGTCCAATTTGTCTATGCATCATAAAAAATGCTACCG
AACTCCCTTGCGAACATTTAATGTGCAAAGAATGTTTGGAACACTATGAA
AAGGAACAAAATGAAAGAGCTAAAAGATGGCTTCGAATAAACAAAACATC
ATCCAAGAAGAAGAAATGGCAAGTCAGGCATGCGCAGTACAAACTGATCA
TTCGAAATGTTCCATTTGTCTAATGCCATTGGTCAACCAAGGTTCTTCAA
ACAAATGTCACCAATGTATGGCAAAGATTGATTCTGTACCGAATGGTTTC
CCTTTCGAGACCGTAGGACCAGAGAGAAAGGAATTTGAGTGTCCAATTTG
TCTATGCATCATAAAAAATGCTACCGAACTCCCTTGCGAACATTTAATGT
GCAAAGAATGTTTGGAACACTATGAAAAGGAACAAAATGAAAGAGCTAAA
AGGGTTGGATTGGATGAAGCAGAATTCCTTTGCAGTATTTGCCAAACAGA
ATATAAAATTGCAGATGGTTGGATTGGATGAAGCAGAATTCCTTTGCAGT
ATTTGCCAAACAGAATATAAAATTGCAGATAAAAACGCAGTCCGATCGAC
AGATCGCATGATTCAAACGACTCTTCAAGTGAAATGCTTGCAGAAAAAGT
GTCAATGGGTCGGATGTATCATGGATTATGAGAAAAACGCAGTCCGATCG
ACAGATCGCATGATTCAAACGACTCTTCAAGTGAAATGCTTGCAGAAAAA
GTGTCAATGGGTCGGATGTATCATGGATTATGAGGTCCACAAGATAAATC
GATGTAATTTTGAACTAATCCGATGCTCGTATTACGATTTGGGATGTTTG
ACCAATGTCCACAAGATAAATCGATGTAATTTTGAACTAATCCGATGCTC
GTATTACGATTTGGGATGTTTGACCAATATCCTAAAAGGGGATGTCCAAA
AGCACAACCAAACAAACCGCTTCATTCATCACTCTCTGCTTTTGACAGCA
GTTAGTGCTTTTTCTGAAGAAAGAAAAGGATATCGTCAAAAGATCGAAAG
TCAAGACCTTAAAATCCAAAGTCTTCAAGACGAAAATAATGAGAGATTTC
AAGCTTTGGAAAGGAGAATGGATGCACAAAGCAACCTTGTTGATGGTGTT
GTCAAGAAAATGCAAGcactggaaaaagaaaatgttgatttagtagaaaa
agtgaagcaacAGGACAAGACAATCGAAGAGATGTACAAGGAAGTTatca
gaaaaaaagttgaagcaGAAAAGAATATTCTTGAggtacaacaacaacaa
aatcatAGAAACAACCAAGCTCTTTTCAGATTatcagaaaatgataaaaa
tgataaactACGTAAAAAGATATATTGTTCAGTAGCTGGTTGTGATCAGA
ATGTACGCTCAATAAACGATAATCAATGTGAACACCATTACAATTTCAAC
CAACAGAAACAAGTAGAGAAGAAAATCGAGAAGGAAATGTGTTGGAATTG
CAACAACAATTTTGCAGATGATAACGCTCTTGGCACGTGTACAGTATGCG
TGGCGACGCAAGATAATCTCATCAAAGAAGCGCAACAAGTTGATCTTTTC
AGTTTACCGGACCTTCCCCGGGTCCAACAACCTCCACCACAAGCAGAACG
TCGTAAACGAGCAGATCGATGGCAATCGCATTattcaaagtaaATCCTAA
AAGGGGATGTCCAAAAGCACAACCAAACAAACCGCTTCATTCATCACTCT
CTGCTTTTGACAGCAGTTAGTGCTTTTTCTGAAGAAAGAAAAGGATATCG
TCAAAAGATCGAAAGTCAAGACCTTAAAATCCAAAGTCTTCAAGACGAAA
ATAATGAGAGATTTCAAGCTTTGGAAAGGAGAATGGATGCACAAAGCAAC
CTTGTTGATGGTGTTGTCAAGAAAATGCAAGcactggaaaaagaaaatgt
tgatttagtagaaaaagtgaagcaacAGGACAAGACAATCGAAGAGATGT
ACAAGGAAGTTatcagaaaaaaagttgaagcaGAAAAGAATATTCTTGAg
gtacaacaacaacaaaatcatAGAAACAACCAAGCTCTTTTCAGATTatc
agaaaatgataaaaatgataaactACGTAAAAAGATATATTGTTCAGTAG
CTGGTTGTGATCAGAATGTACGCTCAATAAACGATAATCAATGTGAACAC
CATTACAATTTCAACCAACAGAAACAAGTAGAGAAGAAAATCGAGAAGGA
AATGTGTTGGAATTGCAACAACAATTTTGCAGATGATAACGCTCTTGGCA
CGTGTACAGTATGCGTGGCGACGCAAGATAATCTCATCAAAGAAGCGCAA
CAAGTTGATCTTTTCAGTTTACCGGACCTTCCCCGGGTCCAACAACCTCC
ACCACAAGCAGAACGTCGTAAACGAGCAGATCGATGGCAATCGCATTatt
caaagtaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3499123..3504880 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 565-1329:4994 |
| Aaloc | 493-564:4429 |
| Aaloc | 391-492:3185 |
| Aaloc | 328-390:2436 |
| Aaloc | 1-324:1 |
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