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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:1052037..1054237+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032107 ID=XLOC_032107|Name=XLOC_032107|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2201bp|location=Sequence derived from alignment at sc0000058_pilon:1052037..1054237+ (Clytia hemisphaerica_ch_hm2_pilon)
TATTGGTGAtcatttttgcttaaaatctagGAAGTAGTGGTTTTTGTTGA
TCACTTTGCTTTCGAAACTATCCTGGTGATTGAAATGAAGGATGGtgttt
attgatatttttaacttgCTTAACTATAGAAATGACTGTAAAGTGAGCAG
AATAGCAACGATATACGTTGAATTAAACAAAACGACAGTTTGTGATGTCA
AAACGAAACTATACAAAGAGACAAAGataccaactgaaaatcaaattatt
tttcgatGCACAGAAAAAtctggaaaacaaaaaaactcgTCAGCAGACAA
ATTTTGGTTAAGCAAGAACAATTCTTTACAAAACGCGTATGAACCTTACA
CGAATGATGGTGATTTTATATTGGACTCAAAGAATTACCAGAGCTGGGAT
TTCACcgattatttattttgtttgtttattgaaCACAGTCTTTACCATAA
TACAAATATCAGACTCCGGCTGTCCAAGATTACTTTCAAGCTTACAGAAG
ACATAGCTCTAGCAACATTTACGCCAAACACTCAAATCCATCCTTGGCTT
TTCTCAATTTCAAGCATATTGAAAAGTGACTTACTAAAAGGATTTCCAAT
TGAAAGAGTTCtattttataaatatacttTTTGCAACATGATTCAATCTT
ACAATGAAGTTACTTGGCTTGATAAGTTGGTAGAAACTTCAATAGTAGGA
GGTGATTTTATAGCCTATATCGGTTTATTAAGACAGCCGGAATCTGAGAG
CTCAAAATCCTCAACGTGTCATCCAGATATAGGATTATGCCGGAGATTAC
CAAATGTCAGTATATTCAATACTCACAACGAAATCATTACCCAATGGTAC
CCTAACAATACTGAATGTACAGGATTAATTGAATTTATCGAAGAAGAATT
AAATATTCCAGTTGATTGCCAAGTGCTATATTACAATGGAGTTTACTGGA
ATGGGAACAAATCGTTACTGgatataatgtttttgaatggaCAAGAGTCT
ACTTTAGAATTTCAAATTGCCTGCACAAGATGTCCAAAAGATTccgaaaa
tgattttaaaatgtcttttgaaaaatacaacttGCAAGCTTTCGCTCCGT
CCGTATTTGGATAAGGAATATGGCAAAGTTGTCTTGGACAATTTCTTGGA
TCATATAAGTGGTGATTGTTGGACGTGGGTTATCTTTTTACGATCAATGA
TTACTAAAATGTACGGTATCAAAAATTATTCCATACAAATTTTTGACAGT
TATGGTCAAGAAGTCAGTGCTAATTTATATTTGATGCCTTTTTTCGTCAA
TGATGGTAAATTCAATGAAGATATATGTCTTTATATAAAAATCGCATCGA
GTGATaagcaaaagttttatttcaaattgttcggCTTGCAGACTGTAGTG
CTCCGATCTTTGACTAAAACACAAGAGTTGGACGTTTCTAAGTATCACTC
GGTGAAATCAATAAGAAATTTTATGGaaagagaattcaagattcCTTCAC
ATTTACAGATATACATGCTTAAACAGAAAGAGGTTGAAAATACTGACGAA
TTTTATCATCTTTTCAGGCAATATGCTAGCCCTGAAGAAAGGAGAAATGG
GAAATTATATATCAATTTAATCACTGATGTTCCAAAAGAGATTGAAATCG
AATGCCAAACAAACCCTTACAATCCAAATAGATATCGGAATATAATACCA
GCATCTTTCAAAGTCAAAGAAACTGATTCTATCATAGATGCTGAAAACAA
ACTTTCTGAATTATTATCGTTCAGAGTAAGCTTGCAACCACCACAAGGAC
TTTTTAGTGAACGTGAATGTTTTTTAGTACCAAAAGACCAATACCAAATT
TACGAGCTAGTCAGGGCATGTAAAGAAACGCCCTCGTTGTTAGTCAATAG
GGTGATAACCATCAATTTTCATTCCTGTAGAAAGTgccttcattcttttt
tatttcaaaaatcccTTGAATTAAGGGGTGGCATGTGTTTGAAAGCTATT
GGTCAATATTTAGCTGGATGTAACATAGAATATATGGACAATCTTTGTTG
TGATAAAACGGCatggaaaatgtcaaaagatATGCAAACACAAATTtcga
agaaaacatttttaatagaTATTCCTTTTGGTATGGAGTCTATAGACGTT
CAAGCAGAACATTCTACTAAACTATCCTTTAAGAAGCTTCTGTGGAAATA
A Coding sequence (CDS) from alignment at sc0000058_pilon:1052037..1054237+ >XLOC_032107 ID=XLOC_032107|Name=XLOC_032107|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4402bp|location=Sequence derived from alignment at sc0000058_pilon:1052037..1054237+ (Clytia hemisphaerica_ch_hm2_pilon)
TATTGGTGAtcatttttgcttaaaatctagGAAGTAGTGGTTTTTGTTGA
TCACTTTGCTTTCGAAACTATCCTGGTGATTGAAATGAAGGATGGtgttt
attgatatttttaacttgCTTAACTATAGAAATGACTGTAAAGTGAGCAG
AATAGCAACGATATACGTTGAATTAAACAAAACGACAGTTTGTGATGTCA
AAACGAAACTATACAAAGAGACAAAGataccaactgaaaatcaaattatt
tttcgatGCACAGAAAAAtctggaaaacaaaaaaactcgTCAGCAGACAA
ATTTTGGTTAAGCAAGAACAATTCTTTACAAAACGCGTATGAACCTTACA
CGAATGATGGTGATTTTATATTGGACTCAAAGAATTACCAGAGCTGGGAT
TTCACcgattatttattttgtttgtttattgaaCACAGTCTTTACCATAA
TACAAATATCAGACTCCGGCTGTCCAAGATTACTTTCAAGCTTACAGAAG
ACATAGCTCTAGCAACATTTACGCCAAACACTCAAATCCATCCTTGGCTT
TTCTCAATTTCAAGCATATTGAAAAGTGACTTACTAAAAGGATTTCCAAT
TGAAAGAGTTCtattttataaatatacttTTTGCAACATGATTCAATCTT
ACAATGAAGTTACTTGGCTTGATAAGTTGGTAGAAACTTCAATAGTAGGA
GGTGATTTTATAGCCTATATCGGTTTATTAAGACAGCCGGAATCTGAGAG
CTCAAAATCCTCAACGTGTCATCCAGATATAGGATTATGCCGGAGATTAC
CAAATGTCAGTATATTCAATACTCACAACGAAATCATTACCCAATGGTAC
CCTAACAATACTGAATGTACAGGATTAATTGAATTTATCGAAGAAGAATT
AAATATTCCAGTTGATTGCCAAGTGCTATATTACAATGGAGTTTACTGGA
ATGGGAACAAATCGTTACTGgatataatgtttttgaatggaCAAGAGTCT
ACTTTAGAATTTCAAATTGCCTGCACAAGATGTCCAAAAGATTccgaaaa
tgattttaaaatgtcttttgaaaaatacaacttGCAAGCTTTCGCTCCGT
CCGTATTTGGATAAGGAATATGGCAAAGTTGTCTTGGACAATTTCTTGGA
TCATATAAGTGGTGATTGTTGGACGTGGGTTATCTTTTTACGATCAATGA
TTACTAAAATGTACGGTATCAAAAATTATTCCATACAAATTTTTGACAGT
TATGGTCAAGAAGTCAGTGCTAATTTATATTTGATGCCTTTTTTCGTCAA
TGATGGTAAATTCAATGAAGATATATGTCTTTATATAAAAATCGCATCGA
GTGATaagcaaaagttttatttcaaattgttcggCTTGCAGACTGTAGTG
CTCCGATCTTTGACTAAAACACAAGAGTTGGACGTTTCTAAGTATCACTC
GGTGAAATCAATAAGAAATTTTATGGaaagagaattcaagattcCTTCAC
ATTTACAGATATACATGCTTAAACAGAAAGAGGTTGAAAATACTGACGAA
TTTTATCATCTTTTCAGGCAATATGCTAGCCCTGAAGAAAGGAGAAATGG
GAAATTATATATCAATTTAATCACTGATGTTCCAAAAGAGATTGAAATCG
AATGCCAAACAAACCCTTACAATCCAAATAGATATCGGAATATAATACCA
GCATCTTTCAAAGTCAAAGAAACTGATTCTATCATAGATGCTGAAAACAA
ACTTTCTGAATTATTATCGTTCAGAGTAAGCTTGCAACCACCACAAGGAC
TTTTTAGTGAACGTGAATGTTTTTTAGTACCAAAAGACCAATACCAAATT
TACGAGCTAGTCAGGGCATGTAAAGAAACGCCCTCGTTGTTAGTCAATAG
GGTGATAACCATCAATTTTCATTCCTGTAGAAAGTgccttcattcttttt
tatttcaaaaatcccTTGAATTAAGGGGTGGCATGTGTTTGAAAGCTATT
GGTCAATATTTAGCTGGATGTAACATAGAATATATGGACAATCTTTGTTG
TGATAAAACGGCatggaaaatgtcaaaagatATGCAAACACAAATTtcga
agaaaacatttttaatagaTATTCCTTTTGGTATGGAGTCTATAGACGTT
CAAGCAGAACATTCTACTAAACTATCCTTTAAGAAGCTTCTGTGGAAATA
ATATTGGTGAtcatttttgcttaaaatctagGAAGTAGTGGTTTTTGTTG
ATCACTTTGCTTTCGAAACTATCCTGGTGATTGAAATGAAGGATGGtgtt
tattgatatttttaacttgCTTAACTATAGAAATGACTGTAAAGTGAGCA
GAATAGCAACGATATACGTTGAATTAAACAAAACGACAGTTTGTGATGTC
AAAACGAAACTATACAAAGAGACAAAGataccaactgaaaatcaaattat
ttttcgatGCACAGAAAAAtctggaaaacaaaaaaactcgTCAGCAGACA
AATTTTGGTTAAGCAAGAACAATTCTTTACAAAACGCGTATGAACCTTAC
ACGAATGATGGTGATTTTATATTGGACTCAAAGAATTACCAGAGCTGGGA
TTTCACcgattatttattttgtttgtttattgaaCACAGTCTTTACCATA
ATACAAATATCAGACTCCGGCTGTCCAAGATTACTTTCAAGCTTACAGAA
GACATAGCTCTAGCAACATTTACGCCAAACACTCAAATCCATCCTTGGCT
TTTCTCAATTTCAAGCATATTGAAAAGTGACTTACTAAAAGGATTTCCAA
TTGAAAGAGTTCtattttataaatatacttTTTGCAACATGATTCAATCT
TACAATGAAGTTACTTGGCTTGATAAGTTGGTAGAAACTTCAATAGTAGG
AGGTGATTTTATAGCCTATATCGGTTTATTAAGACAGCCGGAATCTGAGA
GCTCAAAATCCTCAACGTGTCATCCAGATATAGGATTATGCCGGAGATTA
CCAAATGTCAGTATATTCAATACTCACAACGAAATCATTACCCAATGGTA
CCCTAACAATACTGAATGTACAGGATTAATTGAATTTATCGAAGAAGAAT
TAAATATTCCAGTTGATTGCCAAGTGCTATATTACAATGGAGTTTACTGG
AATGGGAACAAATCGTTACTGgatataatgtttttgaatggaCAAGAGTC
TACTTTAGAATTTCAAATTGCCTGCACAAGATGTCCAAAAGATTccgaaa
atgattttaaaatgtcttttgaaaaatacaacttGCAAGCTTTCGCTCCG
TCCGTATTTGGATAAGGAATATGGCAAAGTTGTCTTGGACAATTTCTTGG
ATCATATAAGTGGTGATTGTTGGACGTGGGTTATCTTTTTACGATCAATG
ATTACTAAAATGTACGGTATCAAAAATTATTCCATACAAATTTTTGACAG
TTATGGTCAAGAAGTCAGTGCTAATTTATATTTGATGCCTTTTTTCGTCA
ATGATGGTAAATTCAATGAAGATATATGTCTTTATATAAAAATCGCATCG
AGTGATaagcaaaagttttatttcaaattgttcggCTTGCAGACTGTAGT
GCTCCGATCTTTGACTAAAACACAAGAGTTGGACGTTTCTAAGTATCACT
CGGTGAAATCAATAAGAAATTTTATGGaaagagaattcaagattcCTTCA
CATTTACAGATATACATGCTTAAACAGAAAGAGGTTGAAAATACTGACGA
ATTTTATCATCTTTTCAGGCAATATGCTAGCCCTGAAGAAAGGAGAAATG
GGAAATTATATATCAATTTAATCACTGATGTTCCAAAAGAGATTGAAATC
GAATGCCAAACAAACCCTTACAATCCAAATAGATATCGGAATATAATACC
AGCATCTTTCAAAGTCAAAGAAACTGATTCTATCATAGATGCTGAAAACA
AACTTTCTGAATTATTATCGTTCAGAGTAAGCTTGCAACCACCACAAGGA
CTTTTTAGTGAACGTGAATGTTTTTTAGTACCAAAAGACCAATACCAAAT
TTACGAGCTAGTCAGGGCATGTAAAGAAACGCCCTCGTTGTTAGTCAATA
GGGTGATAACCATCAATTTTCATTCCTGTAGAAAGTgccttcattctttt
ttatttcaaaaatcccTTGAATTAAGGGGTGGCATGTGTTTGAAAGCTAT
TGGTCAATATTTAGCTGGATGTAACATAGAATATATGGACAATCTTTGTT
GTGATAAAACGGCatggaaaatgtcaaaagatATGCAAACACAAATTtcg
aagaaaacatttttaatagaTATTCCTTTTGGTATGGAGTCTATAGACGT
TCAAGCAGAACATTCTACTAAACTATCCTTTAAGAAGCTTCTGTGGAAAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:1052037..1054237 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1108-2202:1107 |
| Aaloc | 1096-1107:1094 |
| Aaloc | 97-1092:98 |
| Aaloc | 28-93:31 |
| Aaloc | 1-27:1 |
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