XLOC_031924 (mRNA) -

Overview


Name	XLOC_031924
Unique Name	XLOC_031924
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000329_pilon:131985..147579+
coding sequence from alignment at sc0000329_pilon:131985..147579+

mRNA from alignment at sc0000329_pilon:131985..147579+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_031924 ID=XLOC_031924|Name=XLOC_031924|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=15595bp|location=Sequence derived from alignment at sc0000329_pilon:131985..147579+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACtcctattttttgttttaactagagaatttaaattaaaaactcA
AATGATATTTAACATAATGTCGACAGATGCAAATGATTCAACTGAAGGCT
CATTTGTTACTATGCAAGATGCGGTCAGTGCAATGGAAAGTGAAGAAGAA
CATTCTATTGCTGTGTTTGGGGCAGGAGATGAGAAAAATTGTACATACAT
TATGGTGAGATTTATGACTTCTTTCACTTATAATTCAATGTGATCTTTGC
TTAGTTCCTGCTGAATAGGAAAATTGATGTTGTAATTCTCAAAATGACTT
GCTCTATAATAAGGCAATtgttaaaatttatttcaaaacaaagaaaaatg
gcCTTTGTAATCTTACGAACTGTTCTTATAACAGACAATATAAAATTTCC
ATCGGCTTCTTAATTTGACGCTCCTTCGTATATTAATTTTCTTAAGGAAA
AATAATCAAACCgttctttgaaaatttcatttaaagttcatgtaaatatt
tcctattttcaaaggaaattaaCCTATTTTGTAATAAGTGAATTTGATAA
GTCCCTTAATTTTCAGGGGAAGCCTTTATTTTCAAGGGAAACTACACTTT
TCCAAAGGGGTAAGTTTGTATTTTCAAGGGAAAATGACTtgttcactttt
attggtaaaCTGTCTGTCTCTATAAATgaataatcaattttaatgatgaA
GACTGTATGCAATCACACATTGTAAACAGTGAGTTGACATAACTTGAGAG
CATAAATTGGAATGTGGATATCATTCACTCAAAAAACTGACACACTGAAA
ATAGGAAGCAAGGCTAAGGATTTCAATACATATTCAAAAATATCCTAcat
ggaaaaaaggaaaaaaaatcaagattttgtgccatttttgcagataaaag
aatttcaaattatCATTGAGACAAAACCCTTCGTAAATTAATTCtattaa
aagtattttttttggcCTGAGGGGGGCCAAGAGGTCCAGCAGCAATTTGT
ACCTGATTTGATCTAAAAAACGTTGGAAAAGCCTACCTAGCCTCCTTTCG
TTCCAATATCTTTCaactgaattgttttttttcgagAACCAAAATTCACA
GCTGACATGGGCAAAGATTGAAGTTTCTCAAGTCCAAAAATGGTGCTTAT
ACTTATAGCATTGCTAgataaaaagctgatttttggacctaccccggtgg
aggtcctataaattaacctctgttcgtccgttcgttcgtttgttcgttcg
ttaccaacttttctcgagattggctcattagttttttctgattttttgca
caaagaatgCATAAACCCTCGATGTGACAGAGctgatttcgaaaaaaaaa
aaaaatttttgggcaatttgggccaaaaaaacggctaaaaaagggtattt
tggactttgtgaaaaattggatcattaattttttctgattttttgcatga
aagtagggtaccatcataggtaaaaagatttctcaagcagattttcgcgc
aaaaaaaattttggccaaaaaacgcatgtttaatAAGAATCACTTtaaaa
gcatacatcaatgtctTAGTCAAGTATCAATTTtggatagatgttttttt
tgctcatgagggttactttgaagaatatgtgtgttttaGAAGGAAATTTG
TTGCTTGcgttttttatggaaaaactggccaaattcgaatTTCTTTATAG
CATTtccaattacttaggtattagcttttccgAGATAGGCTTTTTCAttg
tttattatttttgcacaaagatgcataactataaaccacTTGATGGGACA
GAGcccgaatttcgaaaaaaaatgtttttgagcaaatttgggcTAaaaaa
cgggTtttttggactttgtAaaaaattGtaTCattaattttttctgattt
tttgtatgaaagtagggtactatcataggtaaaagatggctcaagcagat
ttttgcaaaaaaagtttgttggctcaaaaaaggcatgtttatctataatc
actattaataagcatacatcaatgttcttagtcaaattactcaatttttt
tatgagatagatgttttttttgctcatgagggcttacttttaaagaatat
gtgtgtttagacataaaattttggttgcttggcgtgattttatagaaaaa
ctggccaaattcgatatttttttataagcacattatcaataacttaggta
ttagcttttctcgagattggctgttttattctttatgattttttgcacaa
agatgcataactataaaccctcgaatgtgacggagctcgatttttgagaa
aaaatttttgggataaatttcagctaaaaaacggccaaaaaaagagtttt
ttggactttgtgaaatattggatcattgtttttttctgattttttgcatg
aaattaggtaaaagatggctcaagcagatttttgtaaaaaataatttttc
agctcaaaaaacgcatctttatccataagaatcactattaataagcataa
attaatgttcttagccaaattggtcaattttttgacgagatggatgtttt
ttttttttgctcacgaagtcttgaatatgaaagaatatttcaagagcatg
aaattttagtttctaaatgttttttttataagaaacaaatgactaatttt
aatagatcgtcaatatttgtgttctgaatgattgtttaatggtcacgtca
cgtagatatcaattataaatgtgttaaatgcatatccaggtaggtccata
aaagtatcacttgtttctttttcatttatcatcttcgtgtttgaaaattt
tagaaaaattttatacacataatattccactcaggattgcctttccaaaa
aatatataatcgCTATCTAATTtgaaatctatcaaaagtaatatgtaatt
gaaaatttactgccagctaatttgaaatgtactttaatatattatctgta
aaaattctttaatcctgttgcatttacttagataaaaaatctgtctggca
agggatttgcaccctgacttacaaaaccttgataatctggCATGAACCTT
CAGTACTTAGATTATCTCCtatttcttagggcatttattctatttagcaa
taagctaacctaattgttgtatttgtttgattctttgaaaaggattttcg
aaaagatttgacgtgacattggcttaggggtcatCTAAagtatttggcaa
ccaggggttacctaaatcttagggctCACCTGAATTCTTATTTTTCGGAG
GGGAATGATCTTaaaactactttaggcgtaccaACGGAATTGGAAGAATA
TATTTAACTTGACTGAGTTCAGGGATCCCActcctcctaaaattcctaaa
aatcctaaaataagtcaaaactcctaaaatcctcctaaaactcaacaaat
tctcctaaattcctaaaatctgaaaacTTTATCAAGCACAACGGTAGCTG
ATTATGTTTGTATATTTGTATAATCAGACaagaaacaaagatttttttct
cattaaagtcaaaacaaactggGAGTAGTAAGCTACCTGACCTTGAAACA
ACAtgcttaaaatatatttttgcacTGAAATATTTGGAACAAAAGCCTAT
GTTTATTGAAAGAGTGCAGACTTTATTCCACAAAGAGGGCTCAAATATTT
AAGAGCAAGGTTTGGTGGTGGTTTGCGCCCTCatctgtgaatttttttat
ttgagcatagaatgcacccccccccTGAACTTAtgggggggggctaaacc
atttttgcttgattgggggctgtattttaaaatactggggctagcttgct
agggggtTGAGTGTTAAGTAATAGAACTGGGGTCAGAGCTGATAggttac
aaatattttaaattatgctaaaaatctatgctgtggggaaggttttgacc
cctcttaaaaaaaatttttgtctgcGGCGCAATAAATTTATTATGAATTT
GCATATTAAATTTCGATGCTATTTGGTTTTGTGAAAGTGGAGGCTAAGTT
TTAAGAGTTTTTCTGGGGCCTTTTTTCCTTAGCCtcccccctgaaaaatg
ctggggactggacccctctgcacactatggcaTAGGCTTTGTTAGAACGA
ATAATATGATACGTAAAGTAATTTTATTTCAGTCTTCCTGtgggtgattt
tttttcgatAGAACATTTTCTAATGGCTGACTTCAGGccgattttagaaa
tttatttcttaaattttcctaaaatgctcctaaaaaattgaaaattctcc
taaaatttgaccaaaatcctcctaaaatttgtcctaaaattAAGGTAGTC
AGGCGTGGGATCCCTGTGAGTTGCTGCATTTAGCAGGCCATTTAGAGGCC
ACAAGAAACCTTTCTCAAACCTTCCCTAACTTTCAGTATATTCAGGCGGA
AATCTCAATTTTTATTTCACCAATATAATTCTAGGGTTACTTGAGTCGGC
AAGCAGTTTTCTCTTGTCAAACCTGTGATCCAACATTCGAAAGAGAAGCA
GGTCTTTGTTATGCTTGCTCTCTGGATTGTCACCATGAACATGATCTTGT
CGAACTCTACACCAAAAGGTTTGTGTCTTCATTTTCAGATCATTTCGTAC
TAgaacttaaagggataatcagatggtttgtaatatttggcatccccttc
tattgtcctgagcaaaatcttaaaatgtttttgcctaactattttccaaa
gtcgagatatttaagttacaagtttttggcttttaggataaaaacaatag
aattttaacgtaagaaccgtgtaaaaacccattttcaaaaattaaaattt
ctaaatcttgacttttgaaaattgttacacaaaaatacttagAGGTTTTG
CTAAGGACCACAGAAGATTTCtgtaatctaaatatctcaaaccatctgat
catCCCTTTAATACTTTAACTAAATTGGAGTGagtagaaatttttcaatt
ctaggTAGAATTTGTACCTCTGCAAAAATGTTGTAATTGtagatcaaaac
aaaatcagGCTTAGTAAggcaggggggggtcggtagtaaaatctcagaca
tatatgagtagtaaaaggatttttacgaatttttacataccaccacccag
actcttggaagaggtatctTACTaacctggtagtaaaagtttttgggaca
atttgtcatgaagaccacctattttttggttgctttcggacaatttacaa
aaaaagctaaaaaacgattatttctgtgacacatttttcactttagtgcg
aaaattaatgttttgcccttagaattaaagtcttttttattttgagattt
tactacTGCTGAGTAAGGAACTTCTTCTGGTAGCTTAAATGGtctttata
aaatttattaaacATGCTTAAGAGAGGGTATTaaagaaatcattttcttc
atAGTGCTTCTTTAATAAATGGGAgcaatgttttaaaaataaatccaaag
ttggtataagcagggggggggtcggtactaaaatccaagacaAATACTAA
AAGGtttgttgatgatttttgacatacccccacctaatttttggaacctt
tttcctcattgggaataaaaattcctattgaaatgctcatggggatagaa
attctattgttccaagattaaaaacccagtggggatggttttggagtgca
atttttaaacatggaatttcgagtggggatgaaatcaaagtcaatttccc
agtggggctgaaattcaagggtattttaccaccggggacaaaatttttgc
ttaatttgtgatgcaggggtgtttaaatcttcttatttagaaagttttta
tttttttcattttgcctaaaacgttctgtcaatagttaaatttcctaaaa
tttcctaaaatttggtgatttttagtactcatgtactaaaatttttctta
agtttcttgaagaccccacctaatttgggattttggtacacatggtacta
aaatgcttaaagtctttttttgtaataccaccaTGTCACTAAAGatcatg
atgtctgaaattttagtaccgacccccccctggtATAAGTCATGTAGATT
TCCCTATTTCTACTGTATGTAGTTGTAAGGCAGGACTTCctcaaaaattg
tttcaaaattaaCTTAGATCCTGCACGAATCGATATACGCTCAAACTTCT
AGAGGTCTTGATTTCGAAATTCTAAACAAGCTTTCTTcttgtgttgttgt
ttttttcaaatggaGAAAGATAGACATTGCttttttttAGGAATTTCAAA
TGTGATTGTGGGAACAGCAAGTATGGAGAGTTTAAATGCAAACTTCAAGA
GGTACATTTTAATTATCtatttttccttcgaaaatacacaaaaacttcat
ttctgtttttgtttagttttcatTGAGAAATAATAACTTTTCCAATCAAG
GAGAAGTTggaatttgatgttccaaaatccACAAACGGGGTCGATCCGGA
TATTCCCAATAACGAGGATTTGTTACATTACCTACCAATGCAAATTTCAT
TTCATGGTCTATCAAAATTCTGTTATccaaatttttgtgattttgaaaca
tttttaagacCTTCAGCCCTAGCGTGTCAGAAGAAGATAATACATCAGGA
GTCAGATACATATTTATTTTGAGATTGTTTTTTGTTGGCTTCCTTTGATA
AAATTTACAGTAGACTCTGGCTAATTCAACcttttattattcgaatattt
ctataattcgaactaatccCCAATCCCTGTAAAAGGGAAACCGtcgtaaa
atgctttctatTCGAATCCTTATGTAATGCGACCAAATTATACTCcctgt
tcgagttcgaattagcgagagtaatTGAATATACATGCACTTATACTTTT
TCGtttagacgaaatcagaaatcaaTGAAGAGAACAAATATAATCATAAT
TTCAAAGGAGAATATTGTACCTGTAACCGACCCTATCCTGACCCTGAGGA
TGAGGtacctgtttgttttttttttttaccaatacTCTGACAACTCACTC
TAATACTGTCTAGTCTGTATACTGTACATGTATCTTCTGGAATAGCACTT
CCAAACATTTTTAAGGCTCCAAATTAAAATAGAGGCAATTAATCAGTCGG
TAACAAGGTTTATTTGAAAGATGTAGTTGAATTTAGTTACCACCGACAAG
TCTCTAACAAATAAATTTCTCAGAATTAAAAATCTTACCTTAAAAAAGAC
ATTCCTTCCATACTGGCTAAAGATTCAAAAGCTTTAATCGTTGGTCACTT
TCAAAGCCAAAACTAAAactttatttactatttttatttAAGTCTTTCTG
TTTTGTACGTTTTCTCTAGTTCTTGTTACTGTTCATAGTTGCCAGCTTTG
TGGAAACACTTCCTCAGCTgcctaaaattgaaacttgaaacaTTTGATAT
TATTATATCAGTATTATTAATATAACTTTCTTAGTGTCTGTTGCTCATCC
AAAAAATGTCTTGTTTTTTATTAAGGTTGATGACGAAATGATTCAGTGCA
TCGTTTGTGAAGACTGGTTCCATTCAAGGGTGAGATTCTCCAGCCGCCTT
TTctttctacacgtttttttaagaacataaggcttcgatggccaaaatgt
taagaataagttaaaaacatttagaggctttgtggactctaaacatccga
ttttttagaaaattgctcGCGAAATGGTGAGtatgagaacatgttaagaa
caagagTTCATTTAAAGGTTtgagatgttcttataaaaataatttatact
TTTAATGAAACGTGTATTAGAAGAAGTGACGAtttttttAACCAGCCTAT
AACAATCATTCTTTGGTTCAAAGTTTTCCtctcaaaatttgacaaaattt
cgaaaatgataTTGCGTGTTAAGTCAGTTCTCACGCGAGTAAATATCACT
TGGTATCGCCAATTCCATCTTCAACAACCCTCTGTAAATTCTCTTGAAGT
CTATTCGTTTTGCACTCATCCTTGCCACCATGTGGAAAACGATCTCTAGA
AAATAAGTTTAATTACACTTAAATGGTTTCAACATGGTAGTAAAAAAGTG
CGCACACTTAAAGAGAATGGACTTCagtatttatgatatgcaccattgca
atgtctttcacggacccaacagctgattggttgaaagtgacgtattaact
gattttacgtcacttgcaaccaatcagctattgggtccgggATGTAATGT
CaaaagacattgtaatggtgcatatcataaatactGTACTGTCTTCAAAT
TCCACAGCATTTGGGCAGCTTACCACCGATGTGTTACGAAGAAATGGTTT
GTGATGGGTGTGTGCAGAAATATCCTTTCTTCAATCACTACAAGCAATTG
ACTGGTAAGTGAGGATTTCTATAAAGGTCCTTTGTGAAACCAAAGTTCTA
TTCGCTTTTTAGCAGTTTCAAGTGAGCGAATTTTTTATTAAGGTCCCTTT
TCATACGGTTTTGTTTGCTTTCTATTTAATCAGCTATCTGATCCTCCCTC
GAAAAGAAAAAGTACACTTGAGTTCTGAATGATCTTCAATTCTTAGCTAT
GTCATACTCGGTTGGTTGAGGTCTCAAGAAAATCGATTTTAACATTCTTT
AAGAgcaaacaaactatataagaacataaggctttggtGGCCAatttgtt
aagaacaagttaagaacattctaatgCTTCTTGGATTCTTATACACCCAA
ATTCTAAGGAAATCgttcaaaaatactcacaaaatcgtgcttttttagat
ttaaaacttagcttcaaagattttggatgttcttataaacagtGTATAAA
AACACAGCAATGTTTGCAAAGTGGAATAAATCCTTTACACCTCTAAACGA
TCTTGTTTTCATCTTAAAGTATGATGATCATATCCACTGACCTCCTAATA
TTCTTTGATATCTACTGATCTCGTCTCATTCTTTGCACAGAGGGACCAGC
CGCAAGATTAACGACCGAAGAAACGACGACATCAATAGACGTCACGACAT
GTCCGTCACCGAGTAAGAAACGAAGGAAAATGTTCGACAATAACAACGTG
GAAGACGATGGACAGCCATCAACCAGTTCACAAGTACGTATCTTGTTCTC
CAATTATCTTTGGTTAAACTCAAGAGCATTTCAAATATACCATTTAATTA
CGGGGGGAAGTACTCGTTGACATCAATTCTTttacatttactaaaaatag
acaaaaagaacgacaaatttcaccaTCCAAAACCCAACCCGGTTAGTTTC
TCCACCCTAAGACTGATATGCAGTCTAACATAACATACTAGATGAATAAA
TTTTAAAGCGTAGGGTATTGTAAATATCGCATTGTCGATTCTGATTACAG
ATTAAAAAATTAAACGCCGCACGTAGCACGTATTAGCTCAAACTCGGTTA
AGAACAGAGCGTAGTGTGCGCAGTGTAGATCTGTCACgagattcatgata
ttcatgacgtaatgtttcttgcggaaataccccggtttttgccagtagtg
gcaaatttaaactacacaaaagttgtataaaatttgccactactggcaaa
aactggggtctttccatagaaaacattacgttatgaatatcatgaattgt
caACTACTGGTTACTCTAAGAGTCAATATCGGTAAAGGATAATTTGTGTA
TCGCACAAGTCTTTTCTCTGGATCGGTTTTAGGTTTCTTTTAATacaatc
tttctttttatttgacagGATTCGTGTAAGATTTCAATACCATTGGACGA
AGAAGCTGGCACAAAAGCTTTGTATTTCAAGTCGAAGTGGAGAAGTGAAT
TATGTCGTTGTTCTAAATGCATGGTAAGTGGGTCTGCATTGAGCGTCGTG
ATGTCttttttttACCTAcatcggaggtcctttaaattaactaaTGTCAG
TTCGTTCGTTTGTTGCctgcttttctcgggattggcttattagatttttc
agattttttgcacgataatgatacaaaatggcaatgcctaaaatgtggtG
GAGCCAATCAGTATCCAGCTTGTTTCATTGTACTATTACTGTAGTCAACT
TCTCTGGACTCGACCATTTAGTGATATGCTTTGTAATAGTATCGAAATCT
TTGACTCCTGATTCGGGATATGTTGATATTTGTGGTATTATATGAAAACA
ACGGGCATTTAATATTGAGTTTGTCTCGAGTAATAAAAGGAAGGGTTTTC
TGGTCTTAAAGCAATGAGTcatgaatataaaaaaatgttgttcaaTTTTC
CGTATATTGTGAAGTTTTGATTACAAACGGAGTGTCAGACCATGTTTaca
cgctacggttccgtttcgctccgaaacgaaatgaagccattctattggtt
aaattcaatttttacttcacttctaaccaatagaatggcttcattccgtt
tcggagcgaaaaTGAACTGTAGCGTGTGAACACTGTCTCGAATGAGTTAC
TTCTCTCATGtttctattattattattataatgtaacaaagttctaggcg
cacgagggcctctggaactgatcgtgattatacgtattttacaattgtct
tgtgttgaatcttttcgggtgtttactccatgcagtgttgagtctttctt
tgaagactttgactgtCTCTGCCTCAGCGAcatcttttggcaatttattc
caggttggtatagttcgataaaagaaggaattcgtttgtacaccacggag
tccatcgcttccaaagtttggaatcatctcaaagttgtgccttctgtttg
gtcgcgttcgacgggctatcttgtctgggatggtatctttttcgtaataG
tTGATGTGCTTGTAAAGTTGGACCATGTCACAAAAGTGTCTTCTAAACTC
GAGCGTGGAAGATCTAATTCACGCAGTCGTTCTTCATAAGACATATTACg
acatttttgaacaagttttgtTGCCCGTCTTTGTACTCCTTCAATCAGAT
TTACGTGTTTACGTAGAAACGGAGACCATACTGACTGAGCGTACTCAGAG
CGGGCGAACAAACGCACAATACAATGTTTAAATGTACTTGTACTCATATT
TACAAATCCTCGATTGATTATGCCAAGTAGCGCGTTTTGCTTTTTTAACT
TGCTTTGCAATGTGTTCTTcaaatgtaagttctgagtcaatgaggattcc
aagatctttttcttcaaagacgtGTTCCAATTGGCGTCCATCTAGGGAAT
ATGGATGAGCATGTTTGATGTTTCCAAACTTTCCTAGCGTCAGAACGTGA
CACTTTTCAGGATGGAATAGTAATAGCCAGTCTTTCGACCATTCTACAAG
TGTGTCTATATCATTCTGAAGGGAAACAGAGTCTTCGACGCAATtgactt
ctttgaagattttggtatcatcagcaaacagtAGGATCCATGAGATGACC
TTTTCaggaagatcattgatgtatagCACGAACAGTATTGGTCCCAGTAC
ACTACCCTGTGGAATACCACTCACTACAGGGTCTGTAGTCGAGAaggact
ggttcacttttactgATTGAGTTCGACTTGTTAGAAATGACGTTATCCAT
TTTAAGATTGAACCGTTGATGCCATATGCTGATAGTTTCTTGCATAGTCG
ACGGTGGGGTACAGTGTCGAAAGCCTTCGCAAAATCGAAGTAGACACTAT
CAACAACGTTTCCTTTAGAGATGCTCTCATAACATTTATCCAGATAGTAC
AAAAGCTTGTCACGGTTGAACGGTTGTTAATGAAGCCATATTgtttgttc
gataaaagattatGATCGAAGGTGCTTCATGATGTGTTCCTCAGTATTGA
TTCCATTAATTTGCACACTACCGATGTCAAACTACAGTCGATAATTGACT
GCCAAATTCTGAGGTCCCTTGTTTTTGTAGATAGGTGGACATGTGCACCT
TCCAATCTTGTGGTAATGCCTTCAATAAAGATTTGTTCATGATTACAGCC
AAGGGTAGAGACAGATAGTCAGATAATTCCGCTAGTACCCTAGGGTGTAT
TTCGTGGACCGAATGACTTATTTGGTTGAGCTCTTCAATTGATTCTTACC
ATCTCCTCAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNAAGATCCTGATTTCGTTGATCTTTATTTCAACATTAT
CTACTTGATTTACGTTATGGTTTTCTTGAATTATTGTTCTCCGATTGTTT
TCGTTTGAGTAAGATTCTTGGCGAATACTACATTCTTCGTGTCTGTCTTC
TTTGTTTGGGATCTGATTTTGACCTTGATGATGTCGAATCCGTTTTTTGA
GTCCCCTCGAACTCTCCATTTATAGATATCAGAGTTATCATTCTCATTTC
TAGTTTTAGCTTTGAACGATAGTTCCCTTACGTTCTTTCTTTCATCTGGT
GTTAGATCTTCAGTTATACTCGTTGTCTTGTATTTTTGGATGCCCTTGAG
AGAAGGAAGGTTTCCGAGAAGTGAAAATTTTTCCTTTTTCGCTAGATAGA
CAGATTAATAAAGGGCGCTTCTATATATGCCTTGCATTTGTTAAAGATTT
ACgtctaaacaaaaaaatatgaaaaagaaaagcttcgaaagaaataaaat
tgttacatgaatttttaaatttttgttttaatccaATATGACATGGCATA
CTTTGACACAAAATATTCTGGATACAACTCCTCCTTTCTTCATAATCAGG
CAATGTACGAAGAAAAAGGGTTGGGCTTTTTGACGAGCGATGAAGATACC
ATTGCAGTGTATGaaaAgaaaggaaaagaaaattcgAGCAGGGTTATGGA
GAGTGCTGCTGATCAGATCTCGCAAATGAATCGAGTACAGCAAGTTGAAC
TCATGAGAGGTAGGTAATGTTTTCCGCAAAGAGCTTGCGAGCGTCCATAG
CTTTACGAGTGTTTCATTTATTGTGTCTTTTttgccatcttttacctacc
aTTAGGTTTTACCAGGGGGTGCcgaatatttggaaaatttcaacagGCTT
TTAAAACGGTGGCATTTTTGTGCAGGCTATTTGTAGTTCTAAATCAACAT
GTATggcatccctgtctcaatatcatgatacagtatgtggcccccaaaac
ggcgatcaaatttgaaatttctctcaaatctagagaaaaattttaaaaat
tttgctgcatgaaaacatttaacatctctactttatttcctggaagttct
ttttcaaaaatttcaatttcaacaatatttttcaatcgcttaaagatagg
tagcttttttctaatggcccccaaaacggaggtttgcgattttagcgatt
tctcgagatatctttaagatatgaatacaaaattttgaccatAgttttGa
aatatgatttagagggtttttggcataaatttatttgataaaactttTTA
CAGTATCCCCCTGGTGGTcAaaatgcaggtttggggcccccaaaacggtg
TGTAgttaaatcaaattattaagcccagtgttacggggaaaaactatgaa
catatttgtgttttccattAATTTACGACCGATGGATgtcaaatttatga
tttttatcatTTCACGATTTTCGATTATTGCAGTCCAAacagaaatttag
aaattttcaatgaCTATTGATTTAACAAcatcttaatcaagtttttgaaa
acaattctcttttgaaaatagttccattcattatggaatatgctgtgaaa
tttagaaaaaagctaactgaaaactgaaaattaagctttaagatattttc
tcctatattttgcataacaatgacagaatttgccgtttttgctgattacg
aaaattttatatataatttaattttgttataactattaactcaaggtgat
aggaatagaattccaagattttttgctttttctcatatttagaattttcg
gttttgtcaatgctgattctagggctccaaaatactggttgaccttcaag
atgctatatcttttacccagcctctaaagtcacagatgtatttgcatttt
ctgaacggcattaggtgtagaaagtttcctataccccgttttcataactt
attttcaatatccaaggagctagagtgagttatatgcaatttttatctaa
ttttggtgttaaaatagctcctttagacgcaaatatgttattttgaatct
gtctcaaaccagcaaaaacatgctcatttttaagtataaccatcattctt
tcaaaatagacaaaaatcatttaattctgataaatatgCAAGTCAGAata
ttcattttaatgaaaacctccgttttgggggccgtctccgttttgggggc
catatactatAGAGTTTATGTACCTTATTGATtgtattcatgacgtaatg
ttttatacggaaacgCCCAAAAAAGACCGGGCgtttgaaactaattttga
attttgaaaaattaacctaGTAGTGGCAAACGGGGTATTTTGGTTgattc
cgtataaaacattacgtaatgaattgTGAATAAAGGTAACTTTTCTATTT
CACAGTCCCATAATTTGACTCATCCTTAAATTGGGATAAATTTTAAGTTA
GAGAAAGTAACTCGCCCATTTTTCATGATGTCAGAGTCACAATATTTATA
TTGTTTCCTTTTCAGGTTATCAAGATTTGAAGGAGAAACTTCACGGTTTT
CTGGAAGGATTTTCTAAAACAGACCAGGtatgtttttgttatttataCAG
ATTTTCTGAAGAAAATACTTTCatactttgagtatgaaattaacttatTC
AAACTCGTATAAAACAGATTGCAAATGTGTTTAGCCTTCTTTATAAATTG
GATATTGTATTCACTTTTCTGCAAGACTCGTGAGTGGATAGtgtagaaat
ctaagctagtagACTCACgcactaggataaatctgatggtaagttgtgtt
GTATTATAATTTAGTAGTTTTcatttgttgtttgttgttctTTCAGGTGG
TGAAGAAAGAAgatattgaaaactttttcgaaGATTTGAATAAAAAGAGA
CGCGAACGTTCGAATAATGGATTACCGCCGGGTTCGTGTAAATAA

Coding sequence (CDS) from alignment at sc0000329_pilon:131985..147579+

>XLOC_031924 ID=XLOC_031924|Name=XLOC_031924|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2430bp|location=Sequence derived from alignment at sc0000329_pilon:131985..147579+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACtcctattttttgttttaactagagaatttaaattaaaaactcA
AATGATATTTAACATAATGTCGACAGATGCAAATGATTCAACTGAAGGCT
CATTTGTTACTATGCAAGATGCGGTCAGTGCAATGGAAAGTGAAGAAGAA
CATTCTATTGCTGTGTTTGGGGCAGGAGATGAGAAAAATTGTACATACAT
TATGATGTTACtcctattttttgttttaactagagaatttaaattaaaaa
ctcAAATGATATTTAACATAATGTCGACAGATGCAAATGATTCAACTGAA
GGCTCATTTGTTACTATGCAAGATGCGGTCAGTGCAATGGAAAGTGAAGA
AGAACATTCTATTGCTGTGTTTGGGGCAGGAGATGAGAAAAATTGTACAT
ACATTATGGGTTACTTGAGTCGGCAAGCAGTTTTCTCTTGTCAAACCTGT
GATCCAACATTCGAAAGAGAAGCAGGTCTTTGTTATGCTTGCTCTCTGGA
TTGTCACCATGAACATGATCTTGTCGAACTCTACACCAAAAGGGTTACTT
GAGTCGGCAAGCAGTTTTCTCTTGTCAAACCTGTGATCCAACATTCGAAA
GAGAAGCAGGTCTTTGTTATGCTTGCTCTCTGGATTGTCACCATGAACAT
GATCTTGTCGAACTCTACACCAAAAGGAATTTCAAATGTGATTGTGGGAA
CAGCAAGTATGGAGAGTTTAAATGCAAACTTCAAGAGGAATTTCAAATGT
GATTGTGGGAACAGCAAGTATGGAGAGTTTAAATGCAAACTTCAAGAGac
gaaatcagaaatcaaTGAAGAGAACAAATATAATCATAATTTCAAAGGAG
AATATTGTACCTGTAACCGACCCTATCCTGACCCTGAGGATGAGacgaaa
tcagaaatcaaTGAAGAGAACAAATATAATCATAATTTCAAAGGAGAATA
TTGTACCTGTAACCGACCCTATCCTGACCCTGAGGATGAGGTTGATGACG
AAATGATTCAGTGCATCGTTTGTGAAGACTGGTTCCATTCAAGGGTTGAT
GACGAAATGATTCAGTGCATCGTTTGTGAAGACTGGTTCCATTCAAGGCA
TTTGGGCAGCTTACCACCGATGTGTTACGAAGAAATGGTTTGTGATGGGT
GTGTGCAGAAATATCCTTTCTTCAATCACTACAAGCAATTGACTGCATTT
GGGCAGCTTACCACCGATGTGTTACGAAGAAATGGTTTGTGATGGGTGTG
TGCAGAAATATCCTTTCTTCAATCACTACAAGCAATTGACTGAGGGACCA
GCCGCAAGATTAACGACCGAAGAAACGACGACATCAATAGACGTCACGAC
ATGTCCGTCACCGAGTAAGAAACGAAGGAAAATGTTCGACAATAACAACG
TGGAAGACGATGGACAGCCATCAACCAGTTCACAAAGGGACCAGCCGCAA
GATTAACGACCGAAGAAACGACGACATCAATAGACGTCACGACATGTCCG
TCACCGAGTAAGAAACGAAGGAAAATGTTCGACAATAACAACGTGGAAGA
CGATGGACAGCCATCAACCAGTTCACAAGATTCGTGTAAGATTTCAATAC
CATTGGACGAAGAAGCTGGCACAAAAGCTTTGTATTTCAAGTCGAAGTGG
AGAAGTGAATTATGTCGTTGTTCTAAATGCATGGATTCGTGTAAGATTTC
AATACCATTGGACGAAGAAGCTGGCACAAAAGCTTTGTATTTCAAGTCGA
AGTGGAGAAGTGAATTATGTCGTTGTTCTAAATGCATGGCAATGTACGAA
GAAAAAGGGTTGGGCTTTTTGACGAGCGATGAAGATACCATTGCAGTGTA
TGaaaAgaaaggaaaagaaaattcgAGCAGGGTTATGGAGAGTGCTGCTG
ATCAGATCTCGCAAATGAATCGAGTACAGCAAGTTGAACTCATGAGAGGC
AATGTACGAAGAAAAAGGGTTGGGCTTTTTGACGAGCGATGAAGATACCA
TTGCAGTGTATGaaaAgaaaggaaaagaaaattcgAGCAGGGTTATGGAG
AGTGCTGCTGATCAGATCTCGCAAATGAATCGAGTACAGCAAGTTGAACT
CATGAGAGGTTATCAAGATTTGAAGGAGAAACTTCACGGTTTTCTGGAAG
GATTTTCTAAAACAGACCAGGTTATCAAGATTTGAAGGAGAAACTTCACG
GTTTTCTGGAAGGATTTTCTAAAACAGACCAGGTGGTGAAGAAAGAAgat
attgaaaactttttcgaaGATTTGAATAAAAAGAGACGCGAACGTTCGAA
TAATGGATTACCGCCGGGTTCGTGTAAATAAGTGGTGAAGAAAGAAgata
ttgaaaactttttcgaaGATTTGAATAAAAAGAGACGCGAACGTTCGAAT
AATGGATTACCGCCGGGTTCGTGTAAATAA

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_031924	XLOC_031924-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000329_pilon	genome	sc0000329_pilon:131985..147579 +

Properties


Property Name	Value
Aaloc	1120-1218:15497
Aaloc	1060-1119:15168
Aaloc	898-1056:13250
Aaloc	793-897:9719
Aaloc	652-792:8943
Aaloc	553-648:8258
Aaloc	499-552:7476
Aaloc	403-498:6859
Aaloc	343-402:6242
Aaloc	208-339:4435
Aaloc	103-207:100
Aaloc	1-99:1

You are here

XLOC_031924 (mRNA) -