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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000253_pilon:390076..393942+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031828 ID=XLOC_031828|Name=XLOC_031828|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3867bp|location=Sequence derived from alignment at sc0000253_pilon:390076..393942+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGATCATTTGTATCTCGTTTCTGTCGAATCGTGTCCAAGCGACTAATAC
AACGTCCAACGCAACGTCATCTGGAACAGGCCCAGGTATAAATCCAATAA
ATCATCAATTTTCGATTGTTTACCATAGTTAAAAATTTAACGAACTGAAA
ATGACGCGGGAAATAACGAGAGCTCAAGGTAGAAGAGTTTAGGCCTTTCC
GGACGatagaaatgtaaaaaaaaatcaaatgttttgagTCTTGCGTAAGC
GTCTTAGTGCGCACGGTGCCTTAAATAGACCTACCTTACTCGAAATTTCC
TGATGTTTCCAACGACACCATACTTATAATaatccaaaagttcccttaac
aGTCGAAAAACGCTTCAATTGCAGAGATCcactttttttggtgattttgg
ttgGTGCTTTTGATGTTTAGGGAACTTCAGGATTGTTATGGGAAAGTGCA
GTAGCTGAAAAAGCTCTTGAGAAGACTTTCGAGATATTCTTGTTTGAAGT
ATGGTCACTAGTATGTCCCACTTCTTGGCACGTGCGCTCGGAAAGAATCA
AGTCAAAAACACATTAGtttattggcaaaaatttcattaattaaGTCAAT
GAATTTTGAGAACTTGATGAAATTATTTAATCATAATTGTGTTTTAACAT
TTTCCCAACAATCggtaattttgtgattttaatCCATTCTTTAACTTCAG
ACTTCATTAGCGATTGCGACACCGAAAAGATGACTATCTATATTCGTAAA
GATAAAATTTCAATCCCTGAAAGTGATCTTTCTCAATACAACATTTCTTG
GAATGATCCTAATTGCGGACCAAGTGAAAGTACCAATGATACACATTTGG
TTTTGGTGGCCGGTTATTCGTCTTGTGGTACCCAAGCTGTTACCGAGGGT
GATCACGTGATATTCAAGAATAAGGTAGGGCTGATTTTACAAATAAAGGA
TAGCAACCATTATGTTTTTTGAATGATTGACAGCCGTGAAATCTTTCGAT
AAGCTTCAAAAAATGTGTTGTTTCTTTTCTCATATTCGAATCTAATTCAG
TCTTTCTGGTATTTTGACCAGGGGAAGATTCTAAATATTTCCTAAAGATT
ACTTTCTAAGTGtttttttGTCGATTTGTCACAGCTTGTCTGTTACCAAA
TGAATGCCAAATGAACGTCAAGTGAATCTCaacttcaaaatgtttttata
ttccCCAGGTATCCATTAATTTGAACAAAACAAACTCGTACAAAAACGAT
CTATTGGAGAGGATCGACACGTTCGCCACATATTCCGTTGAATGCAATGT
TCCGCAAGGAGTGAATGTGACACAAGAAAATGGAGTCAATATCACCAAAG
CTGATTTGATTGAAGGAGTATCAAGTATGTATAGCGTCAATATCGCAGCT
CTGGAAACTTTCCTCGCAGGCAGCGGGGATGAAAATTCTTaatgaaatcc
caatggggataaaaattctatttccaAGCTTGAAATATGCAAtgaggatg
gttttggaataaaatttttaaacatttaatttcgaatGGGGACGAAATCA
AAGCCAATTTCTGAGTGGGGTTGAACTTTGTATGGTATTCTCCCACCGAA
GACGAAATTTTGGcctaattttccagtggggctaagGTCCCAACGTGTCT
GTGACAAAGTAGAGTGTTTATGTATAGGAAACCAGCCGATCAATGGAATA
CTTGGATTAACATAGTATTGGATTGACAGAGACGCGCAGCGTTGACCCTT
TTTTAACAGCCCTTTTGTAGCCTGGGAGCACGTTCTAGCAAGAATGTCTC
GTTGTAAAATCTAACGTTTTCGATATTTAGCTTTTATGAGGTCCgtaatg
aaaatttaaattaaagcaAGATTTTTTATTAGCCTCATATTTGAACCCTT
ATAGGTTCAACCGATCAATTCACTGTCTCGATGAATCTCCATAGCGACTC
AGAATTCGCCGGAAGTCTCGGTTATCCTGCAGTTATTGATACATTAGGAC
GTTTCAATTTGGAACTTGAGATCGACACTGTTGCAAATTTATACATCATT
CCACGAAATTGCTATGGTACTTCAACTTCGAATCGAGATGATGCCATTCG
AGAAGCCTTGGTCACTGACGGGTAATGCAACGGCTTTGTTCTTTTCTAGA
ATTGGTGATTGTTATGACTTTGTATTCCTAGATGGTCGTATATTCACTGT
ACTGtattttcgtttattttcgTTACCCTGTCCACGATAGATATCCTGGG
AAATTAACTTCAAAGTTTGTTTTATTGAATTTAGCGTATTTTAAATTTGT
CACTACTGTTACAAAACCGGGGTGTTTCCGTACAAAAACATTTCATGTAT
GTTATGAACCATTGAGCTGATGAAGTGATTGGGTTGCTTCGGGGTTGCTT
TTAATTCCCGAATGAAAATTCATTTATGTCTGATAATACCCCTTGACTGA
ACAGTTGGATATCGCCGTTGCTAAAGGTGCTAGGGTCTTCATTcgcttta
tttaatttttccttACTATTTAAATTGCTTTTCAGATGTCCCAATCAAGA
CCACGTTTTCAAAGTAGAAACCAAAGCTGACGATGGCAAGAAATTCCAAT
TTTCACTCAATGTTTTCCGATTCAAAAACTCAAATGGTATGGTGTACATT
CATTGTTCTGCCCACGTATGTTTGACAGGTAGCAACGACACCAACTGTCA
ATTTGGTTGTCAGGGAAACACCAGACGACGAAGACGTTCAGTGGAGGATA
ATGCCTTGACACAACTTGATTTAACCAAAGATTATGACATTCGAACTGGG
TTGATTATTGTCACCGAAAGTTCCAGAAGTAAGTTGGAATATTGAAAGTG
CTGGATACTGTAAAACCAAATTAACCAAATGATATAAGTGCAATTAACAC
CTCGCTAAGAAACCTTTGAATTCTCCTTAAATCAATTAAATTCAATCAAA
GTTTGGGTTCAAGTCACCTGCttaatagtagggggccaagccttgggtcc
cgtgacatcttttctaagACCgaaccatttttagtctattccaaagaaca
gtatattacaagatatttttgagagggaggacgtggattaggcccgggaa
aactttttatgaccaaaatagtgacgccataggcaaaactgcaagggaaa
atcggggtagagaaatagctgattttcaaaagtcaaaataaacgaaaatg
atttgTACCATCTGATAAAGCAtgaactctctgactaaaacacacaaagg
aaTACAGCCGCtataagaccaactaactgtcagctctactgtgatttgac
gtcaaatctcgTCTTGATCGTATACTGACGAAAGtatgttttttaacttt
aaatggctgtatttctttgtgtgttttagtcagagtcTTCTGGTCTTATT
TCTGGGCAAAAAGTGAAGTATTGTTCTTGTAAAGAATATTTCATGAATGG
TGGGTTGCTAACTTGCTAAAAGGAGATATTCGTATCTTATAGTAAGCCTT
GgatcccgtgacatcttttctggGGAAAAAGCCAAGCCTCGTAAAAAATT
ATTCTGTTTCTTGTAAACAAAGTCTTATAAGTAAAACTCtgaattttcat
tcttttggTAAGTGAATCATTAATCATGAAAGtgttccaaattttttgaa
atctgattTTCATCTTCTAGATAACGATTCATCTCAACAAGACACCAAAG
AATCGCAATCCAGCGACAATGATCAATTCTTTCAAACCACGACCAATATC
ATTCTCATTGCACTCATCTCGGTGATGTTTATTTTCGTTTGTTCTGTCAT
GGTGATTTTTTGTGTTCGTCGCCATCGAAGTGATTCAAGAAAGGATGTAA
CAATGGAAATGCGATGA Coding sequence (CDS) from alignment at sc0000253_pilon:390076..393942+ >XLOC_031828 ID=XLOC_031828|Name=XLOC_031828|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2364bp|location=Sequence derived from alignment at sc0000253_pilon:390076..393942+ (Clytia hemisphaerica_ch_hm2_pilon)
TCGATCATTTGTATCTCGTTTCTGTCGAATCGTGTCCAAGCGACTAATAC
AACGTCCAACGCAACGTCATCTGGAACAGGCCCAGTCGATCATTTGTATC
TCGTTTCTGTCGAATCGTGTCCAAGCGACTAATACAACGTCCAACGCAAC
GTCATCTGGAACAGGCCCAGACTTCATTAGCGATTGCGACACCGAAAAGA
TGACTATCTATATTCGTAAAGATAAAATTTCAATCCCTGAAAGTGATCTT
TCTCAATACAACATTTCTTGGAATGATCCTAATTGCGGACCAAGTGAAAG
TACCAATGATACACATTTGGTTTTGGTGGCCGGTTATTCGTCTTGTGGTA
CCCAAGCTGTTACCGAGGGTGATCACGTGATATTCAAGAATAAGACTTCA
TTAGCGATTGCGACACCGAAAAGATGACTATCTATATTCGTAAAGATAAA
ATTTCAATCCCTGAAAGTGATCTTTCTCAATACAACATTTCTTGGAATGA
TCCTAATTGCGGACCAAGTGAAAGTACCAATGATACACATTTGGTTTTGG
TGGCCGGTTATTCGTCTTGTGGTACCCAAGCTGTTACCGAGGGTGATCAC
GTGATATTCAAGAATAAGGTATCCATTAATTTGAACAAAACAAACTCGTA
CAAAAACGATCTATTGGAGAGGATCGACACGTTCGCCACATATTCCGTTG
AATGCAATGTTCCGCAAGGAGTGAATGTGACACAAGAAAATGGAGTCAAT
ATCACCAAAGCTGATTTGATTGAAGGAGTATCAAGTATCCATTAATTTGA
ACAAAACAAACTCGTACAAAAACGATCTATTGGAGAGGATCGACACGTTC
GCCACATATTCCGTTGAATGCAATGTTCCGCAAGGAGTGAATGTGACACA
AGAAAATGGAGTCAATATCACCAAAGCTGATTTGATTGAAGGAGTATCAA
GTTCAACCGATCAATTCACTGTCTCGATGAATCTCCATAGCGACTCAGAA
TTCGCCGGAAGTCTCGGTTATCCTGCAGTTATTGATACATTAGGACGTTT
CAATTTGGAACTTGAGATCGACACTGTTGCAAATTTATACATCATTCCAC
GAAATTGCTATGGTACTTCAACTTCGAATCGAGATGATGCCATTCGAGAA
GCCTTGGTCACTGACGGGTTCAACCGATCAATTCACTGTCTCGATGAATC
TCCATAGCGACTCAGAATTCGCCGGAAGTCTCGGTTATCCTGCAGTTATT
GATACATTAGGACGTTTCAATTTGGAACTTGAGATCGACACTGTTGCAAA
TTTATACATCATTCCACGAAATTGCTATGGTACTTCAACTTCGAATCGAG
ATGATGCCATTCGAGAAGCCTTGGTCACTGACGGATGTCCCAATCAAGAC
CACGTTTTCAAAGTAGAAACCAAAGCTGACGATGGCAAGAAATTCCAATT
TTCACTCAATGTTTTCCGATTCAAAAACTCAAATGGTATGGTGTACATTC
ATTGTTCTGCCCACGTATGTTTGACAGGTAGCAACGACACCAACTGTCAA
TTTGGTTGTCAGGGAAACACCAGACGACGAAGACGTTCAGTGGAGGATAA
TGCCTTGACACAACTTGATTTAACCAAAGATTATGACATTCGAACTGGGT
TGATTATTGTCACCGAAAGTTCCAGAAATGTCCCAATCAAGACCACGTTT
TCAAAGTAGAAACCAAAGCTGACGATGGCAAGAAATTCCAATTTTCACTC
AATGTTTTCCGATTCAAAAACTCAAATGGTATGGTGTACATTCATTGTTC
TGCCCACGTATGTTTGACAGGTAGCAACGACACCAACTGTCAATTTGGTT
GTCAGGGAAACACCAGACGACGAAGACGTTCAGTGGAGGATAATGCCTTG
ACACAACTTGATTTAACCAAAGATTATGACATTCGAACTGGGTTGATTAT
TGTCACCGAAAGTTCCAGAAATAACGATTCATCTCAACAAGACACCAAAG
AATCGCAATCCAGCGACAATGATCAATTCTTTCAAACCACGACCAATATC
ATTCTCATTGCACTCATCTCGGTGATGTTTATTTTCGTTTGTTCTGTCAT
GGTGATTTTTTGTGTTCGTCGCCATCGAAGTGATTCAAGAAAGGATGTAA
CAATGGAAATGCGATGAATAACGATTCATCTCAACAAGACACCAAAGAAT
CGCAATCCAGCGACAATGATCAATTCTTTCAAACCACGACCAATATCATT
CTCATTGCACTCATCTCGGTGATGTTTATTTTCGTTTGTTCTGTCATGGT
GATTTTTTGTGTTCGTCGCCATCGAAGTGATTCAAGAAAGGATGTAACAA
TGGAAATGCGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000253_pilon | genome | sc0000253_pilon:390076..393942 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 988-1182:3673 |
| Aaloc | 694-984:2537 |
| Aaloc | 478-690:1907 |
| Aaloc | 310-474:1209 |
| Aaloc | 88-309:703 |
| Aaloc | 1-84:1 |
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