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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000057_pilon:1319176..1322113- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031731 ID=XLOC_031731|Name=XLOC_031731|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2938bp|location=Sequence derived from alignment at sc0000057_pilon:1319176..1322113- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGTTTTACACCACAAGAAATGGAATTTCTACAATCACATGGCAA
TGAGGTTTTACTAATTTTGTCTTTATTTTTCTAAACTTTTTTAAATCGTT
TTTCTTTGAATTGATGTCCCTATTTGCAACAAACCAAAATGATAAGAACT
ATTGATTTTTTAATTGTGATTTGACAAATTTGATTTTTTATACAGCATTG
CATCCTGATTAGTGTTTTCAATATTTTCTCTCTTCCATGTTCATTCAAGG
TTTGTCGGAGTACATGGCTTGCATTATGGGAGTCAAGTGCCGCACCTGAA
CCAGATTCTCGTGAAGAACAAAAAGTGAAAGATTTCCTTGGGAAAAAATA
TGAAAGGAAAATGTGGTACAGCAGTAAACCAAAGGCAAAAGCACAAGCAG
CAGAACCTGAAGCAAAACCGTTGAAAACATTGTTGGGTGAAAATTCCCCT
CAAGTTATTGTAGGCTCTAAACAAGAACAAAAGTCTGTAAGTAAAACAAT
TGAGTTTTGAGCTGAGTTGTTGTTTTTAAAAATTCTGAGTATAAAATTCC
ATAAAGTTTAATTCAGCATGAAAAGTTATCCACAATAATAATAAAGTGAT
TATTTCATAATAATGAAATTAATTATCAAATATCATCTATACCAATACTG
AAATATTCCAGCATTCAATCATTTCTACTTATAGGCATCTATAAAATTAC
CACAATCTGCTGCACCTACCCCTCAACAACCTGTGTTACACCAACCTGAG
AAGAAATCTAATTTCGACCTCCTTGGTGACCTGAGTGGTGACCCTTTTGC
TTCATCTGCTCCACAACCCACAGCAAGTAGTACGTAATGAAATTCCTTTT
TAGAAACCTGTAAACTTTGGTTCTTTAAATGCATTAATTTTGATTCTTTC
ATATTTTGTGGAGTCTTATCCATTGATTTAAATTGTTTGAAGAAAATCAA
AAGTCTAAATTTTCAATTTATCAATAAAAACCAACAAATAAAATGTTGAA
TATTTTCAGACTCTGCAGATGCTTTTGGAGTGTTTGCACAGCCACCACCA
GCTCAAAACCAACAAGCACAACAAGCGCCACTTTTTGATGCTTTCGGTAC
CTCTTCTACAGCTGCACCAACAACAAGTCAACCGACAGCAAACGCTTCTT
TTGATTTCTTTGCTTCTTCCGCTGGACCAGTATCGACAGCTTCCTCTTCT
GCTACTGATTTCTTTGCCATGTCTTCGAATACAAGTCAACAACCAGCAGC
ATCCTCGTCTGCATTTGGAGTGACTTCTGATGCAGGTAATCTCATCGAAT
GCCAGTAGTCTTTGAAATGGTAACAATGAACAATTTTGAAAATAATTGAT
TACAATCTCGTGCTCAATTAATTGTTTATAGCAGAAGTTCCCCTGCACAA
GTGCACATATTGTTTTAGACCCCCTAAAAGATACATTATCTTTCTTGATA
ATAATAATATTGATACTACTATTTTTTCATTTTGTAAGGTCTTTCAGTTG
GAAACAACAGCGGTGGAGATAAATATGCTGCATTCGCTGATCTAGGTACA
TCCTCCACATCAATATTCGAGAGTCAATCCTCCTCAATATTTGGTAGCAG
TAGTTTTGGATCCGCTCCAGTATCTTCCAGTACACAGTCAATTTTTAGCA
ACAATAACCCTATGAACAATACACAACAACAACAATCAAGTAACAATATA
TTTGGAGCACAACCGACACAACAACCTTTTCAACAACAAGGACAAATGTC
AAATTTTTCGCAACCGCAGGTGCCTCAACAGGCACAACAGAATCCGTTTA
TGACTTCGAATAATGCTCCTCAACAGCCAGCCCAACCACAAAAACCATTG
AATCCGTTCCAAAATTTCTCGGCATCTGGCGGAAGCACAATGTCACAAGC
AGCACAGCTCGATAATTTTGGTTCCAGCATGGTGAACAATCAGAACAACT
CTTGGGGCACAACCGCCTCTAGTGCAAATAGCCAATCTTTCTCTAGTAAC
AATATGTTTTCAACTCAATTTAATGCTCAGACATCTAATACTGGGTTCAG
TATGCAAGCAAACCAAAATGCATCAACACAGCCTGTTTATTCCAATAACA
CAAATTACACTCAACCGCAACAACAACCCCAAACACAACAACAACAGAAC
TTTGGTGGTAATATTTTCCAACAACAACAGCAGCAGCAACCGATCAGTCA
AAATAACATGTTTGGAAATTCACAACAAAATGCACAACAAGCTTTTAATG
CAGGACAACAGTCAAATGGCTTTTCTTCACAACAAAGTTTTGGCAATTTT
GGAGCACAACAACAGCAGTCTGCAGCACCTCAGAAACCATTTGGTGGGGT
GCAAATGCCAGGTTTTGGACAACAACCTTTTCCTCAACAGCCACAACAAC
AACAACCACAGCAACAAAATTTTGGAACCTGGGGCCAACAACAGCAGGTA
CTCATTTTTTGAATAGTTTTATCCAAGAAGTTCGACTCAAAGCCAGAAAA
TCCTTTAATTCCTTACGTATTTATTGACATGCTGACGTGACTTATTGTCC
ATTTAATTGAAATTGATTTTTACAATTTCGAGGTTCCATTTATACCACTG
TTTGTGGCAGAAAGTAAGCACAGGTATTATGTATTTTGAACTAATTAGAA
GATTCAACCAGTAGCATTTTCAAGGGGTGTCGGAAAATTTGTGTAGGAGA
GCGCAATTTTGTTACGAAGTTATTATCTTTTAATGTTATGAAAAGATAGT
TACTTTGTCATAAAAATCTGCTCTCCTACGCAAATTTTCCGACACCCCTG
AGAACCCTACTGTTCAACTAAAGCCAGACAATGACCACCCTAATGCCTTC
ATAATAAAGTTTCGTCACCATTCTTTTCCAGGCCATTCCACAACAACAAC
AGCCAGCAGTAAAATTATCCAATAACCCATTTATGTGA Coding sequence (CDS) from alignment at sc0000057_pilon:1319176..1322113- >XLOC_031731 ID=XLOC_031731|Name=XLOC_031731|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3456bp|location=Sequence derived from alignment at sc0000057_pilon:1319176..1322113- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAGTTTTACACCACAAGAAATGGAATTTCTACAATCACATGGCAA
TGAGATGGCAAGTTTTACACCACAAGAAATGGAATTTCTACAATCACATG
GCAATGAGGTTTGTCGGAGTACATGGCTTGCATTATGGGAGTCAAGTGCC
GCACCTGAACCAGATTCTCGTGAAGAACAAAAAGTGAAAGATTTCCTTGG
GAAAAAATATGAAAGGAAAATGTGGTACAGCAGTAAACCAAAGGCAAAAG
CACAAGCAGCAGAACCTGAAGCAAAACCGTTGAAAACATTGTTGGGTGAA
AATTCCCCTCAAGTTATTGTAGGCTCTAAACAAGAACAAAAGTCTGTTTG
TCGGAGTACATGGCTTGCATTATGGGAGTCAAGTGCCGCACCTGAACCAG
ATTCTCGTGAAGAACAAAAAGTGAAAGATTTCCTTGGGAAAAAATATGAA
AGGAAAATGTGGTACAGCAGTAAACCAAAGGCAAAAGCACAAGCAGCAGA
ACCTGAAGCAAAACCGTTGAAAACATTGTTGGGTGAAAATTCCCCTCAAG
TTATTGTAGGCTCTAAACAAGAACAAAAGTCTGCATCTATAAAATTACCA
CAATCTGCTGCACCTACCCCTCAACAACCTGTGTTACACCAACCTGAGAA
GAAATCTAATTTCGACCTCCTTGGTGACCTGAGTGGTGACCCTTTTGCTT
CATCTGCTCCACAACCCACAGCAAGTAGCATCTATAAAATTACCACAATC
TGCTGCACCTACCCCTCAACAACCTGTGTTACACCAACCTGAGAAGAAAT
CTAATTTCGACCTCCTTGGTGACCTGAGTGGTGACCCTTTTGCTTCATCT
GCTCCACAACCCACAGCAAGTAACTCTGCAGATGCTTTTGGAGTGTTTGC
ACAGCCACCACCAGCTCAAAACCAACAAGCACAACAAGCGCCACTTTTTG
ATGCTTTCGGTACCTCTTCTACAGCTGCACCAACAACAAGTCAACCGACA
GCAAACGCTTCTTTTGATTTCTTTGCTTCTTCCGCTGGACCAGTATCGAC
AGCTTCCTCTTCTGCTACTGATTTCTTTGCCATGTCTTCGAATACAAGTC
AACAACCAGCAGCATCCTCGTCTGCATTTGGAGTGACTTCTGATGCAGAC
TCTGCAGATGCTTTTGGAGTGTTTGCACAGCCACCACCAGCTCAAAACCA
ACAAGCACAACAAGCGCCACTTTTTGATGCTTTCGGTACCTCTTCTACAG
CTGCACCAACAACAAGTCAACCGACAGCAAACGCTTCTTTTGATTTCTTT
GCTTCTTCCGCTGGACCAGTATCGACAGCTTCCTCTTCTGCTACTGATTT
CTTTGCCATGTCTTCGAATACAAGTCAACAACCAGCAGCATCCTCGTCTG
CATTTGGAGTGACTTCTGATGCAGGTCTTTCAGTTGGAAACAACAGCGGT
GGAGATAAATATGCTGCATTCGCTGATCTAGGTACATCCTCCACATCAAT
ATTCGAGAGTCAATCCTCCTCAATATTTGGTAGCAGTAGTTTTGGATCCG
CTCCAGTATCTTCCAGTACACAGTCAATTTTTAGCAACAATAACCCTATG
AACAATACACAACAACAACAATCAAGTAACAATATATTTGGAGCACAACC
GACACAACAACCTTTTCAACAACAAGGACAAATGTCAAATTTTTCGCAAC
CGCAGGTGCCTCAACAGGCACAACAGAATCCGTTTATGACTTCGAATAAT
GCTCCTCAACAGCCAGCCCAACCACAAAAACCATTGAATCCGTTCCAAAA
TTTCTCGGCATCTGGCGGAAGCACAATGTCACAAGCAGCACAGCTCGATA
ATTTTGGTTCCAGCATGGTGAACAATCAGAACAACTCTTGGGGCACAACC
GCCTCTAGTGCAAATAGCCAATCTTTCTCTAGTAACAATATGTTTTCAAC
TCAATTTAATGCTCAGACATCTAATACTGGGTTCAGTATGCAAGCAAACC
AAAATGCATCAACACAGCCTGTTTATTCCAATAACACAAATTACACTCAA
CCGCAACAACAACCCCAAACACAACAACAACAGAACTTTGGTGGTAATAT
TTTCCAACAACAACAGCAGCAGCAACCGATCAGTCAAAATAACATGTTTG
GAAATTCACAACAAAATGCACAACAAGCTTTTAATGCAGGACAACAGTCA
AATGGCTTTTCTTCACAACAAAGTTTTGGCAATTTTGGAGCACAACAACA
GCAGTCTGCAGCACCTCAGAAACCATTTGGTGGGGTGCAAATGCCAGGTT
TTGGACAACAACCTTTTCCTCAACAGCCACAACAACAACAACCACAGCAA
CAAAATTTTGGAACCTGGGGCCAACAACAGCAGGTCTTTCAGTTGGAAAC
AACAGCGGTGGAGATAAATATGCTGCATTCGCTGATCTAGGTACATCCTC
CACATCAATATTCGAGAGTCAATCCTCCTCAATATTTGGTAGCAGTAGTT
TTGGATCCGCTCCAGTATCTTCCAGTACACAGTCAATTTTTAGCAACAAT
AACCCTATGAACAATACACAACAACAACAATCAAGTAACAATATATTTGG
AGCACAACCGACACAACAACCTTTTCAACAACAAGGACAAATGTCAAATT
TTTCGCAACCGCAGGTGCCTCAACAGGCACAACAGAATCCGTTTATGACT
TCGAATAATGCTCCTCAACAGCCAGCCCAACCACAAAAACCATTGAATCC
GTTCCAAAATTTCTCGGCATCTGGCGGAAGCACAATGTCACAAGCAGCAC
AGCTCGATAATTTTGGTTCCAGCATGGTGAACAATCAGAACAACTCTTGG
GGCACAACCGCCTCTAGTGCAAATAGCCAATCTTTCTCTAGTAACAATAT
GTTTTCAACTCAATTTAATGCTCAGACATCTAATACTGGGTTCAGTATGC
AAGCAAACCAAAATGCATCAACACAGCCTGTTTATTCCAATAACACAAAT
TACACTCAACCGCAACAACAACCCCAAACACAACAACAACAGAACTTTGG
TGGTAATATTTTCCAACAACAACAGCAGCAGCAACCGATCAGTCAAAATA
ACATGTTTGGAAATTCACAACAAAATGCACAACAAGCTTTTAATGCAGGA
CAACAGTCAAATGGCTTTTCTTCACAACAAAGTTTTGGCAATTTTGGAGC
ACAACAACAGCAGTCTGCAGCACCTCAGAAACCATTTGGTGGGGTGCAAA
TGCCAGGTTTTGGACAACAACCTTTTCCTCAACAGCCACAACAACAACAA
CCACAGCAACAAAATTTTGGAACCTGGGGCCAACAACAGCAGGCCATTCC
ACAACAACAACAGCCAGCAGTAAAATTATCCAATAACCCATTTATGTGAG
CCATTCCACAACAACAACAGCCAGCAGTAAAATTATCCAATAACCCATTT
ATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000057_pilon | genome | sc0000057_pilon:1319176..1322113 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1672-1728:58 |
| Aaloc | 715-1671:1449 |
| Aaloc | 439-711:1928 |
| Aaloc | 292-435:2255 |
| Aaloc | 55-291:2690 |
| Aaloc | 1-54:2939 |
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