XLOC_031719 (mRNA) -

Overview


Name	XLOC_031719
Unique Name	XLOC_031719
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000057_pilon:879635..883270+
coding sequence from alignment at sc0000057_pilon:879635..883270+

mRNA from alignment at sc0000057_pilon:879635..883270+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_031719 ID=XLOC_031719|Name=XLOC_031719|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3636bp|location=Sequence derived from alignment at sc0000057_pilon:879635..883270+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGAAAACCGATCAAAGTTGTATCGATTCGATTCTGAGAACAAACA
ATGGAAGGAGAGAGGACTCGGTGTTCTCAAATTAACAAGAACGAAAGGAC
AGAATAGTTGTCGTGTGTTGATGAGAAGAGATCAGGTTCACAAGCTATGC
GCAAACCATGCGGTGGTTTCCACCATGGAAGTCAAACCGCTAAGTGAAAA
ATCAGACAAACAGTGGACCTGGTTCACACAAGCTGATTTCAGTGAAGAAG
AACAAAAACCCGAATATTTTTGCGCCAAATTCAAAACATCGGAAATCGCG
AAAGAATTCAAAGAGAAATTTGATGAATGTATTCAAATCGTTGGTGGTAA
AAGTGCAACTGTTTCAACACCAGTTCAAAAAGCGAAGCCACAAACCTCTC
CATCACCACAAGTCAAACCGACAACTCCTAATGCTACAAAAGCGACTCCT
GAAGTCTCCAAATCGCCCTCCTTCTCTTTCCAAACAAATGGTCCATCAAA
CGCGTTCTCAAACATGAACGGCTTCTCTTTTACATCACCAAATGGTAACC
AAGCAACCAGCGCGCCTGCACCAGCGTTCTCATTAGGACACAAAGCTACC
GAAGAAGCTAAACCAACAGCTCCTACatcgaatattttttcaaaattcgc
aGCCAAAAAAGGAGCTTGGGAGTGTGAAACATGTCTTGtagaaaacaaag
aagaagtACCACAGTGTCTTTCTTGTGAAACCGCCAATCCGAACGCCCCT
AAGACAGATACAAAGCCTGTCTCTACTACGGGAGGCTTCTCTTTCGGCGC
CCAGCCTTCTTCAACAACGGCCTCCTCAGGATTTTCCTTCGGTAACTCAG
GAAGCAATCAGCAACAAAGTTCCGGTTTTTCATTTGGAGGCACCAACACA
ACAACCAACCAACAAACTGCTGGATTTCCGTTCGGTAACACTTCAACCAG
CAGTCAACCTGCGAGTGGATTTTCTTTCGGATCTAAGACGAACGATTCTC
AAAGCTCTGGTTTCTCTTTTGGTGGAGCATCTAAAGCTGATCCTGAACAA
TCATCTGGATTTTCTTTCGGTAAAGTATCCTCAACAACTGAAAATACAGA
ACAGAAACCAACGTTCAGTTTCGCCAAGACATCAGACAACCCTTTTTCAC
AATTCACTCCAGGAGAAGGTTCTTGGGAATGTGATGCTTGTCTCATTGAA
AACACTAAAGAGGTGACAGAATGCGAATCATGTGAAACTCCCAAACCGAC
TACAACACCAAAGGAAACCCCAAAACCAAAACTATTTCCAACGCAACAAC
CTCCTGCCCAACCGACGTTCAGTTTTGCCAAAGGAGGAGATAACGTTTTT
GGAAAACTTGCTCCAGCTGCTGGATCCTGGGAATGTGATACTTGTATGGT
CTCCAATAATGAAGAAGCTATGGTTTGTGAATCCTGTGAAACACCTAACC
CTAATGCTCCAAAGGGTGCTACTGCAAGTTCTTCAAGCTCGATGACAAGC
GCTGGCGGTACCTTCAAATTTCCTTCTTCCGATTCTGGTTTTGCAAGCGC
TTTCTCATTTGGAGGAAAACCTGCAGATTCCAGCCAATCAAGTGGTTTTA
AGTTTGGGGAAAAACCTGCAGATTCTGCCCAATCGAGTGGTTTTAAGTTT
GGAGGAAAACCCGCAGATTCTACCCAATCAAGTGGTTTTAAGTTTGGAGA
AAAACCTGCAGATTCTGCCCAATCGAGTGGTTTTAAGTTTGGAGAAAAAC
CTGCAGATTCCAATCAATCAAGTGGTTTTAAGTTTGGAGAAAAACCTGTA
GAATCTAACCAATCAAGTGATTTTAAGTTTGGAGGAAAACCCGCAGATGC
CACTCAATCAAGTGGTTTCTCATTCGGAGGAAAACCTGTAGATTCCAGTC
AATCAAGTGGTTTTAAGTTTGGAGAAAAACCCGGAGATTCCAATCAATCA
AGTGGCTTCTCTTTTGGAGGAAAAGCCGTAGAATCTAGCCAATCAAGTGG
TTTCTCGTTTGGGGGAAAACCCGCAGATTCCAACCAATCAAGTGGCTTTT
CTTTTGGAGGAAAACCCGCAGATTCCAATCAATCAAGTGATTTTTCATTC
GGAACACCAACATCATCTGGCGAAGCTTTGAATGGAACACCAAACCCTGG
ATTTACTTTTGGTCAACAACCAACATCCACTGGATTTAAGTTCGGTCAAA
ACACAACTGATGACCCCGTTCAACAAGATCAAGTCTCGTCATCAACCACT
CCTAACAAAAACGATAATTTCAAATCGAGTTTGAAAGTAGACGTTCGTCC
GAAAACCACACCTCCTGCTGAGGATAAATTCAAAGCAGATCCGGACACCT
GGGAGTGTGTATGTTTGATAAAAAACGCCGGACACCGAGACAAATGTCGA
GAATGCGGACATCCGCGTCAAAAAACACCGGTCGTTAAATTGAACCCCGA
AGAATTCTCTCAACCCATTAATTTCAATGCAGCTGCGGCTTCTAGAGGAA
CGGAAAACAAACTTTTCCCCTTTTCAGTTGCTGTACCATCCAATACACAA
TCTCCTTCAACTTTCAGCTGGGGACAAACGGCCACACCTAAAGCACAAAC
AACACCCAAAAAAGATGTCTTCCAAGCTCCAACTGGTTTCCCGTCTACCT
TCACAGCTCAAACACCAAAAAATGACGGATTTGCTGTCCCAAAAGGTCTA
CCAACTCCAACTACAGACACAAAGAAATCTAATTCATGGATACCCACTGG
TCTGAATACTGGAAATCTCTTCTCTTTCGGCGCAAACCCAAAACCATCTT
TATCGAATGCCAGTAGTGTTGACGATCTTTCAACCCAAGACACATTCTCA
GGCGTAACCTCTGCTTTCGCTAACGCTGAATTCTCTTTTACTTTTGAACA
AACAAAAACCGCTAAAACACCATCACCGACAAAATCCAAATGGAAAGTCC
CAACTCCCCCTACTTCTTCAGAGTACGACCCAGAAGGAGAGGCTAACGTC
GAGTTCTCCCCCTTCGTGTCTCTATCGCAACTGAAAACACAAAGCACGGG
GGAAGAGAACGAATCATGTTTATTCGCTAACCGATGTAAACTGTTCCGCT
ACGACGCGAATCAATGGAAAGAGCGCGGTGTGGGAGAGCTGAAAATCTTA
TTGAACAAGAAGACTGGTAACCACCGTTTGATCATGAGGCGTGACCAGAT
TCATAAATTATGCGCTAATCATAATATTAGGCCTGGAACCGACTTGAATC
CAATGAAAGGGTCCAATAAAGCTTATATATGGCAATCACTCGGCGATATT
TCTGATGACGAACCAAAAGATATGATGTTCGCCGCTCGTTTCAAGGATGA
AGAAATTGCGAGTCAATTCGCTCAGGTCTTCAAGAAAGCAGCGGACGCAC
AGGAAAGTGTAGCGGCCGCAAGTGAGTCGAGCGTGATCGTGGTTTCCGAC
GGAGAAGATGAGGATAGTAACCCGGCTTTACGGGAGCACGTGGATGACGA
CGAACTTACGTTAACGTACGAAGCTAAACCAACGCATGATTTACGTGAGA
AAGCACGCATGCTTTTGTTGCCAATATCATTCTACAACCAGCCCACCGTT
CAACTACGACAACGTCCAACTAAGACAGAAGCTTTG

Coding sequence (CDS) from alignment at sc0000057_pilon:879635..883270+

>XLOC_031719 ID=XLOC_031719|Name=XLOC_031719|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6642bp|location=Sequence derived from alignment at sc0000057_pilon:879635..883270+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGAAAACCGATCAAAGTTGTATCGATTCGATTCTGAGAACAAACA
ATGGAAGGAGAGAGGACTCGGTGTTCTCAAATTAACAAGAACGAAAGGAC
AGAATAGTTGTCGTGTGTTGATGAGAAGAGATCAGGTTCACAAGCTATGC
GCAAACCATGCGGTGGTTTCCACCATGGAAGTCAAACCGCTAAGTGAAAA
ATCAGACAAACAGTGGACCTGGTTCACACAAGCTGATTTCAGTGAAGAAG
AACAAAAACCCGAATATTTTTGCGCCAAATTCAAAACATCGGAAATCGCG
AAAGAATTCAAAGAGAAATTTGATGAATGTATTCAAATCGTTGGTGGTAA
AAGTGCAACTGTTTCAACACCAGTTCAAAAAGCGAAGCCACAAACCTCTC
CATCACCACAAGTCAAACCGACAACTCCTAATGCTACAAAAGCGACTCCT
GAAGTCTCCAAATCGCCCTCCTTCTCTTTCCAAACAAATGGTCCATCAAA
CGCGTTCTCAAACATGAACGGCTTCTCTTTTACATCACCAAATGGTAACC
AAGCAACCAGCGCGCCTGCACCAGCGTTCTCATTAGGACACAAAGCTACC
GAAGAAGCTAAACCAACAGCTCCTACatcgaatattttttcaaaattcgc
aGCCAAAAAAGGAGCTTGGGAGTGTGAAACATGTCTTGtagaaaacaaag
aagaagtACCACAGTGTCTTTCTTGTGAAACCGCCAATCCGAACGCCCCT
AAGACAGATACAAAGCCTGTCTCTACTACGGGAGGCTTCTCTTTCGGCGC
CCAGCCTTCTTCAACAACGGCCTCCTCAGGATTTTCCTTCGGTAACTCAG
GAAGCAATCAGCAACAAAGTTCCGGTTTTTCATTTGGAGGCACCAACACA
ACAACCAACCAACAAACTGCTGGATTTCCGTTCGGTAACACTTCAACCAG
CAGTCAACCTGCGAGTGGATTTTCTTTCGGATCTAAGACGAACGATTCTC
AAAGCTCTGGTTTCTCTTTTGGTGGAGCATCTAAAGCTGATCCTGAACAA
TCATCTGGATTTTCTTTCGGTAAAGTATCCTCAACAACTGAAAATACAGA
ACAGAAACCAACGTTCAGTTTCGCCAAGACATCAGACAACCCTTTTTCAC
AATTCACTCCAGGAGAAGGTTCTTGGGAATGTGATGCTTGTCTCATTGAA
AACACTAAAGAGGTGACAGAATGCGAATCATGTGAAACTCCCAAACCGAC
TACAACACCAAAGGAAACCCCAAAACCAAAACTATTTCCAACGCAACAAC
CTCCTGCCCAACCGACGTTCAGTTTTGCCAAAGGAGGAGATAACGTTTTT
GGAAAACTTGCTCCAGCTGCTGGATCCTGGGAATGTGATACTTGTATGGT
CTCCAATAATGAAGAAGCTATGGTTTGTGAATCCTGTGAAACACCTAACC
CTAATGCTCCAAAGGGTGCTACTGCAAGTTCTTCAAGCTCGATGACAAGC
GCTGGCGGTACCTTCAAATTTCCTTCTTCCGATTCTGGTTTTGCAAGCGC
TTTCTCATTTGGAGGAAAACCTGCAGATTCCAGCCAATCAAGTGGTTTTA
AGTTTGGGGAAAAACCTGCAGATTCTGCCCAATCGAGTGGTTTTAAGTTT
GGAGGAAAACCCGCAGATTCTACCCAATCAAATGTTTGAAAACCGATCAA
AGTTGTATCGATTCGATTCTGAGAACAAACAATGGAAGGAGAGAGGACTC
GGTGTTCTCAAATTAACAAGAACGAAAGGACAGAATAGTTGTCGTGTGTT
GATGAGAAGAGATCAGGTTCACAAGCTATGCGCAAACCATGCGGTGGTTT
CCACCATGGAAGTCAAACCGCTAAGTGAAAAATCAGACAAACAGTGGACC
TGGTTCACACAAGCTGATTTCAGTGAAGAAGAACAAAAACCCGAATATTT
TTGCGCCAAATTCAAAACATCGGAAATCGCGAAAGAATTCAAAGAGAAAT
TTGATGAATGTATTCAAATCGTTGGTGGTAAAAGTGCAACTGTTTCAACA
CCAGTTCAAAAAGCGAAGCCACAAACCTCTCCATCACCACAAGTCAAACC
GACAACTCCTAATGCTACAAAAGCGACTCCTGAAGTCTCCAAATCGCCCT
CCTTCTCTTTCCAAACAAATGGTCCATCAAACGCGTTCTCAAACATGAAC
GGCTTCTCTTTTACATCACCAAATGGTAACCAAGCAACCAGCGCGCCTGC
ACCAGCGTTCTCATTAGGACACAAAGCTACCGAAGAAGCTAAACCAACAG
CTCCTACatcgaatattttttcaaaattcgcaGCCAAAAAAGGAGCTTGG
GAGTGTGAAACATGTCTTGtagaaaacaaagaagaagtACCACAGTGTCT
TTCTTGTGAAACCGCCAATCCGAACGCCCCTAAGACAGATACAAAGCCTG
TCTCTACTACGGGAGGCTTCTCTTTCGGCGCCCAGCCTTCTTCAACAACG
GCCTCCTCAGGATTTTCCTTCGGTAACTCAGGAAGCAATCAGCAACAAAG
TTCCGGTTTTTCATTTGGAGGCACCAACACAACAACCAACCAACAAACTG
CTGGATTTCCGTTCGGTAACACTTCAACCAGCAGTCAACCTGCGAGTGGA
TTTTCTTTCGGATCTAAGACGAACGATTCTCAAAGCTCTGGTTTCTCTTT
TGGTGGAGCATCTAAAGCTGATCCTGAACAATCATCTGGATTTTCTTTCG
GTAAAGTATCCTCAACAACTGAAAATACAGAACAGAAACCAACGTTCAGT
TTCGCCAAGACATCAGACAACCCTTTTTCACAATTCACTCCAGGAGAAGG
TTCTTGGGAATGTGATGCTTGTCTCATTGAAAACACTAAAGAGGTGACAG
AATGCGAATCATGTGAAACTCCCAAACCGACTACAACACCAAAGGAAACC
CCAAAACCAAAACTATTTCCAACGCAACAACCTCCTGCCCAACCGACGTT
CAGTTTTGCCAAAGGAGGAGATAACGTTTTTGGAAAACTTGCTCCAGCTG
CTGGATCCTGGGAATGTGATACTTGTATGGTCTCCAATAATGAAGAAGCT
ATGGTTTGTGAATCCTGTGAAACACCTAACCCTAATGCTCCAAAGGGTGC
TACTGCAAGTTCTTCAAGCTCGATGACAAGCGCTGGCGGTACCTTCAAAT
TTCCTTCTTCCGATTCTGGTTTTGCAAGCGCTTTCTCATTTGGAGGAAAA
CCTGCAGATTCCAGCCAATCAAGTGGTTTTAAGTTTGGGGAAAAACCTGC
AGATTCTGCCCAATCGAGTGGTTTTAAGTTTGGAGGAAAACCCGCAGATT
CTACCCAATCAAGTGGTTTCTCGTTTGGGGGAAAACCCGCAGATTCCAAC
CAATCAAGTGGCTTTTCTTTTGGAGGAAAACCCGCAGATTCCAATCAATC
AAGTGATTTTTCATTCGGAACACCAACATCATCTGGCGAAGCTTTGAATG
GAACACCAAACCCTGGATTTACTTTTGGTCAACAACCAACATCCACTGGA
TTTAAGTTCGGTCAAAACACAACTGATGACCCCGTTCAACAAGATCAAGT
CTCGTCATCAACCACTCCTAACAAAAACGATAATTTCAAATCGAGTTTGA
AAGTAGACGTTCGTCCGAAAACCACACCTCCTGCTGAGGATAAATTCAAA
GCAGATCCGGACACCTGGGAGTGTGTATGTTTGATAAAAAACGCCGGACA
CCGAGACAAATGTCGAGAATGCGGACATCCGCGTCAAAAAACACCGGTCG
TTAAATTGAACCCCGAAGAATTCTCTCAACCCATTAATTTCAATGCAGCT
GCGGCTTCTAGAGGAACGGAAAACAAACTTTTCCCCTTTTCAGTTGCTGT
ACCATCCAATACACAATCTCCTTCAACTTTCAGCTGGGGACAAACGGCCA
CACCTAAAGCACAAACAACACCCAAAAAAGATGTCTTCCAAGCTCCAACT
GGTTTCCCGTCTACCTTCACAGCTCAAACACCAAAAAATGACGGATTTGC
TGTCCCAAAAGGTCTACCAACTCCAACTACAGACACAAAGAAATCTAATT
CATGGATACCCACTGGTCTGAATACTGGAAATCTCTTCTCTTTCGGCGCA
AACCCAAAACCATCTTTATCGAATGCCAGTAGTGTTGACGATCTTTCAAC
CCAAGACACATTCTCAGGCGTAACCTCTGCTTTCGCTAACGCTGAATTCT
CTTTTACTTTTGAACAAACAAAAACCGCTAAAACACCATCACCGACAAAA
TCCAAATGGAAAGTCCCAACTCCCCCTACTTCTTCAGAGTACGACCCAGA
AGGAGAGGCTAACGTCGAGTTCTCCCCCTTCGTGTCTCTATCGCAACTGA
AAACACAAAGCACGGGGGAAGAGAACGAATCATGTTTATTCGCTAACCGA
TGTAAACTGTTCCGCTACGACGCGAATCAATGGAAAGAGCGCGGTGTGGG
AGAGCTGAAAATCTTATTGAACAAGAAGACTGGTAACCACCGTTTGATCA
TGAGGCGTGACCAGATTCATAAATTATGCGCTAATCATAATATTAGGCCT
GGAACCGACTTGAATCCAATGAAAGGGTCCAATAAAGCTTATATATGGCA
ATCACTCGGCGATATTTCTGATGACGAACCAAAAGATATGATGTTCGCCG
CTCGTTTCAAGGATGAAGAAATTGCGAGTCAATTCGCTCAGGTCTTCAAG
AAAGCAGCGGACGCACAGGAAAGTGTAGCGGCCGCAAGTGAGTCGAGCGT
GATCGTGGTTTCCGACGGAGAAGATGAGGATAGTAACCCGGCTTTACGGG
AGCACGTGGATGACGACGAACTTACGTTAACGTACGAAGCTAAACCAACG
CATGATTTACGTGAGAAAGCACGCATGCTTTTGTTGCCAATATCATTCTA
CAACCAGCCCACCGTTCAACTACGACAACGTCCAACTAAGACAGAAGCTT
TGGTGGTTTCTCGTTTGGGGGAAAACCCGCAGATTCCAACCAATCAAGTG
GCTTTTCTTTTGGAGGAAAACCCGCAGATTCCAATCAATCAAGTGATTTT
TCATTCGGAACACCAACATCATCTGGCGAAGCTTTGAATGGAACACCAAA
CCCTGGATTTACTTTTGGTCAACAACCAACATCCACTGGATTTAAGTTCG
GTCAAAACACAACTGATGACCCCGTTCAACAAGATCAAGTCTCGTCATCA
ACCACTCCTAACAAAAACGATAATTTCAAATCGAGTTTGAAAGTAGACGT
TCGTCCGAAAACCACACCTCCTGCTGAGGATAAATTCAAAGCAGATCCGG
ACACCTGGGAGTGTGTATGTTTGATAAAAAACGCCGGACACCGAGACAAA
TGTCGAGAATGCGGACATCCGCGTCAAAAAACACCGGTCGTTAAATTGAA
CCCCGAAGAATTCTCTCAACCCATTAATTTCAATGCAGCTGCGGCTTCTA
GAGGAACGGAAAACAAACTTTTCCCCTTTTCAGTTGCTGTACCATCCAAT
ACACAATCTCCTTCAACTTTCAGCTGGGGACAAACGGCCACACCTAAAGC
ACAAACAACACCCAAAAAAGATGTCTTCCAAGCTCCAACTGGTTTCCCGT
CTACCTTCACAGCTCAAACACCAAAAAATGACGGATTTGCTGTCCCAAAA
GGTCTACCAACTCCAACTACAGACACAAAGAAATCTAATTCATGGATACC
CACTGGTCTGAATACTGGAAATCTCTTCTCTTTCGGCGCAAACCCAAAAC
CATCTTTATCGAATGCCAGTAGTGTTGACGATCTTTCAACCCAAGACACA
TTCTCAGGCGTAACCTCTGCTTTCGCTAACGCTGAATTCTCTTTTACTTT
TGAACAAACAAAAACCGCTAAAACACCATCACCGACAAAATCCAAATGGA
AAGTCCCAACTCCCCCTACTTCTTCAGAGTACGACCCAGAAGGAGAGGCT
AACGTCGAGTTCTCCCCCTTCGTGTCTCTATCGCAACTGAAAACACAAAG
CACGGGGGAAGAGAACGAATCATGTTTATTCGCTAACCGATGTAAACTGT
TCCGCTACGACGCGAATCAATGGAAAGAGCGCGGTGTGGGAGAGCTGAAA
ATCTTATTGAACAAGAAGACTGGTAACCACCGTTTGATCATGAGGCGTGA
CCAGATTCATAAATTATGCGCTAATCATAATATTAGGCCTGGAACCGACT
TGAATCCAATGAAAGGGTCCAATAAAGCTTATATATGGCAATCACTCGGC
GATATTTCTGATGACGAACCAAAAGATATGATGTTCGCCGCTCGTTTCAA
GGATGAAGAAATTGCGAGTCAATTCGCTCAGGTCTTCAAGAAAGCAGCGG
ACGCACAGGAAAGTGTAGCGGCCGCAAGTGAGTCGAGCGTGATCGTGGTT
TCCGACGGAGAAGATGAGGATAGTAACCCGGCTTTACGGGAGCACGTGGA
TGACGACGAACTTACGTTAACGTACGAAGCTAAACCAACGCATGATTTAC
GTGAGAAAGCACGCATGCTTTTGTTGCCAATATCATTCTACAACCAGCCC
ACCGTTCAACTACGACAACGTCCAACTAAGACAGAAGCTTTG

Gene-mRNA-Prot

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
XLOC_031719	XLOC_031719-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000057_pilon	genome	sc0000057_pilon:879635..883270 +

Properties


Property Name	Value
Aaloc	1891-3324:2203
Aaloc	1684-1887:1999
Aaloc	1-1680:1

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XLOC_031719 (mRNA) -