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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000057_pilon:1235559..1242097+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031667 ID=XLOC_031667|Name=XLOC_031667|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6539bp|location=Sequence derived from alignment at sc0000057_pilon:1235559..1242097+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACCTTAGTTCTAGTACTACTATTTACCACAGGTAAGTGAACTTA
AAACTACATATTTTTCCAGACCTTTCAATAATTATAAATCAACTGTTTTA
TACTTTCATTTTCTCATGAAACTAAAGtaaagtaaatcaaaactaGATAA
CACTCCCATTATGGGACCCATTTAATCACTGTTACGTTCAAAGGTTTATA
AGGAAACGCCACTGAGAAACCTTGATACTGTTATCTCCCCATAAATGTAC
GAGGAACAGTTCCTAGATAGCAAAATCTCCAGTTATCCATCccaatcttt
ttgttttcctACTTTCATCATATACAAATCCCAAGTAAACAACACTTCCC
AAATCCTGATAGCTCAAAACCTGGAGACTTAGTATTAGGGGTTTCTTGGT
TCccaataaaatttagctcctaTCTAAATcttgtaagaaaatttttttgt
ttgtgtcaTTGTGGCGGTTGTTAAAAATAAATGCAGCATCGGTTGAGAGA
AAAGATTTCTAGGTATCTGAAAATCGCACCAGAAAATCAACTCTATTGTG
TGTGTATATTTAAAATAACATTGTTCTCcctgttccagaaaaaaaccatt
acccCAGATTACCCCCCTGTGGACGACActgttttttagacttttttcac
TTGGGAATcctgagaaattttgaaaaaggttcCGGAAAATGCTGCATTTC
CATAATTATTTGGTCATATGTATTGGAAAATCCACAAAATTTGTACTAAT
TGCTTGTTAAGTATTTTTCATTAAGAATTCTTGAATCTTATGGCATGGAA
AgtctgaattttttcaaaagtaaattataACGGAAATCCATGACGTCCTC
AGGGGGTAACGGACAAAACTGGAACCGCCCATTTGTTGCGGAACGAACAA
TTtgaattttctggatttttaaCGGTTACCTAATTTCcatggaaaaaaat
ttatttataaggaaaaaaatagtttgacaacacaacatttttacaaatta
tcTCGATTATGACACAAACCTACACATTTCTGAAGTTCTTAATGAAAGCC
CGAACCAGATATATATATTCAGGAATGCCGAAAGTTTGGATAAACTGGGA
GGTTTTAGTCGTCAAGGGTCATTAACACAAGACTTTTTTATTGGCCCTTA
TTTcagctaaatttttcaaatagaagTCCAATGAAAGTTACATGAATCAT
GTCACAAACAGTCTAGCCAAGGTTCTAAGCTAATAGTATTTTAAGATATA
TACTTTActattagcttttctcaaaaaacTTTTGGTATTCCCaaggcaat
aaaaatatttggtttttgaaggcaaaaataataacatctgCTTTATTtcc
aaaagcaattcaaaatgacagatttttctctttgttttgaaaacattatc
TTATCAAACAATCAGAAACGATTATTGCTTGTCAAAATACTCCAAAtcca
tagtttgcagagggtaCGAACCCCCTAGGTTTATGTCATCCCCCttgttt
taccaaaattttgtttcaaaggAAGTGTGTATATACtacttaaaaatcaa
aacaaaaacagaagcagcgtttaaaaaaatcaaagcatCAGTTTTAAATA
CAGATTTGTTGCTGTTGATGGACTAGTTGTCCGAAATCTGGGCTCCGTTG
GGCTATGCCTCTCCCCAATGTGCATAGCTTAACAGTTCTCTCAAAGTTAG
CTGGTTGGTTGGAGATTGGACACTAGCTGTGTCTCAGTTCGTGGCAATTC
CATTGATTCGTAGAATTCAGGTACCGGATGGTGAACATTGAGCACGTCGC
TCCCCTTGTCTACTACAAACTAGTGCAATAGCAACGAACCGATAGCAcag
ttgggagagcaatcgcccggCAAGCGAAAGGTCGTGGGTTTAATCCCCAC
ttgattcgttacctttgagaaaactgggaagtgcATTAGTGCAGGTTCTG
GTAATTtcatgtgcttattttttttaaacaatgctGTTCCTATCGAAGAG
GGGGGCAAGTGTAACTTTTTCACAACAAAGAATCTTTGGTGGAGGAATAT
GAATCAGTATGAATCAAAGGCAGTCCAATGATaattaaccaatcaaatat
tatttatcagatttacTTTTCAGTTGAGAGTTTGAGGTTCTGTTGTATTT
GGCAATGGGATCTCTATTGCGTCcctcacatgactaaaggttcaatctca
aaataagtgtcttggaaaattggaaatcttgcaatcctgttctgcctttg
agattggcctttttgtcatatgaaaactcaactattcctctacatgaaaa
aagggcaatctcaatctcaatgGCCACCacgtaaaactttttttttaaac
tttcatgaggcaaatacttttttatttattggtttacggatccgccggcg
ttatttttgccaaaataaaaaaatggagattttaaaaacttttatttact
ttttctcctccgaccttcaaaaaagaagaaagaaataaaaaaacccttac
ttaaataggaaaacaaaagaaaagaagagaaagaaagaGGGGGTTAAATG
ATCTAACACAGCTGTGCCCTATGCTGCCAATGTAAAGATACtttgatcct
tcccttaatgTCAGGGAACTTCCCCATGGAATTTCCCTATCCACAAAAAC
TCCAAGAGTACATTTTTCCTTCATATGTGCTAAGAAGAAGAGTTGTTGAA
GAGAGACTTATTTAGATACTtagcaaatttcataaaattttatttcatta
tttcctccgatttctgattttaaaaaagaaaataaaaaaaattaaaacat
caattttatttttattttttttccatcctcctggcctcctgtccaaaact
tttcctcataatgtccgtaaaccagaaaataaaaaagtaattgcctaagg
tattaattttgagattaaaccTTAAGTCATGTGAGGGACGATTGGTAAAT
ATTGTTCAATTTGGTTTGATTGGTTCCATCGTTGGTTTCATAAAACTGTA
TAAGATTGTGAATTAATCAATTTTACAGTTTTTACCGGAATCTATAGGCA
TTTTTGGACATCATTGTCAACTCACTAAAACATGACTCTTTTGATGaaga
attttgttaaaaaatctcaaattattCTTTTATAACTCAAGATTTATAAT
TTATTCTTGCCAGAAAACTTGATAATTATCATGGAACTTTATGCCAATTC
AAGTCGATGTTTATTATTTTGAAGCCTGTTTAGTATTTTGTATGTTTTGC
CTTTGTTGGTGTAAGCTCAGAATTCTGCAGTGGTGTAACAAGGATGGTGT
AAAAGGGTCAATATGGTACCTGGAATCAAGAAGGATTCTCGACATCATAT
GCTaaaatttggttttcaaaagaagctCTTAAATTTAACCTCGAAAGGGT
ATTCATGATTATTATGCTCAAGATAGAAGGAGACTTGTAATTTAtctgtt
ttgatttaaaaattagaAAGACCAGCCTAAACAATAACTTTTTGTTCTTC
ATCATTGTGGATAATTTGGAGTCCATTTTGtcatattttgatattctttg
GATCAGATTGTTCAACTCAGGAAAAATGAGACCAAATCTGAACAGTTACT
AGCAAACTCATGTGTGGTGAATTGCTCAAGTCAAGGGACCACCCACTCAA
ATTCTTTATGGAGAACTTCAAGAGCATAGGAGTCGATTTGATAAAACTGT
TTTCTTAAGGACAAGGCAGTGATTTAATGTTGAAATCCATGTTGAAATCT
TCTCAgagaaatttaaagaaaatcttcaagGATTGTTGCTTTTGACATCT
AAAACAtttcttcttaaattttagCCTGCTTTGCAAGTGGTTCATCATCT
GTAGCAGCTCCCTCAATAGCTCCTTCAGTAGCTGGACCTTCATCAGTTGC
TACAGGATCCACAACAGCAATGCCTGCTGACCCAACTTCAATGGCATCAC
CATCATCTTCTCAAGTTGCATCCTCTTCATCAATGGCTTCTGCATCAATT
GCATCATCTTCGCAAGTTATGTCATCTTCGGCATCTGTATCACCTTCACC
ATCTTCTTCAATTTCACCATCAGTTTCTCCCTCTCAATCAATGTCATCGT
CTGCTTCTATGTCATCATCCGCTTCAATGTCATCATCAATGTCAGTCTCG
CCATCAGCTTCATCGTCGACTGCACCAGCTTCATCCTCAGTAACTCCCCA
ACCTCCTACAACAAACCCAACAACAACTACTGCTCCAAAACCACACTATG
ATGTTGATGTACAAGTAGAAGATGAGCATACTGCCGAACCGTGTTTGTGG
CTCAAAGCCAACATCAGTGTCACCTACAGCCACGAGGTATCttcgattat
ttttgaaactacctcggaggtcctttaaattaactgtTGTTCGTTCCCGT
CCCCGTCAgtttgttaccagcttttcttgagattggctcgttagtttttt
ctgatttttggcacaaaggtgaaAAATAGTGATGCCCAAAATGTAatgag
cctgatttttgaaaagaaaatttttgcgcAAAGATGGGTATTAggaatgc
ccaaaacatgggcaagtccattttttgaaaaagattttatttgccAGAAa
ccgccgtttttgcagatttccattagtctttttctttctatttcttCGTA
TTTTCGcacaaaaacatcattgataacaatgctcgcCATCGaacatgatt
caattgtcaataaaactgatttttgacgccgcaactttctaaaaatcgct
ggAACAGCTGATTATCTTGAACttctgtactttatatttttgtgtCTAAC
Ctagtggaggtcctataaattaaccgttgcccgttcgttcgttcgttatg
aGCTTTTCTCCACAAAGAATaaaaaccctcgaatgtgacagcccgatttt
caaaaaacaatttggatcaatttgggccaaaatatgcccaaaaatgagtt
ttttgagATTTCCTCAAGTTTGAATCGTTAAAATGAtcgaagcagatttt
tgtaaaaaattttcggctcagaaaatgaatttctagctataagaatcact
attttcttttttccctactccccttccctctccccatcaacaatcaaaga
taaaatttaaggcgttttgcattttcgctaaacgctatattttctgactg
atagttttcatttttctactaATTACTATCTAACATTCATCAtaaggtag
gtccattcagcatcttgCTTGTTTCTCctgatttcaaattcaaatataGT
TCTTCCCTTTCTAGTGTAAAAAAGACTGGACATATATCAATTTTCTATTC
TCATTCCTTCTAAACAACCATATTGTCTTGGTCTATTGAGATTAGTCTAT
TGAGATTAGTCTATTGAGATTAGGCTAGTTAGAAATTGCCGTAAAACAAT
AGGCTCAAAAGAGGTTTGGCCACGACGAAGTATAGAACTACTAACTCTTG
TTTATTGTAGAACGTTTCTGGTCAAATCTCTTTGAATGGAAAAGGTGCTA
AATCTTCTGGGACTTGTTCAGATCTTACAAAAGCTGGCGACACATCCAGA
GTAACTTTGACATGGGAAAACGAACAGATAAAATCAATGACTGTTATATT
CTCAACTGGATCAAAAGAAAACTGGTTTGTCAGCAAAATTGGTGTCGTTC
TTGATGTCCCTCTTTCCTCTAACGGTAAGAATTATGAACAAAGTTTTCAT
GCCCACAAGACTATTTAAGGCATGAATATATGTTTACAAGTAGAACTTTA
TGAAAATGAGTGGCTGTCTAAAAACTATTGAAAGTACAAAAATACGGAAA
GTACGGAAAACCAACCTAAAACGACTACACGTTGATCTCCCTTCATGATT
gggatttttcacatttttagaaatagGTGTTAAAAACTATTATACTGTTG
TTACATTGCTTTTGTAATGTTTTTTGACACTTTCAGGACAAGTTATTGCG
AATAAGACTTTCAAGGGAGATGAGAATACCGAATTCTTACACGCTTCACA
AAATAAATCATACTCGTGCAGTGAACTAGACACGGTCATCTTGGACTCCA
CAGCTGCCAATGTCAGCATTGCTATCATTGACATTATGGTGCAACCATTC
ACACACAATAATACTATGGTTGATTCTAAAGGTATGGGTGTGTATTTCGC
TGGAAATCTGTCCTCTAAAGCTTTTTATTGTTGCCGTGAGAATTTATTTT
GCTCAAATGTCTGAAGTTTAGctttatgattttgatgaaaaactaaCTTC
GGCGAATCCTTGATTCTATGCAGTGCAGACAATTCATTGTATTTCTGATT
TACTATGAATAGATGGAATTTGCCGTTTATTAGGCTTAAATAAAGGTACA
TATAGGCTCTAATATTCACTTTGCTTTTCAGAAAACGATGCTTGTTCAAG
CAAATCAAAATCTTCCAAATCAAGCTCCATCGTTCCTATCGCCGTTGGAT
GTGCCCTTGCTGGCCTTATTGTTATTGTTCTGATCGCTTATCTGATTGGT
CGAAGAAAGAACGACGGCCGTGGTTACCAACAAGTGTAA Coding sequence (CDS) from alignment at sc0000057_pilon:1235559..1242097+ >XLOC_031667 ID=XLOC_031667|Name=XLOC_031667|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2232bp|location=Sequence derived from alignment at sc0000057_pilon:1235559..1242097+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGACCTTAGTTCTAGTACTACTATTTACCACAGATGAAGACCTTAG
TTCTAGTACTACTATTTACCACAGCCTGCTTTGCAAGTGGTTCATCATCT
GTAGCAGCTCCCTCAATAGCTCCTTCAGTAGCTGGACCTTCATCAGTTGC
TACAGGATCCACAACAGCAATGCCTGCTGACCCAACTTCAATGGCATCAC
CATCATCTTCTCAAGTTGCATCCTCTTCATCAATGGCTTCTGCATCAATT
GCATCATCTTCGCAAGTTATGTCATCTTCGGCATCTGTATCACCTTCACC
ATCTTCTTCAATTTCACCATCAGTTTCTCCCTCTCAATCAATGTCATCGT
CTGCTTCTATGTCATCATCCGCTTCAATGTCATCATCAATGTCAGTCTCG
CCATCAGCTTCATCGTCGACTGCACCAGCTTCATCCTCAGTAACTCCCCA
ACCTCCTACAACAAACCCAACAACAACTACTGCTCCAAAACCACACTATG
ATGTTGATGTACAAGTAGAAGATGAGCATACTGCCGAACCGTGTTTGTGG
CTCAAAGCCAACATCAGTGTCACCTACAGCCACGAGCCTGCTTTGCAAGT
GGTTCATCATCTGTAGCAGCTCCCTCAATAGCTCCTTCAGTAGCTGGACC
TTCATCAGTTGCTACAGGATCCACAACAGCAATGCCTGCTGACCCAACTT
CAATGGCATCACCATCATCTTCTCAAGTTGCATCCTCTTCATCAATGGCT
TCTGCATCAATTGCATCATCTTCGCAAGTTATGTCATCTTCGGCATCTGT
ATCACCTTCACCATCTTCTTCAATTTCACCATCAGTTTCTCCCTCTCAAT
CAATGTCATCGTCTGCTTCTATGTCATCATCCGCTTCAATGTCATCATCA
ATGTCAGTCTCGCCATCAGCTTCATCGTCGACTGCACCAGCTTCATCCTC
AGTAACTCCCCAACCTCCTACAACAAACCCAACAACAACTACTGCTCCAA
AACCACACTATGATGTTGATGTACAAGTAGAAGATGAGCATACTGCCGAA
CCGTGTTTGTGGCTCAAAGCCAACATCAGTGTCACCTACAGCCACGAGAA
CGTTTCTGGTCAAATCTCTTTGAATGGAAAAGGTGCTAAATCTTCTGGGA
CTTGTTCAGATCTTACAAAAGCTGGCGACACATCCAGAGTAACTTTGACA
TGGGAAAACGAACAGATAAAATCAATGACTGTTATATTCTCAACTGGATC
AAAAGAAAACTGGTTTGTCAGCAAAATTGGTGTCGTTCTTGATGTCCCTC
TTTCCTCTAACGAACGTTTCTGGTCAAATCTCTTTGAATGGAAAAGGTGC
TAAATCTTCTGGGACTTGTTCAGATCTTACAAAAGCTGGCGACACATCCA
GAGTAACTTTGACATGGGAAAACGAACAGATAAAATCAATGACTGTTATA
TTCTCAACTGGATCAAAAGAAAACTGGTTTGTCAGCAAAATTGGTGTCGT
TCTTGATGTCCCTCTTTCCTCTAACGGACAAGTTATTGCGAATAAGACTT
TCAAGGGAGATGAGAATACCGAATTCTTACACGCTTCACAAAATAAATCA
TACTCGTGCAGTGAACTAGACACGGTCATCTTGGACTCCACAGCTGCCAA
TGTCAGCATTGCTATCATTGACATTATGGTGCAACCATTCACACACAATA
ATACTATGGTTGATTCTAAAGGACAAGTTATTGCGAATAAGACTTTCAAG
GGAGATGAGAATACCGAATTCTTACACGCTTCACAAAATAAATCATACTC
GTGCAGTGAACTAGACACGGTCATCTTGGACTCCACAGCTGCCAATGTCA
GCATTGCTATCATTGACATTATGGTGCAACCATTCACACACAATAATACT
ATGGTTGATTCTAAAGAAAACGATGCTTGTTCAAGCAAATCAAAATCTTC
CAAATCAAGCTCCATCGTTCCTATCGCCGTTGGATGTGCCCTTGCTGGCC
TTATTGTTATTGTTCTGATCGCTTATCTGATTGGTCGAAGAAAGAACGAC
GGCCGTGGTTACCAACAAGTGTAAAAAACGATGCTTGTTCAAGCAAATCA
AAATCTTCCAAATCAAGCTCCATCGTTCCTATCGCCGTTGGATGTGCCCT
TGCTGGCCTTATTGTTATTGTTCTGATCGCTTATCTGATTGGTCGAAGAA
AGAACGACGGCCGTGGTTACCAACAAGTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000057_pilon | genome | sc0000057_pilon:1235559..1242097 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 976-1131:6384 |
| Aaloc | 781-972:5939 |
| Aaloc | 565-777:5461 |
| Aaloc | 343-564:4115 |
| Aaloc | 40-327:3827 |
| Aaloc | 1-36:1 |
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