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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000057_pilon:933517..936648+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031658 ID=XLOC_031658|Name=XLOC_031658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3132bp|location=Sequence derived from alignment at sc0000057_pilon:933517..936648+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTATAAGAGGCAGAGAACTATGGCTACTCGGATTCTTGAACCAAA
TGGCATAACAActataaaacaagaaaaattataCGAAAAAGGTTTGTggg
gtgaaaaaaaaattttgataaattattcAAATAATACTTGATCACTTTGA
TaaatattgatatatttttttctttgatgtatTATTTATTTATGCCGCCC
CTTTCAAAGTCTTTAAAGATGTTTGTTTGCTCAAGCCTCTTTAAAGTTTT
AAACCCAGAACCAAAAAAGCTTTTAACGAACAACTTTCCATCTTTTGATG
CACAGGTTTAAGCAAGAAGCCAGTTCATTTTTTAGATAGTTCCATAACAA
ATCATTTTCTGAAAGCATaataaaattctttctttttacaGAAATACTAA
CCGACAAGAAACCTCTCTCGTTATGCCGAGTTTGCGGCGACAAATCGTCG
GGCAAACATTATGGCGTCTATACGTGCGACGGTTGTCGTGGTTTTTTCAA
ACGTGCCGTACGACGAAATTTGGACTTCCGTTGCAAAGAGAAAGGACAGT
GTCAGGTTGATGTGGCAAGACGGAATCAGTGTCAAGCATGCAGGTGGAAG
AAATGTTTAGAAGTCAAAATGAACAGAGATGGTAAGatgtctttcaaaaa
aattattaaattcttaacattttagccaccgaagccttatattcttatat
agtttgttcttataaaaaaacgtgtatgaagtCTTTGAGCTCCTGGGATG
TTCTCCAGatgttttaaaattgttcttaattttgtcattttcaattttct
gggTATACAGTATTTTTATGCAATTTCCCAAGGAATTGGGTACGTTTTAG
AATCCACGTACTTAATAtgtttaaaactttttcttaatattctggcttgt
cttatgttcttataaaaaacgtgtaatatatGACACTTTTGTTATACCCG
GGCGATATCTCATCCTCTAAACACGAAGATTTCTTGAACGTcgacgtgtt
tttttttttgttaggaCAATATTactgcttcttttgaaaacacagtttaa
atacacatttttttaaaagaaaaaactatgtaagaacataaggcttccaa
aggcctcaaaaactttggatgttcttataaaaaaaacacgtgtacaaCAT
CCAGCTTCAGATTGTACTAAGATTGTAATTAAAAACAGGGCAGAatatat
ttcaaagttttaatcCCAAATGATGAAtaagaatgaaattttgtttggtG
GTAGCttttcagaaataaaaattaacGTAAATCTTTTCATTTCAGCTGTT
CAACACGAACGCCCGCCACGCACCGCCCATACTCAAATCAACACatccaa
caacaacaataactTGAGTCCAACTATGACTCCCCATACAGGTGATACCA
CCAATCTTCATCACAACATTATGGGAGCATATCCAGACCCAAGTTTTATG
GCTAACACGGGCGGTCAAAATAATAACGCCCATCAAAGAAACAACAACAA
TTTCAATAGTTATAATAATAATCAGAATCAACAATTCCACCCTAACATGT
ATCCACCCTCACACCCTAGCAATTTCTCACCACCTTATACTCCAGACGAT
GAAAACCCAGACCGGAAAAATGGATTCTTAAACATTACGTCACTAATGCA
AAACAATAGCAATAACAATAGCACAGATTTGATTGACACTCTTCACAATA
TGCCAGATGATGGTCTGGATAATATCAACCATGAATCATTGATTCCAAAC
ATCAACGAATTTCCAACACAAAGTATTgtaaatcctgaaaaaatctACGA
GTCTTCAGTCCGTATTTTATACGCATCAGTCAGCTGGGCAAGAAGTATTC
CAACTTTTATAGAACTCCCTTTTACAGACCAAGCTTTATTATTAGAAGAA
TGTTGGAGTGAACTATTTATTCTTTGTATGATTCAATGCTCCGTACCAAT
GGATCTCAGCGTTCTTCTTTCCGCCGCGGGTGCACACGCGGAAAAGGAGA
CATCTTCAAACGTACCAGGAAGTGTTCAGGACTTAGGTACGCTACAACAC
ATTGTGCAACGATTCCAGAATCTGGCAATCGACGCAACAGAATTTGCATG
TCTCAAAGCTACAGTTCTTTTCAAACCTGGTAAGCTCTTTGACAACACTT
TCATTTCGAACTCCAAAATAATCCCTTCCTGATAACAGATGTGTAGTTTT
CTTACGCGGCACGCTGAAAGCTCTGAAGATTGCTGAAAGCTAACCGTATA
TTTTATCCCAcgcctttagagcttcagcttCATGCACAATTTTTACCTGG
CTGAATTCTTTAACCCCTAGTACGGACCCATACTTGTTTCGTGTCTTGAA
GCCCATCCAATTTTTATCCTTCAATTTTTAAAGGTCTTACAATTATTCTT
CAAGCATAACAAAGATCAAGGCTATGTTGTCCATAACGAGAGCAATAATA
TAGAGAAAAATGATGACAAAATTGCTTTTTCTCCAACCGAGCGCCTAAGT
CTGATCTACACGTTCATTTTAgaccaaattcaactttttttttttttttt
tttttttttcttttttttttgtagcaTAGTATTTGCAATgataaaaagat
ctaaaaataGTACAACGTAATTTTGCTTAATATtgatgataaagtaaaaa
tctttcctaaactaaaaaacattcgcaggagtaaaaagaagacattactg
TCTTTTCACCTAACCCCTTGAAgcgaagtttgtttatttacagACTAAGT
Agtgaaaaaaagtataaatgtaatatagtttatataataataaagagaga
aagaagtagaagataaaattattaacaaagagACACTTATTAGATGGCCC
CATTTACACCAACCTATATTTGCTTCAACTTTCGTTTAAGATCTTCCCGG
GATACGTAACACACAATACGTTGAACATTTACAAGACTACGCGCAAAGCA
TGTTGGGTGAATATGTACGAACTGCTCATCCCAACAATCCTGCACGGTTT
GGAAAATTGTTGTTGCTGTTGCCATCGTTACGCTCCGTTACACCCAAATC
GATTGAGAACTTGTTTTTCCGTAGTGGTATTGATCAACTCCCTATCTATA
AAATGCTGTGCAACATGTTCAAAGCGAATTGa Coding sequence (CDS) from alignment at sc0000057_pilon:933517..936648+ >XLOC_031658 ID=XLOC_031658|Name=XLOC_031658|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2814bp|location=Sequence derived from alignment at sc0000057_pilon:933517..936648+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTATAAGAGGCAGAGAACTATGGCTACTCGGATTCTTGAACCAAA
TGGCATAACAActataaaacaagaaaaattataCGAAAAAGATGGAGTAT
AAGAGGCAGAGAACTATGGCTACTCGGATTCTTGAACCAAATGGCATAAC
AActataaaacaagaaaaattataCGAAAAAGAAATACTAACCGACAAGA
AACCTCTCTCGTTATGCCGAGTTTGCGGCGACAAATCGTCGGGCAAACAT
TATGGCGTCTATACGTGCGACGGTTGTCGTGGTTTTTTCAAACGTGCCGT
ACGACGAAATTTGGACTTCCGTTGCAAAGAGAAAGGACAGTGTCAGGTTG
ATGTGGCAAGACGGAATCAGTGTCAAGCATGCAGGTGGAAGAAATGTTTA
GAAGTCAAAATGAACAGAGATGAAATACTAACCGACAAGAAACCTCTCTC
GTTATGCCGAGTTTGCGGCGACAAATCGTCGGGCAAACATTATGGCGTCT
ATACGTGCGACGGTTGTCGTGGTTTTTTCAAACGTGCCGTACGACGAAAT
TTGGACTTCCGTTGCAAAGAGAAAGGACAGTGTCAGGTTGATGTGGCAAG
ACGGAATCAGTGTCAAGCATGCAGGTGGAAGAAATGTTTAGAAGTCAAAA
TGAACAGAGATGCTGTTCAACACGAACGCCCGCCACGCACCGCCCATACT
CAAATCAACACatccaacaacaacaataactTGAGTCCAACTATGACTCC
CCATACAGGTGATACCACCAATCTTCATCACAACATTATGGGAGCATATC
CAGACCCAAGTTTTATGGCTAACACGGGCGGTCAAAATAATAACGCCCAT
CAAAGAAACAACAACAATTTCAATAGTTATAATAATAATCAGAATCAACA
ATTCCACCCTAACATGTATCCACCCTCACACCCTAGCAATTTCTCACCAC
CTTATACTCCAGACGATGAAAACCCAGACCGGAAAAATGGATTCTTAAAC
ATTACGTCACTAATGCAAAACAATAGCAATAACAATAGCACAGATTTGAT
TGACACTCTTCACAATATGCCAGATGATGGTCTGGATAATATCAACCATG
AATCATTGATTCCAAACATCAACGAATTTCCAACACAAAGTATTgtaaat
cctgaaaaaatctACGAGTCTTCAGTCCGTATTTTATACGCATCAGTCAG
CTGGGCAAGAAGTATTCCAACTTTTATAGAACTCCCTTTTACAGACCAAG
CTTTATTATTAGAAGAATGTTGGAGTGAACTATTTATTCTTTGTATGATT
CAATGCTCCGTACCAATGGATCTCAGCGTTCTTCTTTCCGCCGCGGGTGC
ACACGCGGAAAAGGAGACATCTTCAAACGTACCAGGAAGTGTTCAGGACT
TAGGTACGCTACAACACATTGTGCAACGATTCCAGAATCTGGCAATCGAC
GCAACAGAATTTGCATGTCTCAAAGCTACAGTTCTTTTCAAACCTGCTGT
TCAACACGAACGCCCGCCACGCACCGCCCATACTCAAATCAACACatcca
acaacaacaataactTGAGTCCAACTATGACTCCCCATACAGGTGATACC
ACCAATCTTCATCACAACATTATGGGAGCATATCCAGACCCAAGTTTTAT
GGCTAACACGGGCGGTCAAAATAATAACGCCCATCAAAGAAACAACAACA
ATTTCAATAGTTATAATAATAATCAGAATCAACAATTCCACCCTAACATG
TATCCACCCTCACACCCTAGCAATTTCTCACCACCTTATACTCCAGACGA
TGAAAACCCAGACCGGAAAAATGGATTCTTAAACATTACGTCACTAATGC
AAAACAATAGCAATAACAATAGCACAGATTTGATTGACACTCTTCACAAT
ATGCCAGATGATGGTCTGGATAATATCAACCATGAATCATTGATTCCAAA
CATCAACGAATTTCCAACACAAAGTATTgtaaatcctgaaaaaatctACG
AGTCTTCAGTCCGTATTTTATACGCATCAGTCAGCTGGGCAAGAAGTATT
CCAACTTTTATAGAACTCCCTTTTACAGACCAAGCTTTATTATTAGAAGA
ATGTTGGAGTGAACTATTTATTCTTTGTATGATTCAATGCTCCGTACCAA
TGGATCTCAGCGTTCTTCTTTCCGCCGCGGGTGCACACGCGGAAAAGGAG
ACATCTTCAAACGTACCAGGAAGTGTTCAGGACTTAGGTACGCTACAACA
CATTGTGCAACGATTCCAGAATCTGGCAATCGACGCAACAGAATTTGCAT
GTCTCAAAGCTACAGTTCTTTTCAAACCTGATCTTCCCGGGATACGTAAC
ACACAATACGTTGAACATTTACAAGACTACGCGCAAAGCATGTTGGGTGA
ATATGTACGAACTGCTCATCCCAACAATCCTGCACGGTTTGGAAAATTGT
TGTTGCTGTTGCCATCGTTACGCTCCGTTACACCCAAATCGATTGAGAAC
TTGTTTTTCCGTAGTGGTATTGATCAACTCCCTATCTATAAAATGCTGTG
CAACATGTTCAAAGCGAATTGaATCTTCCCGGGATACGTAACACACAATA
CGTTGAACATTTACAAGACTACGCGCAAAGCATGTTGGGTGAATATGTAC
GAACTGCTCATCCCAACAATCCTGCACGGTTTGGAAAATTGTTGTTGCTG
TTGCCATCGTTACGCTCCGTTACACCCAAATCGATTGAGAACTTGTTTTT
CCGTAGTGGTATTGATCAACTCCCTATCTATAAAATGCTGTGCAACATGT
TCAAAGCGAATTGa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000057_pilon | genome | sc0000057_pilon:933517..936648 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1168-1407:2893 |
| Aaloc | 334-1164:1298 |
| Aaloc | 94-330:394 |
| Aaloc | 1-90:1 |
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