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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000210_pilon:401703..406829+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_031517 ID=XLOC_031517|Name=XLOC_031517|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5127bp|location=Sequence derived from alignment at sc0000210_pilon:401703..406829+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTAAATTTGATGGGACCAAGGGACCTCCAGATATCAATGGAATGGT
CAGTCTCAAAGTTGACAATTTAACATACAGGACCAGTATGGCTGATCTGG
AAAAGTAAGTCTAAATTTGTCATTCAGTTAAAATTGATCATTTATCGTAA
TCCTCTTTACTTACCCTCTGGCTTTTTAGAATCAGAGACAGTGGTATAAA
AAGAGTCTTTTCTGAGTAAGAATTTATCAATGCTGTACTGTATGTATGTA
TATTGGAAATCTTGGCTGATTTGTTGTGTTGAGTCAATTTTTCATCCTCA
GATTAAAAACTTTGCTATTAGcgtagaccttttcgcctttccatccgcca
tattgaattgtatgcaaaaattatggtagccaaattgccgtggtgaaatt
cccttagaaagtatgcaaaacatatgcaaaaagaaagtattaatataaaa
cttaaatgcataattggcattatattaaagtgtaatgggccagtatggat
tccacgaaatctcgcgccgaagatatttttccgtacaGCAAGCCTCACGG
CAAGCAAAActtcttttgtaccaacattcaatttttcaataagggtgcaa
gatgggaaaagaggcgcatgcgccaacatgattaataaattgacgcgagc
gaaagcaaatttagccaaatgaaagctaaaaatggattatggagtcattc
gcgccgagctggaattattactttacgccaactaaaaatcaaacaatctt
tgtaagtacccttacgccaatgcgccaaaaacgttttagttagggtgcgc
actcgtcgggattttttgcgtggaaaaagtcgaaaatcaaaattagaaca
ttccatccatcataacttatccttaacaactccaaacttgttcattcttt
tttttttaatactcagaatttatcagagaaaacaaagaaaaaaaccccat
cccattacctaccttcaataaaaagatataccatttattagacatcaagg
tgaaaaaatggcgactcggaattcgtggcaccaccgtctaccttgaccac
catttttcaaatggctatcgctaatgagctggattagttatagactcgcg
gttttttttataaaacgcgggaaagatcgtactttagtttgtcacgtggt
agccttttcgataatctacgggccgtctttaaatcgagaaaaaagaagaa
atttcaattttttggcactttcctgaaatttttatcagggcTACCATATA
TGcttggaaagctaagggtttcatcttttcattggtaaaatttgttttta
gctatcatttccagctcattagcgataggctaaagtttaacagtcatcgg
gccgattttcagaccgcgccagcaaaactcctcacgccccgccacacgga
agactagatttcatccgccatttttggcgcgattttggtgcttccgaaaa
ttatttcttgctggcgtggtgtaaggaggcgattctttgaaaaggttgtt
tttttgtggtttgaaaatggaataactttggaactacttaaccaatttta
acaaatgacccctcattttcctcacaaaggtaaggactttcaaataaaat
tagtttggttttcaaaatttgaggggaaaattttggcctgaccaccctat
tttagttgtacgccgaagatcttcggcgttagttacacgaaatccatact
gggtaatgggccattccagaaaatttttgttaccccccatcggacgacgt
gcatttttaaatattttctagcctcggaaataattttttttttcagtggt
gGTCAGAAAgttcgataaaaatccatgtacttttgcaaaatgcattggaa
ttccactctttttgtctgttttaattgaattgccttggaaattcatacat
tttctactcttgccttggaaattttgaattttggtgaaaacttgtgCCCt
ccggaaatcctgtgtcgtccgcccccctgttacagacaaattctggaatg
ccccaatcttgtagaagaaagattaaatttgcttctttttaaaactagaa
ataatcaaattcgcccATCTCTTAGAACTAGCAGTAGCACTTCAAAAACC
ATAACATCACCCacgaaggtacaaaaataatccttattcggctgacggta
aattattctcctgggaatagaatcgccaaacaatcaaatcaaaacatcga
tCTGAATGCGTGACGTCgagtcataattactgctttcagtttgcgtgttt
tgcgtgtgtactccgtcttcgtggaatttttaatggcatgaaaacagaat
atgctatgtcttcaagaacaaatttctaaaaggcttttgttgttcggtaa
atacttctttttggattaagaaattccatcttttattgttctaatgatta
taaaatttatttataagatgctttgttgtctttttaatctttgtgtaaac
ttgcatatgttttgcatattttccaactaaatccaaccacaggctttttc
gttcctatatttttgcatacaattcaagatggtggatggaaaggcgaaaa
ggtctatagtcGTTTGAAAGAACACAACGATCTTACTAATCACTCCAGAA
GAATATTGGTAATTTCcaaagcactttgaaaaattgactggattacagag
tgtttttttttacctgaaaattcCTGTTGTCCACCCcctatataaaattt
ttttttggcttgaaatctaaaattaaaGTAAATCAGCCTGACTCTGAATC
CAGTTATCTTGattgatataggagttttagTCTATActgtttgttattca
atagactatTGTGTTCTCCCAAACCACAATTTCAAGGCCAGTAAATATct
caaaactattgaaaatctgttcaaattttgatattttttcatttgatgtT
ATCAATAAAAATCTCATTGGTTGTAACTTGTATCCATTTTAGCAATAAAC
AAGCCATTTTAAGCTAATTTGGTTTGCAAAAAGTGCAAGTCTATAATTTA
AACTAATAAACTGTCTGGAATCTGTGAGATCTTTGACTTGAGCAAAATAA
ATcttctcaaaaatttcaaaactgcttctttttagcaagaaaaataatca
gtaaaattaaatttaaaaaaaggcaAGCTTTACTTAATGTTTGTAAAGGt
tctttgacaaaaaactttcgaattttttatcggcattgggccgataagct
tcagaccccctcccccttgctcttatcagccaaaattttcgaaaccaatt
tttacatcttcgaaaacacaattttttccaatcatgTCCGCCATTGCGTT
GGTCTTGCCTTCCCACCTGTCTTCGTTGAGTTTTTATCTATTTGCACCAA
CATTAAGTTTGTTCAtacccgcattgatattgttaatcaaaacgaaagtt
aaaaagacCCGATGAAGTTGCAACATTTTGAAGGAAACGGCAGCACGCTg
tccaattaaaaaaaagttttttatcaaagctaattcaaaactgtattttt
aaagttgcgaatttgtgcgcaaaggtgaaagcaagtgaaattgtatgctt
tcagttgagtttgtggacgaaatcagaaagaaattggtagttagaccccC
CCCCACCCCCTTATCAGCCCAATACCGATAAAAAATTTGAAAGTTTTTTT
TGAGGATCCTTAAAACGTTGACCCaaattttattgCAGTGATACTTTTCT
GGAAATAAAGGAAATGCTACCAgtcatttttcaggcaaaagcCCAATTAT
GGActgaaaaatcaaatatttatgtttttgatttactttgccacattttc
attagaaatagaaaatctAGCTAATTTTTTATATTCCTTCTCTAGTTGCA
GTTTTCACCAGCAGtcatttcaaagtttaataagaAAGGGGTTATGAAAG
CTGATTGCAGAAATGCTGATGAGAGAGCAGCTACTCCTGTCTGCAGTTTT
CTATGGTTGCAGGTGCAAAGCAGATTCCGTTCATCTCAACTAAATTTCTT
TAATGCTGTTATTACCATTATGAAAACCTGTTCAGTGCCTTAAGTTTGCT
GATTCCTGTTTTGATAATCCCTCCACAATAGTTTCCTGGTTTGAATGTGG
GTGAACAAGATTGATTGCAGTAAACTGCTGTCCAGTACTCAAACCACCAT
GTCTGGTTGAAAGCAGTTTACAAGGTCTCTCTTCGACATCAAGCAGAAAT
AAGTTCAAAATCCAAGCCGCCTTTTGTGTTGGACTGCTGCTCCTGTCCAT
TTTTGTATTTCCAAACCAGTCCAGTTACAAGTGATGCGGTTGCTGCTTTA
ATTGCACTTTTACTACACTGGGTAAATACTGCTATCTTTAAACCTAACTG
CAAAGGCTGTCATTTGGGAATAATCGAATCAAGGTATTCAGGCTCTGcaa
attttaggctgaaaacatTGGACACTGTACTAACTTAGGAGTGAGTCTGG
CTTGATTGGCTTGGGCCAATCGACTGTAGCTCGAATTAAACGAATCAAAA
CTATTTTGGCTTTCCTCAGGCCTTGCCTATTTAATTGATACTTAAAAACT
ACTCCCTAAAAGTTAAAATTAGACACTTGATAtgtatttttgagaagata
GATTTTACTGCTTTATTTATCATTAACATTGAGAAAATTTTATGATTAAA
CTTTTAGATACTTCAAGAAATATGGAGATGTTGGAGACATTTACATCCCC
AGAGACCGGAATACACAGGAGTCACGTGGTTTTGCTTTTGTACGCTTTTA
TGAAGAACGAGATGCTGAAGATGCAATGGATGGCATGGATGGAAAGGTAG
TTCATATGACCTTATTTTTGCTGTGCTATAAAAGTTTCTTTATTAATATT
ATCGTTAGCGGATGCATTTCCCTCGATTTCTATAAAACCAATCAGTGGAG
AAGTGCGACTCTTCTTGTAATGGTTGATGTACATTTCTAACTTCTGCTTT
AAGGTCATTGATGGACGTGAAATTCGAGTAGCCATGGCTAGGTACGGTCG
ACCAGCAAACCAATATGATCCAAGACGACAAGGACGCAGTGGAGGGCGTG
GTAGTCGTGATCACAGAGATCGAGACAACCGTGACCGAGATCGAGATCGA
TCAAGACGATCCCCTCGCAGAAGGTGA Coding sequence (CDS) from alignment at sc0000210_pilon:401703..406829+ >XLOC_031517 ID=XLOC_031517|Name=XLOC_031517|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=834bp|location=Sequence derived from alignment at sc0000210_pilon:401703..406829+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTAAATTTGATGGGACCAAGGGACCTCCAGATATCAATGGAATGGT
CAGTCTCAAAGTTGACAATTTAACATACAGGACCAGTATGGCTGATCTGG
AAAAATGAGTAAATTTGATGGGACCAAGGGACCTCCAGATATCAATGGAA
TGGTCAGTCTCAAAGTTGACAATTTAACATACAGGACCAGTATGGCTGAT
CTGGAAAAATACTTCAAGAAATATGGAGATGTTGGAGACATTTACATCCC
CAGAGACCGGAATACACAGGAGTCACGTGGTTTTGCTTTTGTACGCTTTT
ATGAAGAACGAGATGCTGAAGATGCAATGGATGGCATGGATGGAAAGATA
CTTCAAGAAATATGGAGATGTTGGAGACATTTACATCCCCAGAGACCGGA
ATACACAGGAGTCACGTGGTTTTGCTTTTGTACGCTTTTATGAAGAACGA
GATGCTGAAGATGCAATGGATGGCATGGATGGAAAGGTCATTGATGGACG
TGAAATTCGAGTAGCCATGGCTAGGTACGGTCGACCAGCAAACCAATATG
ATCCAAGACGACAAGGACGCAGTGGAGGGCGTGGTAGTCGTGATCACAGA
GATCGAGACAACCGTGACCGAGATCGAGATCGATCAAGACGATCCCCTCG
CAGAAGGTGAGTCATTGATGGACGTGAAATTCGAGTAGCCATGGCTAGGT
ACGGTCGACCAGCAAACCAATATGATCCAAGACGACAAGGACGCAGTGGA
GGGCGTGGTAGTCGTGATCACAGAGATCGAGACAACCGTGACCGAGATCG
AGATCGATCAAGACGATCCCCTCGCAGAAGGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210_pilon | genome | sc0000210_pilon:401703..406829 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 244-417:4954 |
| Aaloc | 106-243:4659 |
| Aaloc | 1-102:1 |
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