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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000356_pilon:48383..50958- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030990 ID=XLOC_030990|Name=XLOC_030990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2576bp|location=Sequence derived from alignment at sc0000356_pilon:48383..50958- (Clytia hemisphaerica_ch_hm2_pilon)
ATACAAAAGAGAAAACAAAAATTGAGAATGAATGATACAGGATTTAATGA
AGTAGAGGTGTTAAAGACAAGAGCAAGGGAGTATATCAAGCTTGATAATG
AGGAACAGTCAAAACCAAAGCTGAAAAGAACATCAAGAAATAAGAACTAT
TTTCTTTGCAAAGAACATCACACATTACCTCAGGTGTGGAAAGAGGAATG
CAATAAATGCGAAAATTGTTTGAAAATTGAAATTCTTGAGTGTCTTCCTC
TGGGTGTTTTGCCAAATGGGCTTGAAGTTTTGGAATATTTGCTCACTGTC
AAAATGTCAAACCCTGGCGCAAGAGATAACTTTGAACGTAAAGTTGCAAA
AGATGTTGTCCTGCAATGGATTTTCTGCAATGTATACCCCAAAGACGTAA
GATCAGTGGAAAAAGATATTATTTTGTTATTTGATAACTTTACAACATTG
AAGAAAAGAAGCAATTCAAGTAAATCGAGCGAATATTGGAAAAGATATGA
GCGATTTGTCAACAAACAAAGGCATTTGTTCGACATTATTGGTGAGTTTT
TCATCTTTGTTACAATAGTATAGCATGTGTATAGTCGATAAATCTTATTA
TAACTGTTTCTGCACTAACCTATTTTGGGTGATTAAACTAATTTTTGGTT
ATTTTTAGGTTCAAGAGAAAGAATAAAGGTGCAAGAAAGCCTATGGGATG
TCAAGATGTGTGAAAGAGACTGGATTTTTTACAGTAATCAGAACCAAACC
CCCCGGAAAGACTTCTGTTCAACTTACACTGATAGAAAGTGGGAAATAAG
GTAGGTTTATATCCCAAGGATATCACTTTGTAAAACGAGTCATTTCCAAG
AAGGGCTCAAAAGTGTAAAACAACAGGCTTTCATACTTATTATTCTGAAT
GAGGTTCTATGATATGAGTCCAACACTTTATTCATTTTAGCCACAACCGG
AAACTTGAAAGACTAAATCGATCAACGAACCAATCCTACTCTGAAGAGTT
CTTTCAAAACAACTCCCATCAGGAAATATCTGAATCCGAAGGAGAGGAGG
ACATCATGGATGATGATTTTCAACCTGAAGAGCCTCTGAAGAAGAGACCA
AAATTTCAATATGTACCAGTCTTCAGCAATATCAGCAATGATCCACTCCC
ATTAGAATACAGGCATATTCGTTCCGGTCTTCAAAGCGTTCGTCCAGAAT
ACTATGTTCTGATTGAAAAATTCATTTCTGTCTACCACATGTCGTATGAG
CAGGCAGAAGCTGCTGTGAGAGAAACTGCAAATGACTTATTTGGAAGAAA
TGAGTTTGGGAAATGGAAGTCATACAGTCGTGATGTAGAAATAGATGACA
ACACTCTACCAATGAGAAAAAATTCAAGAGTAAATTCAAAACTATTTGAG
GCTATGGCTTTGGGTCTTCTTGTTGAGGACATTATGGAGGATAAAACAAA
CAGTACATGTATTGTCTACTCAAATGATGGTTCAGGGATGAATCAAGTTG
GAAGCTATGTTGTGCAGTCACTGTCCATAAATGGAGTCCGAAGATCACTT
CCAACCTTTGGTGTTTTTTCTGAAACAAAAGAGACATTAAAAGATCTGCA
AATAACAACATTTGATATCCTGTCTGCGTCAAGCAATAGGAAGTACAGCA
ACAAAGATATATTGAAGAAAATTTCCTTTGTGATGTCAGATAGCACTGCA
CATAACATTGGTGTTATTGAGTCTGTTTGTGAAGAACTGGCTATTGATGA
TGTTCCAAAAACCTTGCTTTGCAATGTCCACCCGCTGATGATGTTTGATA
GGAAGATAAGAGAGCTTTGTCAGGAGATTCACAATCATCTTGGCGGGAAG
AAATTGGCAGATTGTTTCTATGTTGATGTTGACTTTCGGAGAGAATCTTT
TCCCATCAAGGCAGTGAAATGCCTCTCAAATTTCATTTGCAAAGATTTCT
CAGCAAAGCCTTGGAACTACAGCACTCACTTTGGGGAATTTATCCAACCA
AAGGAGAATGTCTCACTTTCATTGAAAGATTCCAGATTCAACAGACTGCC
TGTGTGCTGCATCAGCTTGATCTATCTGATTGATGACATTGCTGCCTACC
TTGAAAAGTATTCTGACATCCTAAACAACATTGCCATCATCGACAGAAGT
TTTGTACAGATGGAAATCCTTAAACCAATTTTTGCTGCCATCTCTTTACT
TGGTTAGTACTGTTGGTAGTTTTAATCAAGTTTAACCATTGGAAGCTCAT
TTTGTAATGATGTGTTTTAACAATTGTATTTGCTTCACTATGGCCACTGG
TTGTTAATTATGTAATGTGAAGTCCTTTAGGCAGTATATCATAACTTTCA
CTATTCATTTCTAGGCATCCATGTGACAATACCGTATCACGCATTGTTGA
TGAACACAGAGACAAATTATTCACTGATCTTGAAAAGCTTTTCTCAACTT
TACAAAGAGCTGACAGAGATACAAGCTTCCCGTCTCCTCACATTGGACAG
AGTCTTTACCTTTGTTTCTGAAGACACATTCCAAAATTCCCTTCCAAAGA
AGAAATTTCTATTAGAATCGCTGCAG Coding sequence (CDS) from alignment at sc0000356_pilon:48383..50958- >XLOC_030990 ID=XLOC_030990|Name=XLOC_030990|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4314bp|location=Sequence derived from alignment at sc0000356_pilon:48383..50958- (Clytia hemisphaerica_ch_hm2_pilon)
ATACAAAAGAGAAAACAAAAATTGAGAATGAATGATACAGGATTTAATGA
AGTAGAGGTGTTAAAGACAAGAGCAAGGGAGTATATCAAGCTTGATAATG
AGGAACAGTCAAAACCAAAGCTGAAAAGAACATCAAGAAATAAGAACTAT
TTTCTTTGCAAAGAACATCACACATTACCTCAGGTGTGGAAAGAGGAATG
CAATAAATGCGAAAATTGTTTGAAAATTGAAATTCTTGAGTGTCTTCCTC
TGGGTGTTTTGCCAAATGGGCTTGAAGTTTTGGAATATTTGCTCACTGTC
AAAATGTCAAACCCTGGCGCAAGAGATAACTTTGAACGTAAAGTTGCAAA
AGATGTTGTCCTGCAATGGATTTTCTGCAATGTATACCCCAAAGACGTAA
GATCAGTGGAAAAAGATATTATTTTGTTATTTGATAACTTTACAACATTG
AAGAAAAGAAGCAATTCAAGTAAATCGAGCGAATATTGGAAAAGATATGA
GCGATTTGTCAACAAACAAAGGCATTTGTTCGACATTATTGATACAAAAG
AGAAAACAAAAATTGAGAATGAATGATACAGGATTTAATGAAGTAGAGGT
GTTAAAGACAAGAGCAAGGGAGTATATCAAGCTTGATAATGAGGAACAGT
CAAAACCAAAGCTGAAAAGAACATCAAGAAATAAGAACTATTTTCTTTGC
AAAGAACATCACACATTACCTCAGGTGTGGAAAGAGGAATGCAATAAATG
CGAAAATTGTTTGAAAATTGAAATTCTTGAGTGTCTTCCTCTGGGTGTTT
TGCCAAATGGGCTTGAAGTTTTGGAATATTTGCTCACTGTCAAAATGTCA
AACCCTGGCGCAAGAGATAACTTTGAACGTAAAGTTGCAAAAGATGTTGT
CCTGCAATGGATTTTCTGCAATGTATACCCCAAAGACGTAAGATCAGTGG
AAAAAGATATTATTTTGTTATTTGATAACTTTACAACATTGAAGAAAAGA
AGCAATTCAAGTAAATCGAGCGAATATTGGAAAAGATATGAGCGATTTGT
CAACAAACAAAGGCATTTGTTCGACATTATTGGTTCAAGAGAAAGAATAA
AGGTGCAAGAAAGCCTATGGGATGTCAAGATGTGTGAAAGAGACTGGATT
TTTTACAGTAATCAGAACCAAACCCCCCGGAAAGACTTCTGTTCAACTTA
CACTGATAGAAAGTGGGAAATAAGGTTCAAGAGAAAGAATAAAGGTGCAA
GAAAGCCTATGGGATGTCAAGATGTGTGAAAGAGACTGGATTTTTTACAG
TAATCAGAACCAAACCCCCCGGAAAGACTTCTGTTCAACTTACACTGATA
GAAAGTGGGAAATAAGCCACAACCGGAAACTTGAAAGACTAAATCGATCA
ACGAACCAATCCTACTCTGAAGAGTTCTTTCAAAACAACTCCCATCAGGA
AATATCTGAATCCGAAGGAGAGGAGGACATCATGGATGATGATTTTCAAC
CTGAAGAGCCTCTGAAGAAGAGACCAAAATTTCAATATGTACCAGTCTTC
AGCAATATCAGCAATGATCCACTCCCATTAGAATACAGGCATATTCGTTC
CGGTCTTCAAAGCGTTCGTCCAGAATACTATGTTCTGATTGAAAAATTCA
TTTCTGTCTACCACATGTCGTATGAGCAGGCAGAAGCTGCTGTGAGAGAA
ACTGCAAATGACTTATTTGGAAGAAATGAGTTTGGGAAATGGAAGTCATA
CAGTCGTGATGTAGAAATAGATGACAACACTCTACCAATGAGAAAAAATT
CAAGAGTAAATTCAAAACTATTTGAGGCTATGGCTTTGGGTCTTCTTGTT
GAGGACATTATGGAGGATAAAACAAACAGTACATGTATTGTCTACTCAAA
TGATGGTTCAGGGATGAATCAAGTTGGAAGCTATGTTGTGCAGTCACTGT
CCATAAATGGAGTCCGAAGATCACTTCCAACCTTTGGTGTTTTTTCTGAA
ACAAAAGAGACATTAAAAGATCTGCAAATAACAACATTTGATATCCTGTC
TGCGTCAAGCAATAGGAAGTACAGCAACAAAGATATATTGAAGAAAATTT
CCTTTGTGATGTCAGATAGCACTGCACATAACATTGGTGTTATTGAGTCT
GTTTGTGAAGAACTGGCTATTGATGATGTTCCAAAAACCTTGCTTTGCAA
TGTCCACCCGCTGATGATGTTTGATAGGAAGATAAGAGAGCTTTGTCAGG
AGATTCACAATCATCTTGGCGGGAAGAAATTGGCAGATTGTTTCTATGTT
GATGTTGACTTTCGGAGAGAATCTTTTCCCATCAAGGCAGTGAAATGCCT
CTCAAATTTCATTTGCAAAGATTTCTCAGCAAAGCCTTGGAACTACAGCA
CTCACTTTGGGGAATTTATCCAACCAAAGGAGAATGTCTCACTTTCATTG
AAAGATTCCAGATTCAACAGACTGCCTGTGTGCTGCATCAGCTTGATCTA
TCTGATTGATGACATTGCTGCCTACCTTGAAAAGTATTCTGACATCCTAA
ACAACATTGCCATCATCGACAGAAGTTTTGTACAGATGGAAATCCTTAAA
CCAATTTTTGCTGCCATCTCTTTACTTGCCACAACCGGAAACTTGAAAGA
CTAAATCGATCAACGAACCAATCCTACTCTGAAGAGTTCTTTCAAAACAA
CTCCCATCAGGAAATATCTGAATCCGAAGGAGAGGAGGACATCATGGATG
ATGATTTTCAACCTGAAGAGCCTCTGAAGAAGAGACCAAAATTTCAATAT
GTACCAGTCTTCAGCAATATCAGCAATGATCCACTCCCATTAGAATACAG
GCATATTCGTTCCGGTCTTCAAAGCGTTCGTCCAGAATACTATGTTCTGA
TTGAAAAATTCATTTCTGTCTACCACATGTCGTATGAGCAGGCAGAAGCT
GCTGTGAGAGAAACTGCAAATGACTTATTTGGAAGAAATGAGTTTGGGAA
ATGGAAGTCATACAGTCGTGATGTAGAAATAGATGACAACACTCTACCAA
TGAGAAAAAATTCAAGAGTAAATTCAAAACTATTTGAGGCTATGGCTTTG
GGTCTTCTTGTTGAGGACATTATGGAGGATAAAACAAACAGTACATGTAT
TGTCTACTCAAATGATGGTTCAGGGATGAATCAAGTTGGAAGCTATGTTG
TGCAGTCACTGTCCATAAATGGAGTCCGAAGATCACTTCCAACCTTTGGT
GTTTTTTCTGAAACAAAAGAGACATTAAAAGATCTGCAAATAACAACATT
TGATATCCTGTCTGCGTCAAGCAATAGGAAGTACAGCAACAAAGATATAT
TGAAGAAAATTTCCTTTGTGATGTCAGATAGCACTGCACATAACATTGGT
GTTATTGAGTCTGTTTGTGAAGAACTGGCTATTGATGATGTTCCAAAAAC
CTTGCTTTGCAATGTCCACCCGCTGATGATGTTTGATAGGAAGATAAGAG
AGCTTTGTCAGGAGATTCACAATCATCTTGGCGGGAAGAAATTGGCAGAT
TGTTTCTATGTTGATGTTGACTTTCGGAGAGAATCTTTTCCCATCAAGGC
AGTGAAATGCCTCTCAAATTTCATTTGCAAAGATTTCTCAGCAAAGCCTT
GGAACTACAGCACTCACTTTGGGGAATTTATCCAACCAAAGGAGAATGTC
TCACTTTCATTGAAAGATTCCAGATTCAACAGACTGCCTGTGTGCTGCAT
CAGCTTGATCTATCTGATTGATGACATTGCTGCCTACCTTGAAAAGTATT
CTGACATCCTAAACAACATTGCCATCATCGACAGAAGTTTTGTACAGATG
GAAATCCTTAAACCAATTTTTGCTGCCATCTCTTTACTTGGCATCCATGT
GACAATACCGTATCACGCATTGTTGATGAACACAGAGACAAATTATTCAC
TGATCTTGAAAAGCTTTTCTCAACTTTACAAAGAGCTGACAGAGATACAA
GCTTCCCGTCTCCTCACATTGGACAGAGTCTTTACCTTTGTTTCTGAAGA
CACATTCCAAAATTCCCTTCCAAAGAAGAAATTTCTATTAGAATCGCTGC
AGGCATCCATGTGACAATACCGTATCACGCATTGTTGATGAACACAGAGA
CAAATTATTCACTGATCTTGAAAAGCTTTTCTCAACTTTACAAAGAGCTG
ACAGAGATACAAGCTTCCCGTCTCCTCACATTGGACAGAGTCTTTACCTT
TGTTTCTGAAGACACATTCCAAAATTCCCTTCCAAAGAAGAAATTTCTAT
TAGAATCGCTGCAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000356_pilon | genome | sc0000356_pilon:48383..50958 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1948-2157:211 |
| Aaloc | 685-1944:1636 |
| Aaloc | 544-681:1917 |
| Aaloc | 1-540:2577 |
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