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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:1638884..1645134+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030899 ID=XLOC_030899|Name=XLOC_030899|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6251bp|location=Sequence derived from alignment at sc0000063_pilon:1638884..1645134+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAATTACACCTTCTTTTTCTACCGACCACtaaaggccgctacccactc
agcattttatggtcggcgaacaaggcgcacggcttgggcgctttggtcgc
tgaacgcttttctcattccactgatccaaaataaaggggagatatgctgc
atattttttcttttttctattgttgatatttttgcaCACGGTACAAGAGA
GTTAAATGTCTCGTCTGATTGGCtacttaaaaaagaacaatagggaaGCT
GCACAGCTTggcgaaaaaagttgaaaagtttcaactcttgttgcgctcaa
agcgacaacctttgaaggcttgatttatgtaatttatgcaataatcaagc
cgtgcgccttgttcgccgaccataaaatgctgagtgggtagcggccttaa
GACCTACTAAGTATTGTAGGCCTTACGTTGGTAGCAAACTTGATTGGTCC
ACGGTCATGATATATTACGAGCATGAGTATAGGAAGGAAGCATTCAGGGA
GCTTGGGAATTTTACTGCAAGACGTCTTGAGAATTACGTGATAATTCCTG
AAATAGGTGTGGCAGGGCATGTCTCGCGAATTTATGACCTTTCCAATGAA
ACTCCGTTCAAGGCGTTTCCTGCTGGTGAAATTCCAATACTGTATCAGTT
AGATAATGGGTATGTTGTTTTCGAGTTTGGAGATGGCATTACTGCAAGAG
AGGTCGATGAATTTCCAGAATTATGGAGATTTTCAGAGGAAAGTTCGGCA
CTCGGAACTGTACCGATCATTGAAGGACATTTGGTGAGCCAGATGTTGAA
CCTAAAGTTAGCTTCTACAAATGAGAATGAGCAGATTTGTGAGCTACAAG
CTGAGCAGGAAAAACTGTACACAAGGATTCTTCAACATTTCCCCTCAACG
GCAAACTTATGGGTCAAACGTGGAAGAAATGTGGTAGCAAAACCACTGGG
TGATGCTATGGTATTAAAGGAATGTGATCTTGTCCAGAATTTTACAACAG
TTTGGTCACGTCGAGTAAATAAAACGTGCTACTTACATTGTGCTTTGCAA
CGTCCCGGCTCCTAAGAAATTGAAGGGTTTATGGACTTGACTAACAGGCA
GGGGCTGACGTCGAGTCCGAAAATTCGATGTTCGGAGCGAAACAACCTTA
CCTATAGTGTCGACGATCTCGAGGGAACATTCAAGGTCGATGCGCTTGGA
AATACTGAAAGGGTTTCCCAACCACTGAATTCTCTCTATGATACTTATAG
TTTCCAAGAAATAAAAGACATTGTTGGAGACCATCTAAACATCATTCTGA
AAGAAAGGCCAAGCTTTCCCCCTGTTGTCATACAGGATATTGTCACCAAA
TCATACGAGGTAATGAACGAAATTGGATGGGCATATGAGGACGTAAAGCC
TAAAGACAAGCACCAAGTTGGAATTTTTGCTGCCGTCGCCCATGAACTGG
GAGAGATTTTGTCTAGCTTCGGTCCTTCCAGAGTTATCTCGTCCTTGGAT
GACGCCATAAAGGGAACAGTGGAAGGTGTAGGACACGCTGGTTCAGACTT
GGTTGAAGCAATAGGAAACGCAGTGTCTGAGACCATCGATTCAACTGGAA
GCGCGGCGAATCAAGTTGAAAGTTGATTCGCAGAAGTGATCAAGGCATGG
TGGTCCATTATTCTTGAAGGTGGACTTTTGGTCTTGTTGATTGCCATATT
GGCCGTTATCTACAAGACTTATGGTCACCGTAAGAATTCGACAACCATCA
GTGCCCCGATTTACGAATCTACGAATTAACGAAGTGCACCCCGAGAAGCC
TCCAAGACGTTGGTTACGACTATAGACAGTGATAACACTAACATTCGAAA
GTTTTAGTTTGGGGACCAAACTTCCCGTAGGTGGAGGTATTGTCATGAGA
TGAACTTTTGAATGCCACTAGGCATAAATTCTTATTTCACCTGAGAATAT
AAACTcgagaaacagaaaaaaacagGGTCCTTCAAACTACCTCTCAACGA
GGAAAATTCTTCCTGTTTGGGAAGATTTATTGTTTGACACTTTAAATGTA
CAATTGACAAGTCGTATATGGACTCATATGCGTATATGGATTAAAGGAAG
CAGAGAACTCCGCTGAAGCCAACAGCGGAGGCTTAGGTGAAATGGCTGAC
TAGAACTTGTACTAAGATTATACTAAtgactttattttgttttacgAATT
ACTTGGTTTATGGAAAGAGGTTTTTAAGGCGTTAACTTCCAATTCTTTGT
TCCTATTGTGCTTTGACATCTATGATACCTAACCGGTTCTCTTCCAATTA
TGGCTTGGGATCCTGAACTAATCCGGGGACAAATATAAATATTGCTGTTG
TGGACTTTAGTCGGGAGTTACTTATTGAGCCGTACTCACTGCCCGTGAca
ataggcaagaataaacaatcctaaaaactgttaaaatagaACAGAAGCCT
AAAACATATTCTATTTTCTTTCAGTATGTCGATTAAATACAAATTTCCTT
TAGGATGTTGAACTGTTttgcaacattcatggtgtcattgagttgtccag
taaatcattaccgtgaaaagcacagctcaaaatcatatatttacgctgtg
ccgacgaatcgagattctattcatcgcgcaatcagcgaagagaaaagtaa
ccatgacgaccatccaagatcttggatgagcgtcaaagtcgatattttta
ttcccgtcgttgaaaacacaacttacaaaaagtcatcaatgctttgtaaa
aagagtcagtgatagagaatcataacattaagtctgtctattatttcgat
tcaattaaagtgacatttccataattaaaagtttagtaattactgttata
catttggggatcatgtaaaagatttctttcgaaataaactcatttcaact
acacttggaggtttctggggaattcgtaaatagtaaactgcatactgata
cagtctgctagacattaatatggtaatatttgttcttcatctttgatttt
ttctacagtgattagattgacacatgcgcgataaaatttctattatttgt
cttcagaggttactattttctttgaaaacttaacctctgatactcagggt
agtaaatcatgataggcaagaataaacaatcctaaaaattgttaaaatag
aatggaagcctaaaacatattctatttttattcagtatgtcgattggcaa
gataaatagaaagcaatcttcgaaaaagcaaacTTCCTTTAGGATGTTGC
ACTGTCTTGGGACATTCATGGTGCCATTGACGaggacaaaaaataccagg
ggcgccaatttcatagtttgcaccaccaagaaaatttaGCCAGGTTGCTA
CTGTCTTTATGCGATCGAATGTGAAGATTTGTACGCTGACATGAACGAGG
ATAAGCATCTCTTCAACTTCTCGGATTATCCGAGAAATCATCAATGTTTT
tcattacaaaataaaaaacggatTGGTAAAATGAAAGACGAGATGCATGC
ATCCCTTATCTTAGAGTTTGTTGGTCTACGCGCTAAGATGTATTCTATCT
TGGTCAATAggtcaaaagactttaacgttAAACGAGCAAAACGAGTGAAA
AATTGTGTTGTGAAAAAGGAAATTTGTCTTTCCAATTACCGAGACGCTTT
ATtgcaaaatattgaatttttacatttaATGAACAATATACGTTCCCATG
GTCATGTCACGTTTACTGTACAACAGAACAAGATATGGTTACGTCCATGT
GATGATAAAAGATTTATTATATCTGATGGTATAAGCACACGTCCTTATGG
ACATTACAAAAACACGGAAGAGATGGAAGACAATGTAAATtgatatactt
tttattttattttattgcatcttaattatattttaaatattacattcgca
tgatacatttattaCACTATTATACTATTTACTTCTTCACCGTAGGGACC
ATTGTTTGATTTAAAAGAAATCGACTTTTGAAAAGTCAATAGCTTCTTCA
TTCACCATTTCTTTCGTTTTTAATCTCAATCTTTCCACTcctgaaaactc
aaattttgaattcaggTATTTTATAATCTTCATGGCTTCTGctggaaata
aataaattctattTCTGGACACTCCTTCAGTTATGTAAAATGAGAAACTG
AAAATGATACGTTCTCGATTGAATTCTACTTTGACAATAGGACTATCGTT
ATCATCGCCATCAACATCCAAATTTAATATATTCTTGTCACGTGATGAAC
TGTAGAAAGCCACTAGGCACATATTTGAACGGAATACGAAAAACAAAGAC
ACGGAAAGGATCTTTCAAACTGCCTCTGATCGAGGTGGGTTCTCCCTGTT
TGGGTAGGTTTATTGTTTGACACCGAAGAATACATGTAAAATGACGCTGA
CAAATGCGTGTAGGAGTTAAATGAAGCAGAGACTCCGCTGAGACAACAGC
GGAGGGTTATGTTGAAATGGCATTGACAAAATGAAGCAGAGAATTCTGCT
GAGCCAAAACCAGAGGGTTATTGTTAAATGTCATTGACATTATTGACTTT
ATTGAGACTGAATTGATTACTGATTATTACGAATGAAATTGTGTATTTGA
AATGGATGTGGTTATTATTGACATGATTTGGTATGGAAGATAACAAGTTA
ATTTGACATTTATTATGGAAGTTGATAAGTGATATCAGTTTCAGCAGGCG
TTAGAGATACATCCCATGAACGTACAAAAATCCATGCTAAAAGAATGGAA
GTaagttttggttgatttttttaagACCGAACTGTTTGTTTATTACTTTA
ATGTCTTGCAAGGAGCTGTAAAACCTATGTAATGTTAGCACCGTTGGACA
AACATATTTTGAaccatttcaagaaaaattcgGTCGATCAAACATTGTTG
AATGTTGTTGATTAATGTTTGTTTTGACTGGTCAAATAACCATTATCAAC
TATTGACTCTTCCCGGTTCAGGAGTTTTGCATAATGGTTTAGAAGCGAGT
TATGAAGATTGAGATGTTGCTTATGCGACAATTGATGTCATTGTGTTGAC
AAAGTCCCCAGAGGGATTGCGGTTAATCATTTCCAAGCGCACGGAGGACG
CAGTTGAATTAAAGCCTGTTGACGTAAGAGCAAAAGATGCAGGACCTTga
ttttaatcaaaagaaaaggctggaagatttgataaaaaagaatgaGAACC
TTTTTGCCAACTCGGACTTAATGCTTGGCACTACCCACTTGATGGAGTAT
GACGTTGATACAGGGGATGCAGTGTCTATACAACTACACCGGCAAAGCGT
GCGGAGATTGACAAACAAATGTTGGTTGAAACCCCAATAATAAGATCCTC
AAAGAGAAGTAACTTGACGTTCATAGTAGACGACCAAGAAAGGACATTCA
AGATTGACGCGGAAGGATTTGTTGAAGAAACTCCAATGCACTTAAGTTCC
CTGGACGGTACCCATAGTGATCAGGAGATAAAGGGCAAGGTTGGTGATCA
CTTGAGTATCATATTGAAGGAAAAACCAAGCCTCCCTCCAGTCACAATAC
AAGATGTGGTTACAAAATCGTACGAGGTGATGAACGAACTTGGATGGGCA
TATGAAGATTTGAGGCCGAAAGACAAACACCAAGTTGGGATTTTCGCTGC
CATTGCCCATCAGCTAGGAGAGATTTTGTCTAGCTTTGGACCTTCCAGAA
TTATCTCGTCATTGGGAGACACCATTAAGGGTACGGTGGAAGGTGTATGA
CACGCTGGCTCAGATCTAGTTGGAGCGATAGGAAACGCAGTATCCGAGAC
CATTAATTCAACTGGAGATGCGGTGAATCAAGTAGAGAGTTAATTTTTAA
GTGTAATCAAGGCATGGTGGCCAATTATTTTTGGAGGTGGACTGTTACTC
CTGTTGATTGCCATATTGTCCGATGTCTACAAGAGTTATGGTTACCGTAA
AAGATCAACAAGCCGCAACGTTCCAGTTTACGAATCACCAACAGATAGAG
CTATTAATTAGAGAATAGAACGCACCATGGGTCATGCCATAATTGCTGCA
TTGTCCGAAACAGATAGTAAAGCGACAGAGGAGCGTGCGATTGCTCGTGG
TGGTTGGATTCCCACTTATGATCGTCGTCAAGATGTCGTTTCAGTAGCAA
CCAACCCATATCAAAACTTGTCGCTCTATGCTGCGATACCAAACCATATG
CCTCGAAGAAGGCGAAGTCTCGTAAGATCTAAATCTTGTTAGCGAATCTC
T Coding sequence (CDS) from alignment at sc0000063_pilon:1638884..1645134+ >XLOC_030899 ID=XLOC_030899|Name=XLOC_030899|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3336bp|location=Sequence derived from alignment at sc0000063_pilon:1638884..1645134+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAATTACACCTTCTTTTTCTACCGACCACtaaaAAGAATTACACCTTC
TTTTTCTACCGACCACtaaaACCTACTAAGTATTGTAGGCCTTACGTTGG
TAGCAAACTTGATTGGTCCACGGTCATGATATATTACGAGCATGAGTATA
GGAAGGAAGCATTCAGGGAGCTTGGGAATTTTACTGCAAGACGTCTTGAG
AATTACGTGATAATTCCTGAAATAGGTGTGGCAGGGCATGTCTCGCGAAT
TTATGACCTTTCCAATGAAACTCCGTTCAAGGCGTTTCCTGCTGGTGAAA
TTCCAATACTGTATCAGTTAGATAATGGGTATGTTGTTTTCGAGTTTGGA
GATGGCATTACTGCAAGAGAGGTCGATGAATTTCCAGAATTATGGAGATT
TTCAGAGGAAAGTTCGGCACTCGGAACTGTACCGATCATTGAAGGACATT
TGGTGAGCCAGATGTTGAACCTAAAGTTAGCTTCTACAAATGAGAATGAG
CAGATTTGTGAGCTACAAGCTGAGCAGGAAAAACTGTACACAAGGATTCT
TCAACATTTCCCCTCAACGGCAAACTTATGGGTCAAACGTGGAAGAAATG
TGGTAGCAAAACCACTGGGTGATGCTATGGTATTAAAGGAATGTGATCTT
GTCCAGAATTTTACAACAGTTTGGTCACGTCGAGTAAATAAAACGTGCTA
CTTACATTGTGCTTTGCAACGTCCCGGCTCCTAAGAAATTGAAGGGTTTA
TGGACTTGACTAACAGGCAGGGGCTGACGTCGAGTCCGAAAATTCGATGT
TCGGAGCGAAACAACCTTACCTATAGTGTCGACGATCTCGAGGGAACATT
CAAGGTCGATGCGCTTGGAAATACTGAAAGGGTTTCCCAACCACTGAATT
CTCTCTATGATACTTATAGTTTCCAAGAAATAAAAGACATTGTTGGAGAC
CATCTAAACATCATTCTGAAAGAAAGGCCAAGCTTTCCCCCTGTTGTCAT
ACAGGATATTGTCACCAAATCATACGAGGTAATGAACGAAATTGGATGGG
CATATGAGGACGTAAAGCCTAAAGACAAGCACCAAGTTGGAATTTTTGCT
GCCGTCGCCCATGAACTGGGAGAGATTTTGTCTAGCTTCGGTCCTTCCAG
AGTTATCTCGTCCTTGGATGACGCCATAAAGGGAACAGTGGAAGGTGTAG
GACACGCTGGTTCAGACTTGGTTGAAGCAATAGGAAACGCAGTGTCTGAG
ACCATCGATTCAACTGGAAGCGCGGCGAATCAAGTTGAAAGTTGATTCGC
AGAAGTGATCAAGGCATGGTGGTCCATTATTCTTGAAGGTGGACTTTTGG
TCTTGTTGATTGCCATATTGGCCGTTATCTACAAGACTTATGGTCACCGT
AAGAATTCGACAACCATCAGTGCCCCGAACCTACTAAGTATTGTAGGCCT
TACGTTGGTAGCAAACTTGATTGGTCCACGGTCATGATATATTACGAGCA
TGAGTATAGGAAGGAAGCATTCAGGGAGCTTGGGAATTTTACTGCAAGAC
GTCTTGAGAATTACGTGATAATTCCTGAAATAGGTGTGGCAGGGCATGTC
TCGCGAATTTATGACCTTTCCAATGAAACTCCGTTCAAGGCGTTTCCTGC
TGGTGAAATTCCAATACTGTATCAGTTAGATAATGGGTATGTTGTTTTCG
AGTTTGGAGATGGCATTACTGCAAGAGAGGTCGATGAATTTCCAGAATTA
TGGAGATTTTCAGAGGAAAGTTCGGCACTCGGAACTGTACCGATCATTGA
AGGACATTTGGTGAGCCAGATGTTGAACCTAAAGTTAGCTTCTACAAATG
AGAATGAGCAGATTTGTGAGCTACAAGCTGAGCAGGAAAAACTGTACACA
AGGATTCTTCAACATTTCCCCTCAACGGCAAACTTATGGGTCAAACGTGG
AAGAAATGTGGTAGCAAAACCACTGGGTGATGCTATGGTATTAAAGGAAT
GTGATCTTGTCCAGAATTTTACAACAGTTTGGTCACGTCGAGTAAATAAA
ACGTGCTACTTACATTGTGCTTTGCAACGTCCCGGCTCCTAAGAAATTGA
AGGGTTTATGGACTTGACTAACAGGCAGGGGCTGACGTCGAGTCCGAAAA
TTCGATGTTCGGAGCGAAACAACCTTACCTATAGTGTCGACGATCTCGAG
GGAACATTCAAGGTCGATGCGCTTGGAAATACTGAAAGGGTTTCCCAACC
ACTGAATTCTCTCTATGATACTTATAGTTTCCAAGAAATAAAAGACATTG
TTGGAGACCATCTAAACATCATTCTGAAAGAAAGGCCAAGCTTTCCCCCT
GTTGTCATACAGGATATTGTCACCAAATCATACGAGGTAATGAACGAAAT
TGGATGGGCATATGAGGACGTAAAGCCTAAAGACAAGCACCAAGTTGGAA
TTTTTGCTGCCGTCGCCCATGAACTGGGAGAGATTTTGTCTAGCTTCGGT
CCTTCCAGAGTTATCTCGTCCTTGGATGACGCCATAAAGGGAACAGTGGA
AGGTGTAGGACACGCTGGTTCAGACTTGGTTGAAGCAATAGGAAACGCAG
TGTCTGAGACCATCGATTCAACTGGAAGCGCGGCGAATCAAGTTGAAAGT
TGATTCGCAGAAGTGATCAAGGCATGGTGGTCCATTATTCTTGAAGGTGG
ACTTTTGGTCTTGTTGATTGCCATATTGGCCGTTATCTACAAGACTTATG
GTCACCGTAAGAATTCGACAACCATCAGTGCCCCGATTTACGAATCACCA
ACAGATAGAGCTATTAATTAGAGAATAGAACGCACCATGGGTCATGCCAT
AATTGCTGCATTGTCCGAAACAGATAGTAAAGCGACAGAGGAGCGTGCGA
TTGCTCGTGGTGGTTGGATTCCCACTTATGATCGTCGTCAAGATGTCGTT
TCAGTAGCAACCAACCCATATCAAAACTTGTCGCTCTATGCTGCGATACC
AAACCATATGCCTCGAAGAAGGCGAAGTCTCGTAAGATCTAAATCTTGTT
AGCGAATCTCTTTTACGAATCACCAACAGATAGAGCTATTAATTAGAGAA
TAGAACGCACCATGGGTCATGCCATAATTGCTGCATTGTCCGAAACAGAT
AGTAAAGCGACAGAGGAGCGTGCGATTGCTCGTGGTGGTTGGATTCCCAC
TTATGATCGTCGTCAAGATGTCGTTTCAGTAGCAACCAACCCATATCAAA
ACTTGTCGCTCTATGCTGCGATACCAAACCATATGCCTCGAAGAAGGCGA
AGTCTCGTAAGATCTAAATCTTGTTAGCGAATCTCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:1638884..1645134 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1606-1656:6201 |
| Aaloc | 1396-1605:5979 |
| Aaloc | 37-1392:403 |
| Aaloc | 1-33:1 |
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