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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1209111..1217163+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030576 ID=XLOC_030576|Name=XLOC_030576|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8053bp|location=Sequence derived from alignment at sc0000043_pilon:1209111..1217163+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGACAGACAAAATACAGGTTGTGCTTtgaaggtttgaaatttttgaa
gaaaagaatttcTCTTCTTTAAAAtagcaataaatttttttggattgGCA
GATTTTGAGGTAAGGTCGGTTGGGTGATGGCAATAAGTCCAGCCTGAAAA
GTGCTTAGTAATCTAGGGACTATGAAATTTCGCTGTTCACTGattatgaa
aaattttgtggttcacctattttgaaaaatttcgcagGAAGTTAACTTTG
CAGACTGCCGATTTTGTAAATCTCTGTGAGAACTTTGGGAATTTTCTTgc
tgcaaaaatttcttcccttaaggtaacacAACTGTTATGAGTCATTGTTA
CCAATAAAGGTACTTAGATATCTTGATAAAGGAAGCAAGCAAATTGCACA
GGAAGAATCTTGCTCAAAATGCTATTTCCATCACAAGACTtgattttcat
tatttatttttccGTAGGATTGTACAAGTTTTCCTGAGTTATTGTGAAAT
TTCATCGTTCCTGATTTGAACCTTCATCCTTTAAGGTACCttctttactt
tactttttttcgttaaaaaatatttttagtaaaGGTCAGAGCAGGTCAGG
GATGTTTTATGAACTAATCTAATCCACACctatttttaactgaagttttT
AAGCTATTTACCCCATTATTCTCAGGTACCTAGCAGGCAGACCACCCTAA
CTTGTTAATTTAAGATTCTTAAGACCTTATAAGCTAGTTTGTTTGATAAT
aagcatgtttttatttttttttatttttcagatataCTCTTTGTATCATT
GACACCAATAGATTTTGAATTATACCTTATCCAACATTTAGGAGGTGAGT
CAATGGATCTTCTTCATTGAAATGTCATCACTCAATgactacagattttt
ttgattttttctttaaattggTATGTACACTCCTTGATAGTAGGGGCAGT
AACTTTAGTAATTATGGGTACTGAAGAACTAATTCTTAAAATTTAGGTGG
TGGTACGaaaaaaaTGGTCCTTACTTACGTCTGAAACTGGCCCACTTACT
CCCCAAccatgaaaatttttcttaatgaTCTTAAGGGTTAAATAATAACA
TGTTTTTGTCTTCTATTTTTAGTTTCTCTCTACATCTTTGACACCAATTG
AGTTATCCCTTATCCATCAAGTTAGAAAGGTGAGacaattttgttgattt
tggttcaatcaattttcttctttaaatgaCAGGTGCTGtaacttgaatat
ttttattttgtcttaCTTCAAAAGTGGCTATTCTCTTCAACACATTTTGT
AATatcaattcaagacagccttaagCTGCCTTAAGTCCATTTCATTTTGA
GATAATCGACTTTAATAAAGAAGGTTTCATTTGCTgataaaactttgaaa
caatgCCAGGAGTCCCTTCTTTTGCTATTATGGGAGTATCGTGAATATCT
TTTTGTGgatgaaaagacattttaaatAGCTTACTCTAGAGGCTCTAAAA
TGGCATTTATTGGACTTGTTAAGGTCGTATTGCATTTAACTGAAAATCTT
TATACTAAGCAAGTTTCGAGATAAAATTGAGCCTTAAACTGCCTTAAGTC
CATCGTCCAatgtgttggacttaaggctacacAATTTAGTTGTGATGCTT
CATGAAGGCTTTCTAAGACTTTTTTGCCCTACAATTCAGGATGCCAACTT
TTCTGATAGGGGTTATTgtcttaagtcaattttcgaaaaaatgggcTTAA
GTCTATCTTGAATTGATACGGCGATTTATTTATATATAATTTAAAGGAAT
ctttgttttggtgttattTTACTTGGAATTTTAAATAAACTCGTTATACG
TTATACAATCTAAGATTTTACTAGCTCTTGAACTGCTTTTTAGCATTCAA
AGAACCTCAAAATGACATGAGTGACAAGAGAAATAGAGAAAGGTGAATAC
TTTGTTTAAAAGCAATGAGCATTTCTACGATAATGAAGGTCTTATTCTCC
TGGATTGGGTCTAAGATAAAAGTTTATTGGTTTTCTTTGAAAGTTCGAGA
AACCTTTTAGAAAGCGTGGGCATCAAGGCTTTTTACCGACCAATGTATGA
AAATTAGAGTTGTATCTATTAAAAAATGTCACTGATAGCGGCATTTTGAG
ACGATTTTGAATTTCCAGGAGAGgcaggggggggtcagtactaaaatgtc
agacatatatgagtactaaaaggattttcaagaatttcttacataccacc
acctatttttcgaaaatgttattttagtacacatgtactaagattatttt
gagcaatttaacatagataccacccattttttgcccttttatgAGTTTAA
ATTGGGGTaattgttacaaacctagtcgaaatttggtattttagtacaca
tggtactaaaattatttttgagcttttttgcagtaccaccacgtcactaa
atgtcatgatgtctgaaattttagtaccgaccccccccccctgggagaGG
ATGCTTTCAAATTATAGTTAATCTTCAGAACAATCTTTTATAAGAGCTTT
TCACTATGGTTGTGATTCATAGTATTGTCGCTTTTAGCTTCTTAGAGACT
AAATAGTAACAAAATTGATCATTGCAAACCTAGAAATCTTGCTATTTTCA
ATTCTTATCAAACTTTGGAAGTAAGAAATTTGTTTCAgcgctatatttca
acaatgtTGATTGACTGTTCTAGTAGATTTTTAGTTAATACAGAGCTTAG
AATAcgaactttcaaattttaaggttGAAATCTTGGAGAGATAGAAGAAG
AGGTGTTCAGGCTATCTCAAACGCCATTAATGATTATGGAGGTCATTCTG
ATTTCGACTCATCTGCTGTCAAGTCAACAGGCGTGGCTGTGGATAATGAT
GTTGACATGAGTGATAATGACTCTCAGATAGTAGATAGCGTGTCCCCTGA
TGATGGTGATAACGAGATGTTGGGCTCCCCTGCAGTTTTTGCTGGAGCTT
GTGCACAGTCTACAGAATCTTCATCCTCTTCGTCGGAAGCTTCCTCTATT
TCCCTGGAGTCAGATTTGGAATGTCTAAATGATGAAATTGATGGTGTTTT
GTGTGAGAAATTGAAGACATGGGCACTAAAAAACCACTGCACAAGGGTTT
GTGTAAATGAAGTTTTGAGCATTGTTGGCAATCTTGGTTGTAAAGTGCCT
AAAGATAAAAGAACACTTCTAAATACGCAAAGAACAATTGTTCAAACCCC
TATGGGTCTTGGACATTACATTTATATTGGTGTTGAGAATAGAGTCACTA
AACTGTTGGCATATGACAGTAATTTGGATTCTATAACTCTGTTCGTAAAC
ATGGACGGTCTtcctctttttaaatcaagcacAATCAACTTATGGCCTAT
TCTAATTCAGTTCCACACTTTTAAACCGATTTCTGTTGCttttttttGTG
GCAAATCCAAACCTCCTTTTAACGAGTTTATGcatgattttgttgttgag
atgAGGCATTTGATTAACAATGGTATGACGTTCAACCATGTTCATTATCG
CGtatctttgttttgtttaacATCTGATGCACCAGCACGGTCTGCCATGA
AAGGTATTATTCAACATACCGGTTATCTGCCCTGCGAAAGATGTGATATC
AAAGGCGTGCATGTCAAAAACAGAATAGTCTTTGATAGAGATCAAGCAGA
AGCCAATGGTGAACGGACTGATGAATTATTTCGCATGAATTTATACGCCA
TACCTGATGAGGATGGAAAGCGTCATCAAATTGCCATCTCTGAACTGACT
GACTTACCTATTGATATGATCAAAGATATAGCTCTTGACCCTATGCACTT
GATATTTCTCGGTGTCACCAGGCGGCTGTTGTATTACATCAAAGGATCCT
TCCGAAAAATCAAAGCTGGAAAGCTGTCTACCGGTTACTTGAACGGTATT
TCTGCTGCTTTAAATGCCTTTAAATTACCGACTGAATTTGCTCGTAAAGC
AAGAACGCTGGCCGAGCTAGACAGATGGAAAGCTACTGAACTGAAGTCAT
TTTTGCTGTACACTGGATTAGTAGTTTTGCGACCCTATCTTTCCTCTCCT
ACTTTCAAGCACTTTCTTAGCTTTTCCATCGCTATCCGATTGCTCAGTGA
AGAAAATGGTGTTatcagaaatcaaaacattggaGCAGCTCGAGGTCTTT
TAAAGTATTTCGTTGACAATTGTCATGTTTTTTACGGTGAAACATTTTGT
GTTTATAACGTACATAACGTGAAACACCTCCCAGATGACGTGGTTAGATT
TCAGTTACccttaatgaaattttcatgtttcCAGTTCGAAAACCATCTCC
AAAAAATCAAACGTCTTGTTAGGGGAAAAAATAATCCACTCAGTCAAATT
GTTAAAAGATGTGATGAGCTAGATGGAAGTTACTATCTTACCAAACCACT
TGAATTGAAATATAATCCGAATGGCAAAGACTCTTGGTTCATTGCATTTG
ATCTAATAGTTCAGTTGAAGGAAATAGGAAACAATGGAACATTTTGGTGT
GATACTTATAAACCTGCTAACCTGTCGTCATACTTCAATGCTTTCAACAT
CGATTCGAAAGAACTTGGAATATACCTATTGAAAGAGAACCTGAAACCAT
CTCGCGCAAACTTTAAAAGGGAACAGTTACAAAAGAAATGTGTTTGTTTA
CCATATAAGAACGACTTTGTTATTATTTCAATGTTATAGTCCGTGGTAAA
TGGCCCCAAagcgtttcactttttttgtggtaaaaagatctttaattttg
cataatttatACAGAATTTGGGGAAATTTCCCTCtttttttACCATAACA
ACGCCCATAACTTCTGATCTACAAAAGTTGGAAAATTGTTgtagtatatt
tttttgttcagtttgaagagctttaTCCCGTTATAATacaggtctttttt
gattttgaagttcccccaaaaatgattttaatttcatttctgaGGCTTCA
GAAATCCAAGGGCCATGGCCTATTATTATAGGTCTTGATCTTtagaggtt
ctataaattacctataataaaaattcatttttcttttccattttatcTTG
TGTTTATTAAATATAAATATATCTAGtcatttcaagatttttcaagactt
tttatCAAGTATTTGCACTAAAAAACCATTACTATTCTTAATTGCCCAAT
TTTAACCTTATGAAGCTCATTTTAAGTAATTCTTGTTAagaatttccaga
aaaatcGAATCGAATCGAATGAATATAGGTCCTCCCTTTTTGGCTGAGGG
TAGGAAGCTAGAGATCTACAGCCaaagttttgcttttctttgaGCCTGAG
AAAAAAGGGACCCTTCAAAGACgtcttctgtttttttttaattattacta
attttttatcatttttagcaAAATGTCATATGCTTTGTTcaagtattttg
aaaaaaatggtcaGCACCGGGAGTGCGTTGCGCCAACACAATGGATAAAA
GAAAGCAAACTTTACTGGCCAAAATATGCTGCTCGTCAATTGGCTTTAGA
AATGGCACCCTTAGACGAAACTTGGCCCTCTTATCCCATACACGAGATAA
AGAAATATCACGGTATTGATACAATTCCCTTTTCTCTGTTTTGAAAAAGA
TCTTTGGAACTCTCGTGTTCGGTGCATTCTTCCGCCTCTTTTATAACCTC
TTAAAATAATGTGATTTTTCTTTCAACAgccatttttaaatttaaacgTT
TGATTTATTTTCCAGACGACTACAATTATCTTAATGACTGCTGCTATACC
ACCACCGAAGATGAGAGtccagtcaaaaaaaaaaccgaTGGTCAGTATAT
ATTAAAACATAGTTCAAGTATCAAGTTTCGTACATTTGCCCTTGTGCATT
TGTATTGTTTCTGAAAAATCATGATGGTTAGTAATAATTAATGTCGATTT
GCGTATTTCTTTTGGTTTAGAATCACCGAAAAGAGCTTCAAGCccaaatt
tcaatatttcaggCAGCTACGCCAATTCGTTTAGCAGGCCGACCCTACCT
GGCGCTTGTAGAACGCAATCTCAGGTGCAGTCACCTACAGTTTCAATGAA
AAGTAAGTTTAACCAGAATATTTAGAATATGGACCCTTCTCCTGTttagt
aattttcaaaaaaaattttagctGTTAAAAGGAAAGTCCTctctttattt
tgctttaaattgtcttttaaatcatttttaccATAGGAAAAAGAGACGAT
ACTATCGTTCGCTCCAGTTTTTCTCCGGCAGCCACATGCACCGAAAGTAA
TAGCTTTATACCACTGGCGTCAATAATAAACGCAGGtattttttattcga
aaattttaCTATAGGTACTATCCAATCTTTTCGCATCTTTTACTCAGATT
GCACTATTTCATTACTCCAGACAATTCTTGTTTTTTGACGGTATTTTCAG
CTGATAATAACTTATTTTGGCTTTCAGATAACAGTTTCAATCCAGACGAC
TGTATATCTCCATATGACCTTCTCGGCAAATCTGGATCAGGTATGTTAGT
CACCTTAGTTAGTCAGTGATTATTCCGAGTAAAAAATCGATCAAATAATA
TCACTAAACCGGATTAAACAATTTTCGAagaatgtttataaaaaaatatc
catTTTAATGGCGATGGAGTAATACTTGAatttttctctgcttattattc
tttacattcttttatttatttttattcagcatacatttacatatttttca
tAGCTTCTCACTCACAGTCACCACGACAATCGCCGAACTGTGCACGAAAT
AATGgcgctatgaaaaaaaaacgtaaaaaaaatatatttttttttattag
caaTTTCAGTACCGAATATTTTCAAAGCAGCCCTGTTCAGAAAGCTCGAG
CTTATcctagtttgttttttttttacttttagatgCAAACTTCATTGTTC
CTGAAACCAATGATCAACGACCTTGtaagtcttttttaaattaagcacag
atgatttttttgtttttttcttgtgaGTGAAGAATTCTTTTGCCTTGATC
AATGCttcctgatttttttttactttctggGAAGGACTTGACAGATATTT
TGTTGAGATAGAGAAACATACTAtactatttttttaatttctttttgcaG
CGACACAGAAAAAATGCCACTCAAAATATGGAGATGGCGGAAAGGACTTC
AAAGAAATGTCGAATAAACGTAAGTTTTCAAGCTCAATATTACATTCTTG
TTTTGTACAAAGAAataaagtccattcgctttgAGTATGCACACGTTTTT
TCTACAACGTGGGAAACAATCTCAAAGGAAGTAAGTCTAATTACGATGAC
ACGGTTTCTACATGGTAGCTAAAAcgagtgcacacttaaagcgaatgtaC
TCTAGTTTGGTTGGATTTACATAAAAGCAAGAGTATAGAGTATAGTCATT
CATGCGGGCTCCAGACATTCGGTAAGAAAATGAGCAAGAGTGTAACCCAC
CCTTTGTTTCCATATCACATCAGACTaattattacacttttttttcagaa
tatcaATATTCCGTCATGATGGAGTTGCAAGTTTTGAAACGAAATCAAAA
CAGAATTCTCGCCATCCTGGAAAACCAAGAAACAAGCCCTTCAGAACAGA
CACTTGAGCCACCAGAACCATTGGATACGATGGAAGAATTCGATATCGAG
GAAGAAAAACTCAAAACACACGATAAGAGAGTGATAAAGGTAAAAATAAT
CAATACTTTTTATATACCTTTTCAATACCTCGATCTTCTTTTTACCCGAC
AACTTCACGTTTCACAGTAGGCCCtcgtgaaatttttttatttcttgtgA
AAATATATAGTAATTAAtgtattattttgaattttatcttGTAGCGAAAA
ATGATCAAGCAAATAGGTGGCAAAGACATCCGTCAAGCAATCCGCTTAGC
ACTCGACAGCATGATGTCGAGAAGACTACAAAGCAAGTTTTCAAAGTCGG
GcttgcagaaaaaaagaaaatttaaaggcACTTATCATTATAAATGCTTA
GAG Coding sequence (CDS) from alignment at sc0000043_pilon:1209111..1217163+ >XLOC_030576 ID=XLOC_030576|Name=XLOC_030576|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000043_pilon:1209111..1217163+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGACAGACAAAATACAGGTTGTGCTTtgaagATGAGACAGACAAAAT
ACAGGTTGTGCTTtgaagCTTCTCACTCACAGTCACCACGACAATCGCCG
AACTGTGCACGAAATAATGgcgctatgaaaaaaaaacCTTCTCACTCACA
GTCACCACGACAATCGCCGAACTGTGCACGAAATAATGgcgctatgaaaa
aaaaacatgCAAACTTCATTGTTCCTGAAACCAATGATCAACGACCTTat
gCAAACTTCATTGTTCCTGAAACCAATGATCAACGACCTTCGACACAGAA
AAAATGCCACTCAAAATATGGAGATGGCGGAAAGGACTTCAAAGAAATGT
CGAATAAACCGACACAGAAAAAATGCCACTCAAAATATGGAGATGGCGGA
AAGGACTTCAAAGAAATGTCGAATAAACaatatcaATATTCCGTCATGAT
GGAGTTGCAAGTTTTGAAACGAAATCAAAACAGAATTCTCGCCATCCTGG
AAAACCAAGAAACAAGCCCTTCAGAACAGACACTTGAGCCACCAGAACCA
TTGGATACGATGGAAGAATTCGATATCGAGGAAGAAAAACTCAAAACACA
CGATAAGAGAGTGATAAAGaatatcaATATTCCGTCATGATGGAGTTGCA
AGTTTTGAAACGAAATCAAAACAGAATTCTCGCCATCCTGGAAAACCAAG
AAACAAGCCCTTCAGAACAGACACTTGAGCCACCAGAACCATTGGATACG
ATGGAAGAATTCGATATCGAGGAAGAAAAACTCAAAACACACGATAAGAG
AGTGATAAAGCGAAAAATGATCAAGCAAATAGGTGGCAAAGACATCCGTC
AAGCAATCCGCTTAGCACTCGACAGCATGATGTCGAGAAGACTACAAAGC
AAGTTTTCAAAGTCGGGcttgcagaaaaaaagaaaatttaaaggcACTTA
TCATTATAAATGCTTAGAGCGAAAAATGATCAAGCAAATAGGTGGCAAAG
ACATCCGTCAAGCAATCCGCTTAGCACTCGACAGCATGATGTCGAGAAGA
CTACAAAGCAAGTTTTCAAAGTCGGGcttgcagaaaaaaagaaaatttaa
aggcACTTATCATTATAAATGCTTAGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1209111..1217163 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 406-564:7895 |
| Aaloc | 217-405:7551 |
| Aaloc | 148-213:7153 |
| Aaloc | 106-144:6935 |
| Aaloc | 37-102:6756 |
| Aaloc | 1-33:1 |
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