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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000370_pilon:23761..27113- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030468 ID=XLOC_030468|Name=XLOC_030468|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3353bp|location=Sequence derived from alignment at sc0000370_pilon:23761..27113- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCTCGATTCAGAAAAAGGACTCAAAAACTTGTGCAACTATGCTTT
ATCTTCAAAATGTAGCAGTATCTACCCATATCAAAAGATGCAAGAAATGT
TTGTTAAGAACGATGGAGACTTTGTGAGCATTTATTTGAGAAAATTAAAT
ACAAAAGATCAGAAAAAGGGTGATCTTGTCAATCCCAGATGTTGTGAAAA
AGTTATTTCAACTTTGGAGGACTGTGCTGTTGATGATGTTTGTAAGGCAG
TTATCATCAATGGCATAGAGGAGTACTTTGCATCAAGCAGTATATTTGAG
AAATTGTTGAAGAAAACACCAGCACTAGAAGGAAAGAAATATGAAGAGGA
TGTATCAATGTTGAGGTATGTATCATTCTTTAATAATGTCCTTTGCCTTT
AATTAAAAAAGAGTGGTCAAATGCTATTGACTCTGGCCCTGCTAATTTTT
AGATTTGAGATTACTTTAGGCATACAAACTTTCGCAAGGACAAAAAATCG
CAAAATTTACGACACTTACTTTCGCAAATTTAACGGAAAAATAATTTTTT
CAAGCATTAACTTTCGCAAATCAAGACTTAAAATTGAATATTTTCACATG
AAAAAATGGCTTAGAGGCACGAATACTTCTGGTATTGGCTTGAAACATTG
GTCCTTTGACTTATTAGTCTTTTAGCAAGCAGGCTAAAAAGTTCCCTAAA
AGTTACATTTTATTCAAAGGTTGAAGTTTTACAGATTTTCTATTTTGTCA
AGAATTTTTCGCGAATATAAACTTTCGCAAATGGCCCTTCCTAGAATTTT
TAAAGACATTTATTTTCGCAAAACAGGTCGAAATTCACGAAAATGGCAAA
AGTTTCTGCTTGCGAAAGTTTCTGTCTAAATTAGTACATATAAGAATTTT
AAAATTTGATCAATTTTGTTGTAGCTTTGAAGACTGCACATTTTTTTCCA
TTTCATTATCATATTTTTGGTGTAGACACAAAATTTGGACACATGGTATC
TCGAAATACTTTACTGTGGTTTCGAGAAATAATTTCTCTTCAATTTTTAT
TAATCTTCATTCTATTCAAATTTTCTTTTTGCAATGGCTTAGTTGTCTTG
TAGTGTTTTCTGAATATCCTCCTTCTTGACCTTAGTATAGAGGCTACTGT
TCTTTCTTTTAACTTCTTTGGTATTTTTGGTTCTCTTCTGAAAACTTAGT
TGTGAAAAAGGATGAATATAGATTTCACAGCCAGGGTTGTTATTTTATAA
AAGCAAATAAAAACTGAGAGAGGTTTTGTCTCTTTGACTCATCCATGCTT
GAATTCTTTTCAAGGGAGAGACATATTATTGAAATTTGTAGGTTCAAGGT
CCTACTTTCTCTCTACTTGAGTAATCTATTCACATTTTTTTCACATTTTT
ACAGAACTTTTTTCATTTCTTTTTATGATTTTTCTCTTCTTAGTTAGAGA
GGGATGAAATCTATAAGTCTTTCATTGCTTTCAAAGAAAGGTGCAAGTTT
TAACTCTCTTTTACAGTAAGGAGCAATGTTTACGTTGTATTATAAAACCT
TTAAGTTGAAAAAAAGAATTGCAAGCTGACTATTTTTTGTTTTGATTAGA
AAGGGCTGTTATCGAAAAATGAATGAGAGAGCCTTGATTACTTGATTAGT
GTCGAGTTACCATTTCCTCTTTTTACAGTCATACTTCATGCCTCACTATT
TGAAATTTCTCATCCATTGTTGATTTTAATGACCTATATTTATTACGAAA
AAGTTGGTAGTTATAAGCAGTTAATTACATTTATCATTTCATATCTATTT
GAATTGAATGTCCATTCAAAAGAATGTTCTGTGTATTACTATATGGAACG
ATTATATCTGAAGTGTGTGCGAAAGCTCTCTCATTTTATTATGTATTGAT
TTTACAGCTTTTATTTGAAATGTATATTATGGATTTGTGAATCATGTCTT
GCTAGCTCAAGTTCTCTCTTGTTTTTTCCTCCCAATGAGAACTTTTATGG
TTCTAACTTTATTCTCATCATGGTCTATTCGTTGCAAATCGAAAGTGAAA
GTCAGTCGCTTGAAAACGAAAGTAAACAACGCAATCGCGTCAAACAAAAT
CATTCCGAGAAAAAGTTGCGAGTCAGATCTAAGACGGAAGTTATACATTT
TTTTGTTTGGATTATTTTTACAGGTATTTGATTCAAACGATCCGGAACTT
CAACAAACCCATCGTAGCCGTTATACGTAAGACAGCGATTGGATTCCCTG
CTTCGCTTCTCTCTTTATTTGATATGGTTTTTCACGAGGTAAAGATTTTT
TTATGATAACGTTTTTATCAATCATTCCAAAATCAGCTGATAATACTAAA
ATTTTTATATAATTCCTCTTTTCACTCCAAGTATAAACATTGGAAGTATT
AAGGGGATTTTTCTCTTTTCGTGTATTTTAATTCGTCGTTAAAATATTGT
AGTTGTTATGACGATTCACTTTTTTGAATGATTGTAATTAAATGACCAAG
CACGTTATTGCAAGATGTCTATTCTAATGACCGCATTGTTATTTCAAACG
ACCCCATTTAGTGTAATGACCCTTGAGATTTATGAAGCCGGAAAATCTTG
TCATAGAGAGAGTGTATTTGCACGTGGTACTCATCAAATGTTTATTTTCT
GAAAGGTTTTTGGTATCAGGATTTTCGACGCACGCCGTCTTTTTCTATGA
CGGTAAACTGGTAATCCACGCTAAGTATTTGTATTGTTAATATTAATACT
TTTAAATCCTTTATTATGGCATGTTAAAAGTAAAGCATTTTCCTCTACTT
TTATTTCGAACAGCGAGAAACAGAGAAAGCTTCACACACCAGCAAACAAT
CAAACGTAGGAAGGAAGAAAACGTTGAACAAGCAACCTTCGGAAGATGTC
GAGGATAGCGAGGTATCGTGCCCTAGTACAGAAACAGAATGCCAATCTTT
TGTGTTTCCAAGGTTGATGGGCTTGACTCAGAATAACGAAAGTCGAATCA
TGGGTGAGGACACACGGCTTCTTTCGCCTACAGATTGTACGGAAAACGTC
GATTGTTTGAATGAAGCGCCGTTATCGCAACAACTTCGAAATAGCCTTCG
TCACATGCGCTCCAATAGTAAGATACAAATTAAACGACGTGGTAGGTCCC
AGTCGGAGATCTCAGAGCCAGCTAATGATGAGGAATCAGGCGATGAGGAG
GAGGAGGAGGTTGATGACGTAATGTTACCGGCACGTCAATCTAATCATTT
GGAACAGTTAGAACGATTGGAGAGGGAAATTCTACAAGAGAAAGAAAGAA
CTGAAAAGTATATGAGCGAGCTTTTCTCTTATATGAATTCACTAGACGAA
TGA Coding sequence (CDS) from alignment at sc0000370_pilon:23761..27113- >XLOC_030468 ID=XLOC_030468|Name=XLOC_030468|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2040bp|location=Sequence derived from alignment at sc0000370_pilon:23761..27113- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCTCGATTCAGAAAAAGGACTCAAAAACTTGTGCAACTATGCTTT
ATCTTCAAAATGTAGCAGTATCTACCCATATCAAAAGATGCAAGAAATGT
TTGTTAAGAACGATGGAGACTTTGTGAGCATTTATTTGAGAAAATTAAAT
ACAAAAGATCAGAAAAAGGGTGATCTTGTCAATCCCAGATGTTGTGAAAA
AGTTATTTCAACTTTGGAGGACTGTGCTGTTGATGATGTTTGTAAGGCAG
TTATCATCAATGGCATAGAGGAGTACTTTGCATCAAGCAGTATATTTGAG
AAATTGTTGAAGAAAACACCAGCACTAGAAGGAAAGAAATATGAAGAGGA
TGTATCAATGTTGAGATGAGTCTCGATTCAGAAAAAGGACTCAAAAACTT
GTGCAACTATGCTTTATCTTCAAAATGTAGCAGTATCTACCCATATCAAA
AGATGCAAGAAATGTTTGTTAAGAACGATGGAGACTTTGTGAGCATTTAT
TTGAGAAAATTAAATACAAAAGATCAGAAAAAGGGTGATCTTGTCAATCC
CAGATGTTGTGAAAAAGTTATTTCAACTTTGGAGGACTGTGCTGTTGATG
ATGTTTGTAAGGCAGTTATCATCAATGGCATAGAGGAGTACTTTGCATCA
AGCAGTATATTTGAGAAATTGTTGAAGAAAACACCAGCACTAGAAGGAAA
GAAATATGAAGAGGATGTATCAATGTTGAGGTATTTGATTCAAACGATCC
GGAACTTCAACAAACCCATCGTAGCCGTTATACGTAAGACAGCGATTGGA
TTCCCTGCTTCGCTTCTCTCTTTATTTGATATGGTTTTTCACGAGGTATT
TGATTCAAACGATCCGGAACTTCAACAAACCCATCGTAGCCGTTATACGT
AAGACAGCGATTGGATTCCCTGCTTCGCTTCTCTCTTTATTTGATATGGT
TTTTCACGAGCGAGAAACAGAGAAAGCTTCACACACCAGCAAACAATCAA
ACGTAGGAAGGAAGAAAACGTTGAACAAGCAACCTTCGGAAGATGTCGAG
GATAGCGAGGTATCGTGCCCTAGTACAGAAACAGAATGCCAATCTTTTGT
GTTTCCAAGGTTGATGGGCTTGACTCAGAATAACGAAAGTCGAATCATGG
GTGAGGACACACGGCTTCTTTCGCCTACAGATTGTACGGAAAACGTCGAT
TGTTTGAATGAAGCGCCGTTATCGCAACAACTTCGAAATAGCCTTCGTCA
CATGCGCTCCAATAGTAAGATACAAATTAAACGACGTGGTAGGTCCCAGT
CGGAGATCTCAGAGCCAGCTAATGATGAGGAATCAGGCGATGAGGAGGAG
GAGGAGGTTGATGACGTAATGTTACCGGCACGTCAATCTAATCATTTGGA
ACAGTTAGAACGATTGGAGAGGGAAATTCTACAAGAGAAAGAAAGAACTG
AAAAGTATATGAGCGAGCTTTTCTCTTATATGAATTCACTAGACGAATGA
CGAGAAACAGAGAAAGCTTCACACACCAGCAAACAATCAAACGTAGGAAG
GAAGAAAACGTTGAACAAGCAACCTTCGGAAGATGTCGAGGATAGCGAGG
TATCGTGCCCTAGTACAGAAACAGAATGCCAATCTTTTGTGTTTCCAAGG
TTGATGGGCTTGACTCAGAATAACGAAAGTCGAATCATGGGTGAGGACAC
ACGGCTTCTTTCGCCTACAGATTGTACGGAAAACGTCGATTGTTTGAATG
AAGCGCCGTTATCGCAACAACTTCGAAATAGCCTTCGTCACATGCGCTCC
AATAGTAAGATACAAATTAAACGACGTGGTAGGTCCCAGTCGGAGATCTC
AGAGCCAGCTAATGATGAGGAATCAGGCGATGAGGAGGAGGAGGAGGTTG
ATGACGTAATGTTACCGGCACGTCAATCTAATCATTTGGAACAGTTAGAA
CGATTGGAGAGGGAAATTCTACAAGAGAAAGAAAGAACTGAAAAGTATAT
GAGCGAGCTTTTCTCTTATATGAATTCACTAGACGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000370_pilon | genome | sc0000370_pilon:23761..27113 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-1020:541 |
| Aaloc | 367-480:1180 |
| Aaloc | 1-363:3354 |
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