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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1611297..1613591- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030430 ID=XLOC_030430|Name=XLOC_030430|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2295bp|location=Sequence derived from alignment at sc0000043_pilon:1611297..1613591- (Clytia hemisphaerica_ch_hm2_pilon)
TCTCAAAAGCCCAATCAGTGTATCAAATACCTGCTAGAAGAAACAGACTT
AAAATCACCAGAACTAACTGAACATATTAACACTTTATTGAAAGTTTTTC
CTGTCAAATCATACCAAGGGGATTCTAAAGTCATTAATGGCACTGGTAAT
CTGTTGTTGAAAGCAGGAGATGTTCAGAAGAATATTTCATTTTTGAAACA
GATTTTCAAGTTTGTTGAGAAAAAAAAGAGAAAGAAAGACGTTTTCGTAT
TCCAAGAAGGGACGGAGAAGGTGATTGGAGAGTTGATGAAGTCCATTTCA
TGGGAATCAATTAGAGAGAGTGTTGAAAATGCTATCACCCTTACTGAACC
ATTGCAGTATAAATCCTGGATGGACGTCGCTTCTATTGCTGATAATAGTG
ATCTTGCCAATATCATTATAGAATTGAGTCATGCTCAACTATATGATGAT
TATATCGAAGTTTTGCTATGGGAGAAAATCTTTCATGAAGTTTGCAAGAG
CAAGTGTTTGAATGAACGTTGGTTCAAAACATTGTTGAATGATGAATCAA
TAAGGATTGACTTTGTCATTTCATCCAAATTTGCAATAGAAGCTATTAAA
AGTGAGAACAAAACACTTTATCCTTCCATCTCTACTCTTCTAAGAAATAC
CATTAAAAGTACTGAAGATCTCATTTACATTGATGAGGAAATATTGCCTG
GTGTTCTTCGAGATATATTTGAAGTGTTATTCAATTATTATGATCAATTT
TCAAGCGAATTAAAAGAGCTGGTTACATGTTTGCTTGACAAAAACTATCA
CTTCATGGTCGGAAAAGCTCTGCTCAAATTATCAGTGTTAAATTTTCCCA
ATCCAGAGGGTTTTGAGATGGTCTACGAGAAATCTTTGGACAGTTTCATA
ACGGAATGCGATGAAATTGAAGAAGAATTTGAAGATGAATTAATGGATGC
GATCAAAATCTTTATCCAAAGGAATATTGTGAATTCCACCTTGTTTATAA
AGTTATTCAAATTTGTGTGCAAAACGATGGGAGAATCTTGTATTAGTGAC
ATCATTATTAAGATAATGGAACAATGCTCAATATCAGAGAAAAACAGCTC
AATTGACTTTTTGGAACAATTGATTCAACATTACATTACTTTGATAAAGA
ATGATCGGTATGTTGATAGCGAAATGATGGCTTCTTTGTTAATTGTCTTA
TTGAAAACTAAAGAAGAGTCATTGTCAAAGTATTTGAAAGATTTGGTGGA
AAGCAAACCCATCAGTGAAAAGATTCTTGTTTCCCAAACTACACTCTCCT
CAATTTTTTCTGTCACAAACCAGAAGAGTTTCAGTGGCTTTACAGCAAGC
AAATATTTTCGAGTAATTCTCACAAGCTATGTCAACATCATCAATACTAA
ACCAACGAAATCGAATCAGCTACCAACTCCTGACACATATAAAAGTGTTT
TGATTTACTTAGTGACTAATTGTGATTGGCCATCATCTATTGAGCTTTTA
AGAATCTTACTTGATTCAGAATTCTACAAGAAAGATTTTGATATCAGTAT
GTTTTGTTTGTCGCAATTGAAATGTCGTAATACAGAACCTTATAAAATGT
TTCTCAAATCCACTGTTGATGCTTTGAATGCATATCTAAATGATGAAGAA
GATTCAAAGGATGTTCCAGATTTCATTTATCAACACATACTCAAATTTGT
GAGAATTTTGTTTAAAAATGATTGCTTCACTGATATTCTATTGTATTTGT
TGTCATCTGAAGCGTTCCAAGCAAATGGAAAAATTGATTCTGTAGCAATG
AAAGATTATAGTTCTCTCTTACAAAGGCTTATCTCTGATCTTAAGAGAGA
CTTTAATACTGACAAACCTTACGGTCAACTAATGTTGATAAGGGTACAAA
ACTTGGAATTCAAAAGCGTAAAGCCAAAACTCACCTGGAAACAACCAACA
TCCGACATCTTTCAAAATCATCTTTTGGTTAATGATTTCTTGAGAAGTGA
AAGAGACACTTTTATTTATCGAGATGCTTTTACTACAACTGAAGATGCAA
GAAGGTGGGTGCGATCTTATAGCTTTGACCGTATCTTTACAGCAGTCATC
AGAAATAATAATGGAGTTGTTGAAGTTCTTCTCCAAAAACATCAGGAACA
ATATGAAAAGGAGAAAAAATATTACTTCAAAAATATGGCTGAACTGCATA
GACTTAAAAGAAAACTGAAACTTCATTTTCCTGAGCTTTACATTCAACAT
AACAACAAGAGACTTTTACAAAATGATTGTTCTGGTGTACCCTGA Coding sequence (CDS) from alignment at sc0000043_pilon:1611297..1613591- >XLOC_030430 ID=XLOC_030430|Name=XLOC_030430|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4590bp|location=Sequence derived from alignment at sc0000043_pilon:1611297..1613591- (Clytia hemisphaerica_ch_hm2_pilon)
TCTCAAAAGCCCAATCAGTGTATCAAATACCTGCTAGAAGAAACAGACTT
AAAATCACCAGAACTAACTGAACATATTAACACTTTATTGAAAGTTTTTC
CTGTCAAATCATACCAAGGGGATTCTAAAGTCATTAATGGCACTGGTAAT
CTGTTGTTGAAAGCAGGAGATGTTCAGAAGAATATTTCATTTTTGAAACA
GATTTTCAAGTTTGTTGAGAAAAAAAAGAGAAAGAAAGACGTTTTCGTAT
TCCAAGAAGGGACGGAGAAGGTGATTGGAGAGTTGATGAAGTCCATTTCA
TGGGAATCAATTAGAGAGAGTGTTGAAAATGCTATCACCCTTACTGAACC
ATTGCAGTATAAATCCTGGATGGACGTCGCTTCTATTGCTGATAATAGTG
ATCTTGCCAATATCATTATAGAATTGAGTCATGCTCAACTATATGATGAT
TATATCGAAGTTTTGCTATGGGAGAAAATCTTTCATGAAGTTTGCAAGAG
CAAGTGTTTGAATGAACGTTGGTTCAAAACATTGTTGAATGATGAATCAA
TAAGGATTGACTTTGTCATTTCATCCAAATTTGCAATAGAAGCTATTAAA
AGTGAGAACAAAACACTTTATCCTTCCATCTCTACTCTTCTAAGAAATAC
CATTAAAAGTACTGAAGATCTCATTTACATTGATGAGGAAATATTGCCTG
GTGTTCTTCGAGATATATTTGAAGTGTTATTCAATTATTATGATCAATTT
TCAAGCGAATTAAAAGAGCTGGTTACATGTTTGCTTGACAAAAACTATCA
CTTCATGGTCGGAAAAGCTCTGCTCAAATTATCAGTGTTAAATTTTCCCA
ATCCAGAGGGTTTTGAGATGGTCTACGAGAAATCTTTGGACAGTTTCATA
ACGGAATGCGATGAAATTGAAGAAGAATTTGAAGATGAATTAATGGATGC
GATCAAAATCTTTATCCAAAGGAATATTGTGAATTCCACCTTGTTTATAA
AGTTATTCAAATTTGTGTGCAAAACGATGGGAGAATCTTGTATTAGTGAC
ATCATTATTAAGATAATGGAACAATGCTCAATATCAGAGAAAAACAGCTC
AATTGACTTTTTGGAACAATTGATTCAACATTACATTACTTTGATAAAGA
ATGATCGGTATGTTGATAGCGAAATGATGGCTTCTTTGTTAATTGTCTTA
TTGAAAACTAAAGAAGAGTCATTGTCAAAGTATTTGAAAGATTTGGTGGA
AAGCAAACCCATCAGTGAAAAGATTCTTGTTTCCCAAACTACACTCTCCT
CAATTTTTTCTGTCACAAACCAGAAGAGTTTCAGTGGCTTTACAGCAAGC
AAATATTTTCGAGTAATTCTCACAAGCTATGTCAACATCATCAATACTAA
ACCAACGAAATCGAATCAGCTACCAACTCCTGACACATATAAAAGTGTTT
TGATTTACTTAGTGACTAATTGTGATTGGCCATCATCTATTGAGCTTTTA
AGAATCTTACTTGATTCAGAATTCTACAAGAAAGATTTTGATATCAGTAT
GTTTTGTTTGTCGCAATTGAAATGTCGTAATACAGAACCTTATAAAATGT
TTCTCAAATCCACTGTTGATGCTTTGAATGCATATCTAAATGATGAAGAA
GATTCAAAGGATGTTCCAGATTTCATTTATCAACACATACTCAAATTTGT
GAGAATTTTGTTTAAAAATGATTGCTTCACTGATATTCTATTGTATTTGT
TGTCATCTGAAGCGTTCCAAGCAAATGGAAAAATTGATTCTGTAGCAATG
AAAGATTATAGTTCTCTCTTACAAAGGCTTATCTCTGATCTTAAGAGAGA
CTTTAATACTGACAAACCTTACGGTCAACTAATGTTGATAAGGGTACAAA
ACTTGGAATTCAAAAGCGTAAAGCCAAAACTCACCTGGAAACAACCAACA
TCCGACATCTTTCAAAATCATCTTTTGGTTAATGATTTCTTGAGAAGTGA
AAGAGACACTTTTATTTATCGAGATGCTTTTACTACAACTGAAGATGCAA
GAAGGTGGGTGCGATCTTATAGCTTTGACCGTATCTTTACAGCAGTCATC
AGAAATAATAATGGAGTTGTTGAAGTTCTTCTCCAAAAACATCAGGAACA
ATATGAAAAGGAGAAAAAATATTACTTCAAAAATATGGCTGAACTGCATA
GACTTAAAAGAAAACTGAAACTTCATTTTCCTGAGCTTTACATTCAACAT
AACAACAAGAGACTTTTACAAAATGATTGTTCTGGTGTACCCTGATCTCA
AAAGCCCAATCAGTGTATCAAATACCTGCTAGAAGAAACAGACTTAAAAT
CACCAGAACTAACTGAACATATTAACACTTTATTGAAAGTTTTTCCTGTC
AAATCATACCAAGGGGATTCTAAAGTCATTAATGGCACTGGTAATCTGTT
GTTGAAAGCAGGAGATGTTCAGAAGAATATTTCATTTTTGAAACAGATTT
TCAAGTTTGTTGAGAAAAAAAAGAGAAAGAAAGACGTTTTCGTATTCCAA
GAAGGGACGGAGAAGGTGATTGGAGAGTTGATGAAGTCCATTTCATGGGA
ATCAATTAGAGAGAGTGTTGAAAATGCTATCACCCTTACTGAACCATTGC
AGTATAAATCCTGGATGGACGTCGCTTCTATTGCTGATAATAGTGATCTT
GCCAATATCATTATAGAATTGAGTCATGCTCAACTATATGATGATTATAT
CGAAGTTTTGCTATGGGAGAAAATCTTTCATGAAGTTTGCAAGAGCAAGT
GTTTGAATGAACGTTGGTTCAAAACATTGTTGAATGATGAATCAATAAGG
ATTGACTTTGTCATTTCATCCAAATTTGCAATAGAAGCTATTAAAAGTGA
GAACAAAACACTTTATCCTTCCATCTCTACTCTTCTAAGAAATACCATTA
AAAGTACTGAAGATCTCATTTACATTGATGAGGAAATATTGCCTGGTGTT
CTTCGAGATATATTTGAAGTGTTATTCAATTATTATGATCAATTTTCAAG
CGAATTAAAAGAGCTGGTTACATGTTTGCTTGACAAAAACTATCACTTCA
TGGTCGGAAAAGCTCTGCTCAAATTATCAGTGTTAAATTTTCCCAATCCA
GAGGGTTTTGAGATGGTCTACGAGAAATCTTTGGACAGTTTCATAACGGA
ATGCGATGAAATTGAAGAAGAATTTGAAGATGAATTAATGGATGCGATCA
AAATCTTTATCCAAAGGAATATTGTGAATTCCACCTTGTTTATAAAGTTA
TTCAAATTTGTGTGCAAAACGATGGGAGAATCTTGTATTAGTGACATCAT
TATTAAGATAATGGAACAATGCTCAATATCAGAGAAAAACAGCTCAATTG
ACTTTTTGGAACAATTGATTCAACATTACATTACTTTGATAAAGAATGAT
CGGTATGTTGATAGCGAAATGATGGCTTCTTTGTTAATTGTCTTATTGAA
AACTAAAGAAGAGTCATTGTCAAAGTATTTGAAAGATTTGGTGGAAAGCA
AACCCATCAGTGAAAAGATTCTTGTTTCCCAAACTACACTCTCCTCAATT
TTTTCTGTCACAAACCAGAAGAGTTTCAGTGGCTTTACAGCAAGCAAATA
TTTTCGAGTAATTCTCACAAGCTATGTCAACATCATCAATACTAAACCAA
CGAAATCGAATCAGCTACCAACTCCTGACACATATAAAAGTGTTTTGATT
TACTTAGTGACTAATTGTGATTGGCCATCATCTATTGAGCTTTTAAGAAT
CTTACTTGATTCAGAATTCTACAAGAAAGATTTTGATATCAGTATGTTTT
GTTTGTCGCAATTGAAATGTCGTAATACAGAACCTTATAAAATGTTTCTC
AAATCCACTGTTGATGCTTTGAATGCATATCTAAATGATGAAGAAGATTC
AAAGGATGTTCCAGATTTCATTTATCAACACATACTCAAATTTGTGAGAA
TTTTGTTTAAAAATGATTGCTTCACTGATATTCTATTGTATTTGTTGTCA
TCTGAAGCGTTCCAAGCAAATGGAAAAATTGATTCTGTAGCAATGAAAGA
TTATAGTTCTCTCTTACAAAGGCTTATCTCTGATCTTAAGAGAGACTTTA
ATACTGACAAACCTTACGGTCAACTAATGTTGATAAGGGTACAAAACTTG
GAATTCAAAAGCGTAAAGCCAAAACTCACCTGGAAACAACCAACATCCGA
CATCTTTCAAAATCATCTTTTGGTTAATGATTTCTTGAGAAGTGAAAGAG
ACACTTTTATTTATCGAGATGCTTTTACTACAACTGAAGATGCAAGAAGG
TGGGTGCGATCTTATAGCTTTGACCGTATCTTTACAGCAGTCATCAGAAA
TAATAATGGAGTTGTTGAAGTTCTTCTCCAAAAACATCAGGAACAATATG
AAAAGGAGAAAAAATATTACTTCAAAAATATGGCTGAACTGCATAGACTT
AAAAGAAAACTGAAACTTCATTTTCCTGAGCTTTACATTCAACATAACAA
CAAGAGACTTTTACAAAATGATTGTTCTGGTGTACCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1611297..1613591 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 4-2298:2296 |
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