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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1352405..1354804+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030403 ID=XLOC_030403|Name=XLOC_030403|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2400bp|location=Sequence derived from alignment at sc0000043_pilon:1352405..1354804+ (Clytia hemisphaerica_ch_hm2_pilon)
cagaaattctGTTCCCAAGTATTTATTGGAAAGATACCAAGAGACATGTA
TGAAGATGAATTGGTTCCGCTGTTTGAGCCTTATGGTCAAATCTATGATT
TACGTATTATGGTTGATCCTTTTAGTGGACTGAACAAAGGTTATGCATTT
GTTACATACAGTACCAAAGAAGGAGCACAAAGTTCTGTCAAAGCTATGGA
GAACCATGAAGTAAGAGGTGGGAAAAAGCTTGGTGTTTGTCTTTCACAAG
CAAATAACAGACTCTTTGTTGGATCTATTCCTAAGACAAAAACCAAACAA
GATATCATGGAAGAATTTAAGACCAAAGTTGAGGAGTTGACAGATGTTAT
TATGTACTTTTCTGCAgaggataaaaataaaaacagaggTTTTGCTTTCC
TTGACTTTGCCACACACAAAGATGCTGCTCAGGCAagacgaaaattgcaa
agtgggCGTATCAAGGTTTTTGGACACATTACTCCAGCTGTTGATTGGGC
TGATTCCATGGATGAACCAAATGATGAAGTCATGTCTAAGGTAAGAGATT
ACCGCAAACCACTCAAATTTCTTCCCCATTATACTCCTAATCATCATTTG
AATTGCttccattttccatttttgtCACAAAGAACACAATTACAATACAA
GTGCTTTATTTATGCCctgaagttaaaaaaattaatatttaggGTTTACA
CCGCCAAAGTCAgcaatattttattaaaaaatcccAAACTTATTGATGTG
AATAACCAAGAATATTGaagttttgcggaatttaattttgcgatttAAAG
GGCCAAATTTGCATTAATTAATTCTGCATTAGTTAATTTTGCATTTATTT
GTTCCCTCAAGGCAATACTGATCTGCTATTTTAGTAGTATAGTTCAGTTT
ATACATAGTTTGCGCCCCCtttttttAATGGGGCGGGATGCTAGATTTTT
GGGGGGCCTTTGAAGGGGTTACCAAAATGTGCCTAAATTTTTTGGgtggg
aatgtaggggggggtcaaaaaagaaaaggggGTTTGGAAATCTGGTCAAT
ACATTTCATATAGTCGAACGttgttaaaataataaatttatgTCCCAACC
AAAACATACACTTGGTATCTTAAACGTTCTTATATACGACTTGACAAAGA
GAACATTTCTGGGaataaattttggtaaaagatacgacaagaaagttcaa
attatgacctctcgttaccagaccccttttttgaaaacgctgtcttgtat
ttgtacggtacaatatgaagTACAGGATTTATGTAAGCATTttaagccaa
tcagattgcttatatttttcatgttgatgataaaTAATGTTATATCTTGA
AATTGTTACATTTTGGACTCTTTGAtcattttttttggggggggggggca
agattgcattacaaaagggggatgaaataaacctagggggttcatacccc
tctgcaaactctGTTATAGCAAtcagtttttcatttctttttaggTGAAA
GTTGTCTATGTCAGACATTTATCTCCAGCCATCGACGAAAACAAATTGAA
TGAACTTTTCGAACAATATGGTCCTGTTGAGAAAGTGAAAAAGATTAAGG
ATTATGCTTTCATTAACTTTGCTAACAGGGATGATGCAATGAGAGCTATT
GAGGAACTTGATAACCAAGAATTGGACGATTTAAAAATTTCAGTACAACT
TGCTAAACCTCAAGTAGATAAAACAGGTCAACGACGTGGGCAATCTGGGT
TTGGTGCTCTTAACAAAAAGGGTGAGTCTGACAATTTTGTCCCCAGAGGA
AGAGGTGGTTTTTCTGGTCGTGGAGCTGTTGGCCCAAGAGGGCGTGGAAG
AGGAGGATTTGGAGGTGGTTTCTCACATGGAGGGAACTACTCTCAAGGTG
GATATAGAGGTTATGGAGATGACTCTTATGATGACTACTATGCACCACCA
GCCAGACCTCGTGGTGGTCCACCAAGCCGTGGCCCAAGTCGTGGTGGAGC
AATGAGAGGGGGAAGAGGTAGTCCTCGAGGAGGTTCAACTGGTGGTTTCC
GTGGTGCTTCCAGAGGTGGATCATCTAGAGGTGGTACTTATGGACAGCAA
AGAGGAGGAATGAACAGAGGGCGTGGTGGCTTTGGACGAGGAGGTTCAGA
CTATGGATCAGGCAGAGGTGGATCAAGAGGAGGTACTGGTGGTTATGGCT
CAAGAGGACGTGGTGCTGGGGCACCAAAAAGGAAAGCAGATTATGGTGGT
GATTATGGCACCCCCTCTAAACGTAAGAATGAGTGGAACTCCCAACCCAT
TGCCCAACAACCCCTTGGTAACTCATCCAGCAACTATTACAATGATGACT
ACAGTGGCGGTGACTGGTACACAGATTTATCTGAGCCCAGATGGcaataa
Coding sequence (CDS) from alignment at sc0000043_pilon:1352405..1354804+ >XLOC_030403 ID=XLOC_030403|Name=XLOC_030403|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2550bp|location=Sequence derived from alignment at sc0000043_pilon:1352405..1354804+ (Clytia hemisphaerica_ch_hm2_pilon)
cagaaattctGTTCCCAAGTATTTATTGGAAAGATACCAAGAGACATGTA
TGAAGATGAATTGGTTCCGCTGTTTGAGCCTTATGGTCAAATCTATGATT
TACGTATTATGGTTGATCCTTTTAGTGGACTGAACAAAGGTTATGCATTT
GTTACATACAGTACCAAAGAAGGAGCACAAAGTTCTGTCAAAGCTATGGA
GAACCATGAAGTAAGAGGTGGGAAAAAGCTTGGTGTTTGTCTTTCACAAG
CAAATAACAGACTCTTTGTTGGATCTATTCCTAAGACAAAAACCAAACAA
GATATCATGGAAGAATTTAAGACCAAAGTTGAGGAGTTGACAGATGTTAT
TATGTACTTTTCTGCAgaggataaaaataaaaacagaggTTTTGCTTTCC
TTGACTTTGCCACACACAAAGATGCTGCTCAGGCAagacgaaaattgcaa
agtgggCGTATCAAGGTTTTTGGACACATTACTCCAGCTGTTGATTGGGC
TGATTCCATGGATGAACCAAATGATGAAGTCATGTCTAAGcagaaattct
GTTCCCAAGTATTTATTGGAAAGATACCAAGAGACATGTATGAAGATGAA
TTGGTTCCGCTGTTTGAGCCTTATGGTCAAATCTATGATTTACGTATTAT
GGTTGATCCTTTTAGTGGACTGAACAAAGGTTATGCATTTGTTACATACA
GTACCAAAGAAGGAGCACAAAGTTCTGTCAAAGCTATGGAGAACCATGAA
GTAAGAGGTGGGAAAAAGCTTGGTGTTTGTCTTTCACAAGCAAATAACAG
ACTCTTTGTTGGATCTATTCCTAAGACAAAAACCAAACAAGATATCATGG
AAGAATTTAAGACCAAAGTTGAGGAGTTGACAGATGTTATTATGTACTTT
TCTGCAgaggataaaaataaaaacagaggTTTTGCTTTCCTTGACTTTGC
CACACACAAAGATGCTGCTCAGGCAagacgaaaattgcaaagtgggCGTA
TCAAGGTTTTTGGACACATTACTCCAGCTGTTGATTGGGCTGATTCCATG
GATGAACCAAATGATGAAGTCATGTCTAAGgTGAAAGTTGTCTATGTCAG
ACATTTATCTCCAGCCATCGACGAAAACAAATTGAATGAACTTTTCGAAC
AATATGGTCCTGTTGAGAAAGTGAAAAAGATTAAGGATTATGCTTTCATT
AACTTTGCTAACAGGGATGATGCAATGAGAGCTATTGAGGAACTTGATAA
CCAAGAATTGGACGATTTAAAAATTTCAGTACAACTTGCTAAACCTCAAG
TAGATAAAACAGGTCAACGACGTGGGCAATCTGGGTTTGGTGCTCTTAAC
AAAAAGGGTGAGTCTGACAATTTTGTCCCCAGAGGAAGAGGTGGTTTTTC
TGGTCGTGGAGCTGTTGGCCCAAGAGGGCGTGGAAGAGGAGGATTTGGAG
GTGGTTTCTCACATGGAGGGAACTACTCTCAAGGTGGATATAGAGgTGAA
AGTTGTCTATGTCAGACATTTATCTCCAGCCATCGACGAAAACAAATTGA
ATGAACTTTTCGAACAATATGGTCCTGTTGAGAAAGTGAAAAAGATTAAG
GATTATGCTTTCATTAACTTTGCTAACAGGGATGATGCAATGAGAGCTAT
TGAGGAACTTGATAACCAAGAATTGGACGATTTAAAAATTTCAGTACAAC
TTGCTAAACCTCAAGTAGATAAAACAGGTCAACGACGTGGGCAATCTGGG
TTTGGTGCTCTTAACAAAAAGGGTGAGTCTGACAATTTTGTCCCCAGAGG
AAGAGGTGGTTTTTCTGGTCGTGGAGCTGTTGGCCCAAGAGGGCGTGGAA
GAGGAGGATTTGGAGGTGGTTTCTCACATGGAGGGAACTACTCTCAAGGT
GGATATAGAGGTGGTACTTATGGACAGCAAAGAGGAGGAATGAACAGAGG
GCGTGGTGGCTTTGGACGAGGAGGTTCAGACTATGGATCAGGCAGAGGTG
GATCAAGAGGAGGTACTGGTGGTTATGGCTCAAGAGGACGTGGTGCTGGG
GCACCAAAAAGGAAAGCAGATTATGGTGGTGATTATGGCACCCCCTCTAA
ACGTAAGAATGAGTGGAACTCCCAACCCATTGCCCAACAACCCCTTGGTA
ACTCATCCAGCAACTATTACAATGATGACTACAGTGGCGGTGACTGGTAC
ACAGATTTATCTGAGCCCAGATGGcaataaGTGGTACTTATGGACAGCAA
AGAGGAGGAATGAACAGAGGGCGTGGTGGCTTTGGACGAGGAGGTTCAGA
CTATGGATCAGGCAGAGGTGGATCAAGAGGAGGTACTGGTGGTTATGGCT
CAAGAGGACGTGGTGCTGGGGCACCAAAAAGGAAAGCAGATTATGGTGGT
GATTATGGCACCCCCTCTAAACGTAAGAATGAGTGGAACTCCCAACCCAT
TGCCCAACAACCCCTTGGTAACTCATCCAGCAACTATTACAATGATGACT
ACAGTGGCGGTGACTGGTACACAGATTTATCTGAGCCCAGATGGcaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1352405..1354804 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1618-1935:2083 |
| Aaloc | 1201-1614:1495 |
| Aaloc | 661-1200:1 |
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