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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000267_pilon:9541..12942- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030136 ID=XLOC_030136|Name=XLOC_030136|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3402bp|location=Sequence derived from alignment at sc0000267_pilon:9541..12942- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAGAAACAACAAGTTCAATAAAAAACAAGGTAATTTTTGAATTTA
CAATTAGTAATTGAATCATTAATCGAAATTGAATATCATTCATCGTGGAT
TTTCAAGTTTCTAAGCTTTCTTGGGCATTAAACTATGATTTTTTTTGAGG
AAAGAAAATCCTCTTGACCAATCAAATTTCTAAACCCAAATAATTACTTC
ATAGGTGGGGAGAACACCTCTAAACTTCCACAGGACACTTCCCAACTCAG
TGAGGACACTTTTAGTACTCAGGATCGAGACATTCCAATGAGTCAATCGA
GTCAACCCCAGCCAGAGATGGAAGCAGAAGCATTTGATGACATTCCATCA
AGCCAACGAGAGTTAAAGGCAGAATCAAACTTCTCAAATGCAGGTATATC
ATTATGAACGTGCACATTCAGACACTGTAAAAGCTAACATTAGATTAGGT
CCCTTCCCTTTAGAGGGGGAGTGGGGCAGGCATCGTTATTCTCAATTTCC
TTGACATCTCTTGACCTGGCTAGTAGGTTGTGATCCTGGGACAATTCATT
ATCCTCTTGTTCCCCAGAAGTTATGTTGGCTAAACAAATTTCATTTGGCA
TTAGGTTTTCAGAGGGAATTATATTTGATTGATTCACCATAATTAATTTT
GTTGAGAATTTAATTTCAAGGATGCTAACAGGTATCAAGGTTCAATTTCA
AAGCGGCAAGTACAAAACGCCTACTAAGAAAAGAACTGTTGTTCGAAATC
TATATTCAAAAAATTGTTTTGTAAATCTGATGCTAACACAAAGTTTTTTT
AATTTACAAAAAGTGTTATCTAAAAGTATTAGTTTTACGTAGTGAGTAAA
TATTCCTTGAAAAGTATACTAAAGTTAAAACAAAAGCCAATCTTGATTTT
TTCTTTTTCCTAAACCTACTCTCTCTTATGAATTATAAGAACTTTCCTTT
TTCCTAAACATACTCCCTCTTATGACTCTTATTATAAGACGATAAGAATA
CACGTAAATTCTAAAAAAGGCTCTGTAATATAAATAGGGGGTCAAATCTA
TCTCTAGATTGTATGATCTGCAAATCAAATGTTGCCAAAATATTTCTTGA
ATCAAGCTTTTAATATTCATTTAACTGTGTCAATTTTTTATCAAAATTTC
ATTTCGTCAATACTTTGACATGGTCAAATTGACACCCTAAAAACAGCTCT
TTGTATATTTTCCTACTGAAAATTCTACCTTGCGAAAAAACATCTTATTG
AGCACAATAAAAATTTTTGCTACATAAAAGAAGTCTACAAAGGTATATTT
AACGACCCTGTTAATATTTGGTTCAAAAAGGGTCATTTTGTCAATAAATT
TCAAAGACATGTCAAAGGATTTTCAGCTATTACAAGTGAAACATTGGGCT
CTACTTACTTATTTAACTTTTTAGATTGATCATTCTTAAAATAAAACTGA
CATGAATAAATAAGGTGCAAGGAAATATTTTTCTCTTCTACGAAGAAGTT
CTGTAACTTTTATGAAAAAGCGCGGGAAAAAGTCATTAAAAGAGAGAAAA
TATTTGAAGTCTTCAAAGTACGATAAAAAGAATCACCACAAAGATTCAGA
TTTTGCAATTTTAATATGCTAATTTTTAAAGGTAATTTCAGCCGTTTTGA
GCAAACACAGGCGTTTTACTTGCCGGTTCAATTTCAAAGTGAAAATGTAA
AATACACTTATTTTTCAGTGTTGTTTATTACCCTTGAAAAAATTTTCACC
GAAATTCCTTTTTGTGAGTAAGGGGAAAAGAAATGTCAAGACCCTTTTTT
TTAAAGGTCCCCTGATGGAAAAACTAAACAAAATGACACAAAATACGTAT
ATTGGATTTTATTAATACAGGTATAATTAAATTACAGACACAGCTTTCCA
AGATTCAAATGCAGGCCCTTCAACACCTACAAAATCAATGCGAGTGGCGT
CAACACCTAGACAATCAACGCCAAGCCCGTCAACACCAAAGAAACGTGGG
TTAGAGGACAGTAAGTCTTGATGCTATAACAGTCAATTTCTTAGAAAAAG
AAACATTTTAATTTTAGCTTACATCATGTTACTCAAATTTCTTCACATAA
ACTCATCAGCAGCTATGTAAAACGAATAAATGCATCATTAATTTTCTCTA
CAATGACTCCCTTGTCAATTATGTATCACTTATATATACTAAAATTTCTA
GGATTTAGAAGAGGGGTTTGTTGCTCACACTGTAGGCGTTTTGAAACTGA
ATTTTCAAAGAAATTCCAAACATTTTATTAATAAACATCTTTTAGGTTGG
AAATTAACACCTCCCCTCCTACAATTAAGCATAGAAGAGTACTTTGTGCT
TTTCAGACTTTCATGCTTGTTCTCATTCTGCTTTTTTTACAGCATATCAT
GGTTATGTTTTAAAATTAACAAATGTTACGACAGCTGGGTCACCGTCTAA
ATCGAAATATTTCAGAGCAACACTGCATGACGGAGAAGATTTGAAATCAG
TTGTTTCGTACAATCCAAACCTTCATCCAGTGATGAAGAAGGCAAAGTTG
ACAGACCAACCTGTCAAAATCTCTCAATTCACAGAAATTGTCAACAGCTA
TGACCATACAAAAGACTTCAAATTGGGCAACCATTCAACAGTGGAACTTT
CTTCGGCTCCGTTATCTTTTGACCGAGTGAAAAATTTAATCCAAGAGTCC
ACCTCTATGACCAACATGATTGATGCTATTGACCAAGCTGTAGGTGATTT
TGTCAACGTGGAAGTGTATGTAGAATTGGGTGACTCCACAATCGAAGAAG
TTCCAACCAGATATGGAGTTAAAAGGAAACGCGAAGCTCTTATTCATGAT
GCATCATGCAGCGTTCCAATAAGGTTCGCCATTTGGAATGCTCACATTGA
TGCCATGCCTACAAGTGGACCCTACAGGCTCATGGATGTGAAGATCAACA
GCTTTAATGGCAAGTATTTCACGACTACAGCCAACACAGTTGTCTCTAAA
TCAGCAGCAAGTTCACTTCAACCAATGGAAGTCAGCCAGCCACAAATCAA
GACTGTCATGTCACCAGCCAAGACGATTGACCTATTTGAGCAAATCTACT
ACTGTCCAAAATGCAACCAAAAGTCCCTTCCATCAGACGGACCATTTTTG
AAGTGTCAAAATTGTGGTGGTAAATCCCTGTTAGAAGATGCACCAACCAG
ATTTAATGTGAGACTGTCATTTGAAGAACGCCTAACACTTACTGTGCCGC
ATGATTTACTTCAAGCATTATCCCTCGGAGTAAACATTGATGTCCATGAT
GAAATGTTTCAGGTTGCCTTATTGTCAAAAAAGTACTCCATCAAGTTTTC
ATACTCTGAACAATCTAAACACATCAACAAGTTTGAAATTTTGAAAAAGT
GA Coding sequence (CDS) from alignment at sc0000267_pilon:9541..12942- >XLOC_030136 ID=XLOC_030136|Name=XLOC_030136|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000267_pilon:9541..12942- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTAGAAACAACAAGTTCAATAAAAAACAAGATGGCTAGAAACAACA
AGTTCAATAAAAAACAAGGTGGGGAGAACACCTCTAAACTTCCACAGGAC
ACTTCCCAACTCAGTGAGGACACTTTTAGTACTCAGGATCGAGACATTCC
AATGAGTCAATCGAGTCAACCCCAGCCAGAGATGGAAGCAGAAGCATTTG
ATGACATTCCATCAAGCCAACGAGAGTTAAAGGCAGAATCAAACTTCTCA
AATGCAGGTGGGGAGAACACCTCTAAACTTCCACAGGACACTTCCCAACT
CAGTGAGGACACTTTTAGTACTCAGGATCGAGACATTCCAATGAGTCAAT
CGAGTCAACCCCAGCCAGAGATGGAAGCAGAAGCATTTGATGACATTCCA
TCAAGCCAACGAGAGTTAAAGGCAGAATCAAACTTCTCAAATGCAGACAC
AGCTTTCCAAGATTCAAATGCAGGCCCTTCAACACCTACAAAATCAATGC
GAGTGGCGTCAACACCTAGACAATCAACGCCAAGCCCGTCAACACCAAAG
AAACGTGGGTTAGAGGACAACACAGCTTTCCAAGATTCAAATGCAGGCCC
TTCAACACCTACAAAATCAATGCGAGTGGCGTCAACACCTAGACAATCAA
CGCCAAGCCCGTCAACACCAAAGAAACGTGGGTTAGAGGACACATATCAT
GGTTATGTTTTAAAATTAACAAATGTTACGACAGCTGGGTCACCGTCTAA
ATCGAAATATTTCAGAGCAACACTGCATGACGGAGAAGATTTGAAATCAG
TTGTTTCGTACAATCCAAACCTTCATCCAGTGATGAAGAAGGCAAAGTTG
ACAGACCAACCTGTCAAAATCTCTCAATTCACAGAAATTGTCAACAGCTA
TGACCATACAAAAGACTTCAAATTGGGCAACCATTCAACAGTGGAACTTT
CTTCGGCTCCGTTATCTTTTGACCGAGTGAAAAATTTAATCCAAGAGTCC
ACCTCTATGACCAACATGATTGATGCTATTGACCAAGCTGTAGGTGATTT
TGTCAACGTGGAAGTGTATGTAGAATTGGGTGACTCCACAATCGAAGAAG
TTCCAACCAGATATGGAGTTAAAAGCATATCATGGTTATGTTTTAAAATT
AACAAATGTTACGACAGCTGGGTCACCGTCTAAATCGAAATATTTCAGAG
CAACACTGCATGACGGAGAAGATTTGAAATCAGTTGTTTCGTACAATCCA
AACCTTCATCCAGTGATGAAGAAGGCAAAGTTGACAGACCAACCTGTCAA
AATCTCTCAATTCACAGAAATTGTCAACAGCTATGACCATACAAAAGACT
TCAAATTGGGCAACCATTCAACAGTGGAACTTTCTTCGGCTCCGTTATCT
TTTGACCGAGTGAAAAATTTAATCCAAGAGTCCACCTCTATGACCAACAT
GATTGATGCTATTGACCAAGCTGTAGGTGATTTTGTCAACGTGGAAGTGT
ATGTAGAATTGGGTGACTCCACAATCGAAGAAGTTCCAACCAGATATGGA
GTTAAAAGAAGTGGACCCTACAGGCTCATGGATGTGAAGATCAACAGCTT
TAATGGCAAGTATTTCACGACTACAGCCAACACAGTTGTCTCTAAATCAG
CAGCAAGTTCACTTCAACCAATGGAAGTCAGCCAGCCACAAATCAAGACT
GTCATGTCACCAGCCAAGACGATTGACCTATTTGAGCAAATCTACTACTG
TCCAAAATGCAACCAAAAGTCCCTTCCATCAGACGGACCATTTTTGAAGT
GTCAAAATTGTGGTGGTAAATCCCTGTTAGAAGATGCACCAACCAGATTT
AATGTGAGACTGTCATTTGAAGAACGCCTAACACTTACTGTGCCGCATGA
TTTACTTCAAGCATTATCCCTCGGAGTAAACATTGATGTCCATGATGAAA
TGTTTCAGGTTGCCTTATTGTCAAAAAAGTACTCCATCAAGTTTTCATAC
TCTGAACAATCTAAACACATCAACAAGTTTGAAATTTTGAAAAAGTGAAA
GTGGACCCTACAGGCTCATGGATGTGAAGATCAACAGCTTTAATGGCAAG
TATTTCACGACTACAGCCAACACAGTTGTCTCTAAATCAGCAGCAAGTTC
ACTTCAACCAATGGAAGTCAGCCAGCCACAAATCAAGACTGTCATGTCAC
CAGCCAAGACGATTGACCTATTTGAGCAAATCTACTACTGTCCAAAATGC
AACCAAAAGTCCCTTCCATCAGACGGACCATTTTTGAAGTGTCAAAATTG
TGGTGGTAAATCCCTGTTAGAAGATGCACCAACCAGATTTAATGTGAGAC
TGTCATTTGAAGAACGCCTAACACTTACTGTGCCGCATGATTTACTTCAA
GCATTATCCCTCGGAGTAAACATTGATGTCCATGATGAAATGTTTCAGGT
TGCCTTATTGTCAAAAAAGTACTCCATCAAGTTTTCATACTCTGAACAAT
CTAAACACATCAACAAGTTTGAAATTTTGAAAAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000267_pilon | genome | sc0000267_pilon:9541..12942 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 781-1269:490 |
| Aaloc | 349-777:1009 |
| Aaloc | 226-345:1514 |
| Aaloc | 37-222:3197 |
| Aaloc | 1-33:3403 |
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