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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000351_pilon:265040..269522+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030123 ID=XLOC_030123|Name=XLOC_030123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4483bp|location=Sequence derived from alignment at sc0000351_pilon:265040..269522+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCTATTGATCGTAAAAGAAAACTATCTTCAAGCAAAAGAAATAA
TACAGAAAGTAGTGATGAAGAACTTGAGGACTTTTTGTTTGGAAATACCA
ATTTCAAAACAGCATCAAAAGATGAAGTGATTTCTGATATTAATGTTCAA
GGGGAGACAGAAACACTTTTACCTTTCTCCATAAGTACAAAACCAAGCCA
CTTTGATGGTGAGAAATTGGTTGAAGAAGATACTGAAAAGAAACAAGAGC
AACAACAGgtgatttaaataaaaaaagaagagtttttaaaaattcttgtt
AACCTTTTTATGCAATGCTTCACAATAGGTTAATAAATACTAATCTTCaa
aaaaagtagatttttatgaaccaaatttcactttttctcaTTTATTACCT
GACAAATGTCTAGAGGACATGAGACTCAGAGTACTAATATATGTAATTGT
TGCTTTTTATGATTATAACTCCTTGCAGTTGAGCACTATGGTATTGAAAC
ATTTACAAACTCAATATAGAGTTTGTTTATAATTTATATGTAAATATTTT
ATCCATCAATCTTGTTTTTCAGGATGAGGTTCAATTACTTGACCCTTTTG
AAAAGAAAGCTGCTTGGGAAGATCCTGATGATGACCAGATACAGTAAGAA
TCAttcttgttcttgtttttcatttttattgttttttattttatgtttac
atttgatttGACATGCAGAAAATAACAATTCCTTGTTCAATTATTCTTGA
TTGTTGATTAAACATGAATATTTTGTTCCATTTATAGGGTTGATTTGaat
gagaaaaagaaattcaagagGATGAGAACCAACTATCAAGAAACAAGTGT
CAGTGGAAAAACATTTCAGAAGAGGCTCAAGGAAAGGTACTATGGTATAT
TAAATAAACAAACACTAGAATTTATGGCTGATGTCTTTTAGACAAAATAA
AATCTCAATCGCTTTCTCTTTCACCATAGATACGAGCGAGTTTTACCTGC
ACCAGCTTGGGCAGATATTTCTAATGTTGaaaaaaaGGATGATGAAGGTA
AAATAAATAATTCTGTGGAATGTttgaatttcttattttatgtaTACAAT
CTAATTTGTTTTTAGTTCTTAATTGTGCCTTCCCAAGCGATTTTAAGTAC
CTAAAAATTTGACCGGTCTTTAGACTGTCTTTTGTTAAGGGCCAGTAATT
GACTGGTAAAAATCTGGGAGAAGGTCCCTGCAAGTATAGCTAAATTAGCA
GCTATTTTGAGAGCATCTATTTCAACAAATAAATCTTCTAGTTGTCTTGA
TGTAATGGTTACTAACAAACACCAGCAAACACTAACAAACAGCCAGGACC
AGTCTAACAAGTGGCAATATATGTATAAAAACAGCCAGGGCGGTTCAAAA
TCAGATTTATAGAAGGTCTGAAGGCCAATTTAAAACAATTACTTTACCGC
TGCTAGACCGTTCGTAATACCGCTCCAGGGCCAGTCCACTTTTCAGATAA
TTTAATCCCTTTGGGAATCACCATTGGGGATGTTTTATAAGCAATgttat
ttattcaatatttccaaaaaagtaATTGTATTGTTCTTTTTAGATAAACT
CTTCAATACTGCATCAGATCTTTTGGAAAAATCGTCAAGTTTACCAAGTG
GGAAAATACAATTGACAAGAAAGTTAAATCTGAACAAGAAACAACCAGAC
GGTTTGAGCATAACTTCTCTTGGATTTCATCCATCAGCTAAGATTGCTTT
TACTGCTTCATCTGGTAAGAGGCTGACTATATTTCAGGtaactttttcta
attttgttgAATTCTTTTGCACGCAAATACCATGGAAACAACCTGATTTT
AAGTGACTTTTTATAGACATACACTTTAAAGTAAAGAGAACATGGTAATT
TGTaaaattattatcaatcaaGTGCATTAAAATAGTCTGAATTAACCCAA
GATTTGCCAAAGTAGAAGATGACAGACACAAAAATAAgttactttacttt
ttttaggCTGATggggaagaaaacaaaaaactacAAAGTGTATTTGTGCG
AGATTTCGCGATTACCTCAGCAGCTTTTACTGATGGTGGCTCAAAAATCC
TCATGACTGGTGACAAATCGCGATACATTATATTTGATCTTCTTGCAGGG
AACATTATTGATGTCCCAGGGTTAAGAGGTAACACAATGGATTAGTACAG
TCAACCTAATACTTACATGCTGAAAGTTTCTAGAAAAATGTTAAAGTTTG
TCTCAATTAGTTTTAATTGTTCTAAATAAGCACCATTAAAAATCAAGGAC
ACAGTTTACTTGACTTAAATCATATCTATTGGATATTTTTCGATccaaaa
gaattattttgaggtTTGGAGTTGCGTTATTTAATGTTTATTTCCCTCCT
AATAGGCAAGAAAGGGTTGAATCTTGACAAATTTACTATTTCACCCGATG
GGAGCGCAGTAGGATTTCTCGGAGATTCATGGATATTTACATTTCGCTTC
AGTAGAGGTAAGATCTCTTATTAAGAAGTGATGATTCTATTTGTGACTTT
CACAATTTTTACTtgctaaaatttaagaaattgttGCCTTGTCAATATAA
GCTCTCACCAAACCTAGAAAACTAACCCCTAATAATTGTTTAAAATGCTC
ATTTTCAGGGAAGATATGTCCtaacaattaaaaaattgattctagtcaaa
attagaaaatcgcTTCACtcatcaaaatgattttttttccaaactagTTT
TTCTTAGGACTATTGCTCTTCAACAAAATTAGCCCTTAAGTACGAAATAT
GAAATTGTATAACATGGCATACAACAGTGGGactttgacttttttcttta
tttaggtCTACAAACTTTGGCGAGCAAAAACTTTCACAAGGTCGAAAAat
gttttgaggaaaaaatattgttttttttttgcaagcaAGAAACTTTCGCT
AACCGTTGGATAAACAtgacaaaatttaaaacatactTGAATTATTCATT
GATTATTTATTGCAAATTCAAAGTTTTGCtagattttcaactttttaaag
aaTCTTGTGCGTGTATCAACTTTCGGGAATCACCTAATTAAGACATTAAC
TTTCATGAAAAAGGCCTAAACACGATTTCATTTTAAACTTTGGCATTTGC
TTTGTTTTTAGTCATGTCAGTATATGTACAGTTTGAAAATGAATGGTACC
AATTTCAGCCGCAAcatattcaaaaaaatcaaaccaaatctaTACGACAG
GAGGTAAATTACTTTTTtaatattaaaattttcaataggaACTGTACTAT
ATCGACTAAATATTCTATATTTCAACTCAAATTCATTAATTGATTTTAGG
TGACGGAGAAGTGTATATATGGGATGCTCGCAATAGAAAGTGTTTACATA
GATTTATAGATGATGGATCTATTGGCAGTACATCAATTGCATGTTCCAAC
AATGGGAAATTCTTAGCTGTGGGGTATGTACTCATTATAATTTAGTGACT
GGTGATGACCTCAttaatttcatttatttacaaTAAATGTGACTAGATTA
GTGAATAGTATCATAACATTTCCCTTAGCTCGAAGAAGTGGCGTTGTCAA
CATCTACAACAATGAAGGTattgagaatttcaaaacacCAAAACCTGTCA
AAACGATGATGAACCTCAAAACTGAAATCGATGGAACTGCTTTCAACTCA
ACTAGGTACAATTAAATGAATTATGTAcacaaaaacaaatattaagTTCA
TTTTAGATACTTTTAGATAGTTTGACAGTAAGTAAGAAAGTCTGCAACCG
CAGTCAGAGGccacccgaaggctcctctttcgatagctatctacccattG
GTATGGGAGGCTGTCACTCTttttccctggattgctccacatACATaccc
ttgatctttctcttaattgctgagcatcaagcagagaggcgtcaagtacc
attttgggaatctttggtatgacccggctgggggttgaacccacaacctt
gtgaaTCGTAGCCTGTtactctaccactgcactacagtCGTTTCACGGTC
GTTTGACAGTAAACTTCCTCATTGTCAGTAGGGAAGTTTTGGTCAAAtga
ttaaagggacataaaagtactgacgaaatttatAAGCAAACCGTTTGCAG
CGGGATACGAAATCAAagcaaatgtcacatgtcaaaatgaaaataaaaaa
tatggataattttgattgtttcaattgttttacaagtttgttttggacac
gtgattttaattgttctctttaatgacacgtagttcgcgcaatgtttaca
ttttactacttttatgtccttTTAACAAGTAAAGCCCTGTCAAGTTTCAC
ACAACCCAGTCACAGCAATTATAATTATTAACAATGCCGttaatttataa
ttaaaaaaacatttcttactCTTTGTTTTAGCGAAATCCTGGTCACATAT
ACATCACATACGAAGCATGCAATCAAAATGGTA Coding sequence (CDS) from alignment at sc0000351_pilon:265040..269522+ >XLOC_030123 ID=XLOC_030123|Name=XLOC_030123|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2716bp|location=Sequence derived from alignment at sc0000351_pilon:265040..269522+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCTATTGATCGTAAAAGAAAACTATCTTCAAGCAAAAGAAATAA
TACAGAAAGTAGTGATGAAGAACTTGAGGACTTTTTGTTTGGAAATACCA
ATTTCAAAACAGCATCAAAAGATGAAGTGATTTCTGATATTAATGTTCAA
GGGGAGACAGAAACACTTTTACCTTTCTCCATAAGTACAAAACCAAGCCA
CTTTGATGGTGAGAAATTGGTTGAAGAAGATACTGAAAAGAAACAAGAGC
AACAACAGATGTTTTCTATTGATCGTAAAAGAAAACTATCTTCAAGCAAA
AGAAATAATACAGAAAGTAGTGATGAAGAACTTGAGGACTTTTTGTTTGG
AAATACCAATTTCAAAACAGCATCAAAAGATGAAGTGATTTCTGATATTA
ATGTTCAAGGGGAGACAGAAACACTTTTACCTTTCTCCATAAGTACAAAA
CCAAGCCACTTTGATGGTGAGAAATTGGTTGAAGAAGATACTGAAAAGAA
ACAAGAGCAACAACAGGATGAGGTTCAATTACTTGACCCTTTTGAAAAGA
AAGCTGCTTGGGAAGATCCTGATGATGACCAGATACAGATGAGGTTCAAT
TACTTGACCCTTTTGAAAAGAAAGCTGCTTGGGAAGATCCTGATGATGAC
CAGATACAGGTTGATTTGaatgagaaaaagaaattcaagagGATGAGAAC
CAACTATCAAGAAACAAGTGTCAGTGGAAAAACATTTCAGAAGAGGCTCA
AGGAAAGGGTTGATTTGaatgagaaaaagaaattcaagagGATGAGAACC
AACTATCAAGAAACAAGTGTCAGTGGAAAAACATTTCAGAAGAGGCTCAA
GGAAAGATACGAGCGAGTTTTACCTGCACCAGCTTGGGCAGATATTTCTA
ATGTTGaaaaaaaGGATGATGAAGATACGAGCGAGTTTTACCTGCACCAG
CTTGGGCAGATATTTCTAATGTTGaaaaaaaGGATGATGAAGATAAACTC
TTCAATACTGCATCAGATCTTTTGGAAAAATCGTCAAGTTTACCAAGTGG
GAAAATACAATTGACAAGAAAGTTAAATCTGAACAAGAAACAACCAGACG
GTTTGAGCATAACTTCTCTTGGATTTCATCCATCAGCTAAGATTGCTTTT
ACTGCTTCATCTGGTAAGAGGCTGACTATATTTCAGATAAACTCTTCAAT
ACTGCATCAGATCTTTTGGAAAAATCGTCAAGTTTACCAAGTGGGAAAAT
ACAATTGACAAGAAAGTTAAATCTGAACAAGAAACAACCAGACGGTTTGA
GCATAACTTCTCTTGGATTTCATCCATCAGCTAAGATTGCTTTTACTGCT
TCATCTGGTAAGAGGCTGACTATATTTCAGgCTGATggggaagaaaacaa
aaaactacAAAGTGTATTTGTGCGAGATTTCGCGATTACCTCAGCAGCTT
TTACTGATGGTGGCTCAAAAATCCTCATGACTGGTGACAAATCGCGATAC
ATTATATTTGATCTTCTTGCAGGGAACATTATTGATGTCCCAGGGTTAAG
AGgCTGATggggaagaaaacaaaaaactacAAAGTGTATTTGTGCGAGAT
TTCGCGATTACCTCAGCAGCTTTTACTGATGGTGGCTCAAAAATCCTCAT
GACTGGTGACAAATCGCGATACATTATATTTGATCTTCTTGCAGGGAACA
TTATTGATGTCCCAGGGTTAAGAGGCAAGAAAGGGTTGAATCTTGACAAA
TTTACTATTTCACCCGATGGGAGCGCAGTAGGATTTCTCGGAGATTCATG
GATATTTACATTTCGCTTCAGTAGAGGCAAGAAAGGGTTGAATCTTGACA
AATTTACTATTTCACCCGATGGGAGCGCAGTAGGATTTCTCGGAGATTCA
TGGATATTTACATTTCGCTTCAGTAGAGTCATGTCAGTATATGTACAGTT
TGAAAATGAATGGTACCAATTTCAGCCGCAAcatattcaaaaaaatcaaa
ccaaatctaTACGACAGGAGTCATGTCAGTATATGTACAGTTTGAAAATG
AATGGTACCAATTTCAGCCGCAAcatattcaaaaaaatcaaaccaaatct
aTACGACAGGAGGTGACGGAGAAGTGTATATATGGGATGCTCGCAATAGA
AAGTGTTTACATAGATTTATAGATGATGGATCTATTGGCAGTACATCAAT
TGCATGTTCCAACAATGGGAAATTCTTAGCTGTGGGGTGACGGAGAAGTG
TATATATGGGATGCTCGCAATAGAAAGTGTTTACATAGATTTATAGATGA
TGGATCTATTGGCAGTACATCAATTGCATGTTCCAACAATGGGAAATTCT
TAGCTGTGGGTCGAAGAAGTGGCGTTGTCAACATCTACAACAATGAAGGT
attgagaatttcaaaacacCAAAACCTGTCAAAACGATGATGAACCTCAA
AACTGAAATCGATGGAACTGCTTTCAACTCAACTAGTCGAAGAAGTGGCG
TTGTCAACATCTACAACAATGAAGGTattgagaatttcaaaacacCAAAA
CCTGTCAAAACGATGATGAACCTCAAAACTGAAATCGATGGAACTGCTTT
CAACTCAACTAGCGAAATCCTGGTCACATATACATCACATACGAAGCATG
CAATCAAAATGGTACGAAATCCTGGTCACATATACATCACATACGAAGCA
TGCAATCAAAATGGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000351_pilon | genome | sc0000351_pilon:265040..269522 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1306-1356:4433 |
| Aaloc | 1180-1302:3581 |
| Aaloc | 1057-1176:3352 |
| Aaloc | 1003-1053:3202 |
| Aaloc | 964-1002:3162 |
| Aaloc | 934-963:2478 |
| Aaloc | 865-933:2408 |
| Aaloc | 691-861:2007 |
| Aaloc | 499-690:1596 |
| Aaloc | 430-495:981 |
| Aaloc | 331-426:789 |
| Aaloc | 259-327:573 |
| Aaloc | 1-258:1 |
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