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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000352_pilon:269..2243- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_030034 ID=XLOC_030034|Name=XLOC_030034|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1975bp|location=Sequence derived from alignment at sc0000352_pilon:269..2243- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGATTTATTTGAATGATGATTTTCGTGGCGGACAGACAAAATTTTA
TGTTCCAAAAGACTCATCTGTTGACACCAAAGGATGTACTGTGAAGGAGG
AAATCAAGAGACATCGAAGTTTACGTTCAGGGTATGACTGTTTCTCTGTG
TCTCCAGAAACTGGTTGTGGTCTCATTTTCAAACAAAACTTGATCCATGA
AGGTTGTAAACTCACACCAAACAAAAGTTACAAATTTGTCATCAAAACAG
ACATTATGGTTGAACGTGTGGATGCCAAATTGGGATTCTACCCTCCCAAA
GATGAGATTGATGATTATCAGAAATGTTTACAATTATTTCGCCAAGCACA
GCAATTTGAAATGGAAAAGGACAATAAGAGAGCAAATGAATGTTATGAGA
AAAGTCTCTCGTTGAGGTATAACTACCCACAACATTTTGACGCTGTCTCA
GAACCTGTGTTGCCAAAGGAATTACCAATCTCTCAAGACCATTCCATATC
AAATTCACAAATATCAACTTTGTCCACCAACTCATCTGCTCCTATAACGA
ACCCATTCAACATTTTCTCTCAAGAGGTTTGGCATAAGATCATGGTCTAC
CTGCAGGATGACAAATCTTTACAAAGCTTATGTGAAGTTTTTCCATCTTT
GAATACAGAAAAACGGAAAGTGCTTTCCAGTAGATTCATGCCAACTGTTG
ACTACCACAGTGGAGTTTTCACCAAATTCTCATTTCAAAATGGAGAATTT
GTCACAGCCAATCTGGAAAGATGCATTAAAGTTGCAGCAGTGCATTCAAT
TTGTTTACTCGGAAATGCACCCAATGATAAACACTATTTGGTAAATTATG
ATAGAGAAACAAGGATTGCAACAACTGTACAGTTGAGAGATCTTCTTTAT
GGTGTATTTGCTGAGGAACCTGTCCACGGTACCATCTTCAAAGTAGCTCA
AAGAAAAGCGAACAAGAATCCAAATGAAGATTTGTACCATAGTGTTGATA
GGAAATTCATGTCAACACATTTTGATCGAGATGATGTAGGCATTGATGTA
GAATCTGAAATCAGATCACATGTCACGAGGCTTGGTCGAGAATCTGATGA
TGAAGAATCTGGCGGTGAATCCGATGGTGAATCCAGCTCTGGCCTTGATT
CTGACTATGACGATTGTGAGGATTACTTCTCAAACATTGGCAAGTGGAAA
TCTTACAAGCCAAGAGACTTTCATGGACGATATATTCTCAATGCTATTGA
CAGATATTATGAATACTGTAAAAATGAGCTACCACCCGACCCAGAAAAAT
TACCAGAGCTTGAATCGTCAGAAGAAACAAATTCTCAATCAGAATTAGAT
CTGTATGCTTTGAAATCAGAAGAATTTCAATGTATAACGTACACTGACGA
GGCGCGAGATGAATTCTTCAACGATTTCTTTCCTCAATGTGAAACATTTC
CACCAACATGCTACTGCTACTAAAATTGATGTTCCAAATGTACCGAAGCC
AGGATCAACCATCGTCAGAAAACTCGATCGACCTGTCACCATTGAAAAGG
ATGAAAATTGTTGTTGCATGTTTAAAGATGTTAGTGGTACATTCAGTAAG
GAATGTTCAACGCATACTTTCAACAGTATTATTGCTGACTTCAGCAAAAT
TAAATTATCCGTCAACGATTTGGTTGAAGAATCTCCTATTACGGAAGCAA
GCGGCTCTCTGTATGCATGGCTCGAACATTTTTGCGAAAGCGACTTATTT
GATTTAACAGATTGCAGCGTTCGAATTACCGAAATGGAGCAGGTTTTACC
CTCATTTAACCATGCGTCGTGCCAGTGTGGGTTCCCCAAATATCGAGTTG
ACGATTACGTCAATTTGTCGAGCTACCCTTTGTTGGAGAATGTGGTTATC
ACTGTTGCGAAAAACAAAGTTGATCCTAATGAAGTTTATATATTTACTGC
GTATGGAGGCATTGCTGCTCTTTAA Coding sequence (CDS) from alignment at sc0000352_pilon:269..2243- >XLOC_030034 ID=XLOC_030034|Name=XLOC_030034|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3950bp|location=Sequence derived from alignment at sc0000352_pilon:269..2243- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGATTTATTTGAATGATGATTTTCGTGGCGGACAGACAAAATTTTA
TGTTCCAAAAGACTCATCTGTTGACACCAAAGGATGTACTGTGAAGGAGG
AAATCAAGAGACATCGAAGTTTACGTTCAGGGTATGACTGTTTCTCTGTG
TCTCCAGAAACTGGTTGTGGTCTCATTTTCAAACAAAACTTGATCCATGA
AGGTTGTAAACTCACACCAAACAAAAGTTACAAATTTGTCATCAAAACAG
ACATTATGGTTGAACGTGTGGATGCCAAATTGGGATTCTACCCTCCCAAA
GATGAGATTGATGATTATCAGAAATGTTTACAATTATTTCGCCAAGCACA
GCAATTTGAAATGGAAAAGGACAATAAGAGAGCAAATGAATGTTATGAGA
AAAGTCTCTCGTTGAGGTATAACTACCCACAACATTTTGACGCTGTCTCA
GAACCTGTGTTGCCAAAGGAATTACCAATCTCTCAAGACCATTCCATATC
AAATTCACAAATATCAACTTTGTCCACCAACTCATCTGCTCCTATAACGA
ACCCATTCAACATTTTCTCTCAAGAGGTTTGGCATAAGATCATGGTCTAC
CTGCAGGATGACAAATCTTTACAAAGCTTATGTGAAGTTTTTCCATCTTT
GAATACAGAAAAACGGAAAGTGCTTTCCAGTAGATTCATGCCAACTGTTG
ACTACCACAGTGGAGTTTTCACCAAATTCTCATTTCAAAATGGAGAATTT
GTCACAGCCAATCTGGAAAGATGCATTAAAGTTGCAGCAGTGCATTCAAT
TTGTTTACTCGGAAATGCACCCAATGATAAACACTATTTGGTAAATTATG
ATAGAGAAACAAGGATTGCAACAACTGTACAGTTGAGAGATCTTCTTTAT
GGTGTATTTGCTGAGGAACCTGTCCACGGTACCATCTTCAAAGTAGCTCA
AAGAAAAGCGAACAAGAATCCAAATGAAGATTTGTACCATAGTGTTGATA
GGAAATTCATGTCAACACATTTTGATCGAGATGATGTAGGCATTGATGTA
GAATCTGAAATCAGATCACATGTCACGAGGCTTGGTCGAGAATCTGATGA
TGAAGAATCTGGCGGTGAATCCGATGGTGAATCCAGCTCTGGCCTTGATT
CTGACTATGACGATTGTGAGGATTACTTCTCAAACATTGGCAAGTGGAAA
TCTTACAAGCCAAGAGACTTTCATGGACGATATATTCTCAATGCTATTGA
CAGATATTATGAATACTGTAAAAATGAGCTACCACCCGACCCAGAAAAAT
TACCAGAGCTTGAATCGTCAGAAGAAACAAATTCTCAATCAGAATTAGAT
CTGTATGCTTTGAAATCAGAAGAATTTCAATGTATAACGTACACTGACGA
GGCGCGAGATGAATTCTTCAACGATTTCTTTCCTCAATGTGAAACATTTC
CACCAACATGCTACTGCTACTAAAATTGATGTTCCAAATGTACCGAAGCC
AGGATCAACCATCGTCAGAAAACTCGATCGACCTGTCACCATTGAAAAGG
ATGAAAATTGTTGTTGCATGTTTAAAGATGTTAGTGGTACATTCAGTAAG
GAATGTTCAACGCATACTTTCAACAGTATTATTGCTGACTTCAGCAAAAT
TAAATTATCCGTCAACGATTTGGTTGAAGAATCTCCTATTACGGAAGCAA
GCGGCTCTCTGTATGCATGGCTCGAACATTTTTGCGAAAGCGACTTATTT
GATTTAACAGATTGCAGCGTTCGAATTACCGAAATGGAGCAGGTTTTACC
CTCATTTAACCATGCGTCGTGCCAGTGTGGGTTCCCCAAATATCGAGTTG
ACGATTACGTCAATTTGTCGAGCTACCCTTTGTTGGAGAATGTGGTTATC
ACTGTTGCGAAAAACAAAGTTGATCCTAATGAAGTTTATATATTTACTGC
GTATGGAGGCATTGCTGCTCTTTAAATGCTGATTTATTTGAATGATGATT
TTCGTGGCGGACAGACAAAATTTTATGTTCCAAAAGACTCATCTGTTGAC
ACCAAAGGATGTACTGTGAAGGAGGAAATCAAGAGACATCGAAGTTTACG
TTCAGGGTATGACTGTTTCTCTGTGTCTCCAGAAACTGGTTGTGGTCTCA
TTTTCAAACAAAACTTGATCCATGAAGGTTGTAAACTCACACCAAACAAA
AGTTACAAATTTGTCATCAAAACAGACATTATGGTTGAACGTGTGGATGC
CAAATTGGGATTCTACCCTCCCAAAGATGAGATTGATGATTATCAGAAAT
GTTTACAATTATTTCGCCAAGCACAGCAATTTGAAATGGAAAAGGACAAT
AAGAGAGCAAATGAATGTTATGAGAAAAGTCTCTCGTTGAGGTATAACTA
CCCACAACATTTTGACGCTGTCTCAGAACCTGTGTTGCCAAAGGAATTAC
CAATCTCTCAAGACCATTCCATATCAAATTCACAAATATCAACTTTGTCC
ACCAACTCATCTGCTCCTATAACGAACCCATTCAACATTTTCTCTCAAGA
GGTTTGGCATAAGATCATGGTCTACCTGCAGGATGACAAATCTTTACAAA
GCTTATGTGAAGTTTTTCCATCTTTGAATACAGAAAAACGGAAAGTGCTT
TCCAGTAGATTCATGCCAACTGTTGACTACCACAGTGGAGTTTTCACCAA
ATTCTCATTTCAAAATGGAGAATTTGTCACAGCCAATCTGGAAAGATGCA
TTAAAGTTGCAGCAGTGCATTCAATTTGTTTACTCGGAAATGCACCCAAT
GATAAACACTATTTGGTAAATTATGATAGAGAAACAAGGATTGCAACAAC
TGTACAGTTGAGAGATCTTCTTTATGGTGTATTTGCTGAGGAACCTGTCC
ACGGTACCATCTTCAAAGTAGCTCAAAGAAAAGCGAACAAGAATCCAAAT
GAAGATTTGTACCATAGTGTTGATAGGAAATTCATGTCAACACATTTTGA
TCGAGATGATGTAGGCATTGATGTAGAATCTGAAATCAGATCACATGTCA
CGAGGCTTGGTCGAGAATCTGATGATGAAGAATCTGGCGGTGAATCCGAT
GGTGAATCCAGCTCTGGCCTTGATTCTGACTATGACGATTGTGAGGATTA
CTTCTCAAACATTGGCAAGTGGAAATCTTACAAGCCAAGAGACTTTCATG
GACGATATATTCTCAATGCTATTGACAGATATTATGAATACTGTAAAAAT
GAGCTACCACCCGACCCAGAAAAATTACCAGAGCTTGAATCGTCAGAAGA
AACAAATTCTCAATCAGAATTAGATCTGTATGCTTTGAAATCAGAAGAAT
TTCAATGTATAACGTACACTGACGAGGCGCGAGATGAATTCTTCAACGAT
TTCTTTCCTCAATGTGAAACATTTCCACCAACATGCTACTGCTACTAAAA
TTGATGTTCCAAATGTACCGAAGCCAGGATCAACCATCGTCAGAAAACTC
GATCGACCTGTCACCATTGAAAAGGATGAAAATTGTTGTTGCATGTTTAA
AGATGTTAGTGGTACATTCAGTAAGGAATGTTCAACGCATACTTTCAACA
GTATTATTGCTGACTTCAGCAAAATTAAATTATCCGTCAACGATTTGGTT
GAAGAATCTCCTATTACGGAAGCAAGCGGCTCTCTGTATGCATGGCTCGA
ACATTTTTGCGAAAGCGACTTATTTGATTTAACAGATTGCAGCGTTCGAA
TTACCGAAATGGAGCAGGTTTTACCCTCATTTAACCATGCGTCGTGCCAG
TGTGGGTTCCCCAAATATCGAGTTGACGATTACGTCAATTTGTCGAGCTA
CCCTTTGTTGGAGAATGTGGTTATCACTGTTGCGAAAAACAAAGTTGATC
CTAATGAAGTTTATATATTTACTGCGTATGGAGGCATTGCTGCTCTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000352_pilon | genome | sc0000352_pilon:269..2243 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1459-1974:517 |
| Aaloc | 1-1458:1976 |
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