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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:171631..174970+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029853 ID=XLOC_029853|Name=XLOC_029853|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3340bp|location=Sequence derived from alignment at sc0000107_pilon:171631..174970+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGTGTGCTGAATGTGGAGTGAAGCAGAAAAAGGTGGGCAAAACAGC
CATTGATTATAAACCTCTGGGAAAGACATGTCTTACGACGGAGAGGTACA
GAATTCATGGCAGGGTAAGAAGAGACTTCcgtttaaatgaaattttaatg
aaatcagGCAACTTTCGTTTTAGCCTGTCCCACATTGAACCATGTAGAAA
TTAAATAAAACCCTAAAGGCTGTACTCAACCTCGGTCAAGCCAAATCTTT
GACGgccattttttggattttagtcCCAAATCAATGGATAAACGAAAAAG
ATTCGTTTGACGTCAAATTGCACAGACTGCAGGCACAGATTTACTTAGAT
GCAGTATTTTTGCCTTGGTAGGATTTTCTGCCAAGGAACAAAAGAAGTTC
ACGTAATTAACCCAATGAGAAGCGtcgcgatattcacttttttttgcttg
gaaaagcttaacCCTATTAGAGTGTGTTTTACACCACGCACATGCTTTTT
GCCAAATAACTCctggaaaactttttgaaacacccTGAAATTTTCTGACA
ATTAATCAAAATATATAAGACAaaattctgccaaatttcaagtttgTACC
CCCACTgcatcaaattttatgacttttatttATAACACCGGCCATAAACT
CCaactaaaatcctttaaaacttaaaaaccttaaaatgctCATAACTTCT
TGAATACTTAtcaaaattgagtcaaattttcacaaattttacgtatcaaa
aaaggacattgaaaaaacaaaaaaaattccaaaaatatttagacgtcatt
ttctatgacgtcataacttttcaacatttttactCGTATTAAGCATTGAT
TTtaaggatttaaaatatttgccgGTTGTTATACCATAAGGGTATAacaa
ccggcaaatatgttaaagagtATCCTTGGCTTTCAGAAActtcaaacaga
attgaaaaatctttttccgtTCGGTTTCAATTGATCTTTTTGTAAGTGTC
ATTTTTTCCCTAAATCGCCAACAGGTGCCAAATTAGTGATGAAATCTAAA
GTTGTCCTTGACAATTTAGTAAAGACTAAAGAGTGGAATCGGTATTTATT
TTCTTAGCTTATGGGTTTAGAAGAACAACACCACCATCATGGATTTGTTG
TTTATCTGTCAAAAAATGGAAACGGGCATTCAATCGACCACAATGAGGAG
GGCGCATTATTTTCGTGGTTCTTGAAAGAGGACaatgaaggaaaaaaatt
cctTCCTTACCTAAAGGATCGTTTCGCGAGTTATTCTTTATTATTCTTAT
TATTATATAGATGTACAGTTTCAGGCACACTTTGGGCTTCGCGAACCGAT
TCTAATTTTACACAACTTTGTTGCCAGCAAGTTCTCGGCTCTTCGACGTT
TATTGATGGTGCCATCTACGATAAGCATCATCGAAATTACCAATAATACT
GGGAACGAGGGAAACTCAGGGCTCCTGGTATAagtgaatttttatttttc
gatatGCCCATAATTTGCTCTAAACCCGCTAAATTAAGTCTCGACCAACT
CTAAACATTTTCATGCATCGTCCGATTTTTATAATCTAGGCTCGAAAGTA
CACCTTTTTTAATATATTCACCCTAGTTTCGACCTAACCATCATTTATTC
GCGAAAATGTTACTGCTCATCCAAATTAAATCCTGCCTGTTAGTAGGGGG
CTAAATCTTATGATCCTTGACATCTTTTTTGCGATGCAACCAAACCTGGT
TCAATTCAAAGAATAATaattcaaatactttttcgCGAGGGGGGTTTTCT
GCTAAGGCCTGGCAAATTTTTTATGCCCCAAAAACTGACGTGGTCACAGG
CAAAACCCCTTAAGCCCgaaaatttgattggctctCTACTGTACTACTTT
AATGGGGAAACATACAGAAAAACACCAACGGGCAAAGCGGCAACGACGAA
CAGAACATGGAAAACACCAACGGACAAGGCGGCAACGACGAACAGAACAT
AGAAAACACCAACGAACAAAGCCGCAACGACGGATAAAACATAGAAAACA
CGAACGAACAAAGCCGCAACGACGAACAGAACATAGAAAACACCAACGAA
CAAAGCCGCAACGACGGATAAAACATAGAAAACACCAACGGACAAAGCCG
CAACAACGAACAGAACATGGAAAACACCAACGAACAAAGCCGCAACGACG
GACAGAACATAGAAAACACCAACGGACAAAGCCGCAACGACGAACAGAAC
ATAGAAAACACCAACGAACAAAGCCGCAACGACGGATAAAACATAGAAAA
CACGAACGAACAAAGCCGCAACGACGAACAGAACATAGAAAACACCAACG
AACAAAGCCGCAACGACGAACAGAACATAGAAAACACCAACGGAGAAAGT
CGCAATGACGAACAGAACATAGAAAACACCAACGGAAAAAGCCGCAACAA
CGAACAGAACATAGAAAACACCAACGGAGAAAGTCGCAATGACGAACAGA
ACATAGAAAACACCAACGGAAAAAGCGGCAACGACGGATAAAACATAGAA
AACACCAACGAACAAAGCCGCAACGACGGATAAAACATGGAAAACACCAA
CGGACAAAGCCGCAACGACGGATAAAACATAGAAAACACCAACGGGAAAA
GCCGCAACGACGAACAGAACATGGAAAACACCAACAGAGAAAGTCGCAAT
GACGAACAGAACATAGAAAACACCAACGGACAAAGCCGCAACGACGAACA
GAACATAGAAAACACCAACGAACAAAGCCGCAACGACGAACAGAACATAG
AAAACACCAACGGAGAAAGTCGCAATGACGAACAGAACATAGAAAACACC
AACGGACAAAGCCGCAACGACGAACAGAACATAGAAAACACCAACGAACA
AAGCCGCAACGACGAACAGAACATAGAAAACACCAACGGAGAAAGTCGCA
ATGACGAACAGAACATAGAAAACACCAACGGAAAAAGCCGCAACAACGAA
CAGAACATAGAAAACACCAACGGAGAAAGTCGCAATGACGAACAGAACAT
AGAAAACACCAACGGAAAAAGCGGCAACGACGAACAGAACATAGAAAACA
CCAACGGACAAAGCAGCAACGGAGAAGCCAAGAAACGCAAAACGGCAAAT
GGCaaaataagcgaaaaagaaccggaaaagaagtacccccaagagagaga
agaagaaacatAAGGATGTGACCGGGTTGGAGAAAGTTGAGGTAGAGGTG
GAGCTGGATGCTTCCGTTTGTGATCGGAAGTCTCTCGTTGGTAAGTGTGT
AGGTCTCCACACCGAAAACCCAAATGAATATTGGCTCTTC Coding sequence (CDS) from alignment at sc0000107_pilon:171631..174970+ >XLOC_029853 ID=XLOC_029853|Name=XLOC_029853|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000107_pilon:171631..174970+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACGTGTGCTGAATGTGGAGTGAAGCAGAAAAAGGTGGGCAAAACAGC
CATTGATTATAAACCTCTGGGAAAGACATGTCTTACGACGGAGAGGTACA
GAATTCATGGCAGGATGACGTGTGCTGAATGTGGAGTGAAGCAGAAAAAG
GTGGGCAAAACAGCCATTGATTATAAACCTCTGGGAAAGACATGTCTTAC
GACGGAGAGGTACAGAATTCATGGCAGGCTTATGGGTTTAGAAGAACAAC
ACCACCATCATGGATTTGTTGTTTATCTGTCAAAAAATGGAAACGGGCAT
TCAATCGACCACAATGAGGAGGGCGCATTATTTTCGTGGTTCTTGAAAGA
GGACaatgaaggaaaaaaattcctTCCTTACCTAAAGGATCGTTTCGCGA
GTTATTCTCTTATGGGTTTAGAAGAACAACACCACCATCATGGATTTGTT
GTTTATCTGTCAAAAAATGGAAACGGGCATTCAATCGACCACAATGAGGA
GGGCGCATTATTTTCGTGGTTCTTGAAAGAGGACaatgaaggaaaaaaat
tcctTCCTTACCTAAAGGATCGTTTCGCGAGTTATTCTAACATAGAAAAC
ACCAACGGAGAAAGTCGCAATGACGAACAGAACATAGAAAACACCAACGG
AAAAAGCCGCAACAACGAACAGAACATAGAAAACACCAACGGAGAAAGTC
GCAATGACGAACAGAACATAGAAAACACCAACGGAAAAAGCGGCAACGAC
GGATAAAACATAGAAAACACCAACGAACAAAGCCGCAACGACGGATAAAA
CATGGAAAACACCAACGGACAAAGCCGCAACGACGGATAAAACATAGAAA
ACACCAACGGGAAAAGCCGCAACGACGAACAGAACATGGAAAACACCAAC
AGAGAAAGTCGCAATGACGAACAGAACATAGAAAACACCAACGGACAAAG
CCGCAACGACGAACAGAACATAGAAAACACCAACGAACAAAGCCGCAACG
ACGAACAGAACATAGAAAACACCAACGGAGAAAGTCGCAATGACGAACAG
AACATAGAAAACACCAACGGACAAAGCCGCAACGACGAACAGAACATAGA
AAACACCAACGAACAAAGCCGCAACGACGAACAGAACATAGAAAACACCA
ACGGAGAAAGTCGCAATGACGAACAGAACATAGAAAACACCAACGGAAAA
AGCCGCAACAACGAACAGAACATAGAAAACACCAACGGAGAAAGTCGCAA
TGACGAACAGAACATAGAAAACACCAACGGAGAAAGTCGCAATGACGAAC
AGAACATAGAAAACACCAACGGAAAAAGCCGCAACAACGAACAGAACATA
GAAAACACCAACGGAGAAAGTCGCAATGACGAACAGAACATAGAAAACAC
CAACGGAAAAAGCGGCAACGACGGATAAAACATAGAAAACACCAACGAAC
AAAGCCGCAACGACGGATAAAACATGGAAAACACCAACGGACAAAGCCGC
AACGACGGATAAAACATAGAAAACACCAACGGGAAAAGCCGCAACGACGA
ACAGAACATGGAAAACACCAACAGAGAAAGTCGCAATGACGAACAGAACA
TAGAAAACACCAACGGACAAAGCCGCAACGACGAACAGAACATAGAAAAC
ACCAACGAACAAAGCCGCAACGACGAACAGAACATAGAAAACACCAACGG
AGAAAGTCGCAATGACGAACAGAACATAGAAAACACCAACGGACAAAGCC
GCAACGACGAACAGAACATAGAAAACACCAACGAACAAAGCCGCAACGAC
GAACAGAACATAGAAAACACCAACGGAGAAAGTCGCAATGACGAACAGAA
CATAGAAAACACCAACGGAAAAAGCCGCAACAACGAACAGAACATAGAAA
ACACCAACGGAGAAAGTCGCAATGACGAACAGagagagaagaagaaacat
AAGGATGTGACCGGGTTGGAGAAAGTTGAGGTAGAGGTGGAGCTGGATGC
TTCCGTTTGTGATCGGAAGTCTCTCGTTGGTAAGTGTGTAGGTCTCCACA
CCGAAAACCCAAATGAATATTGGCTCTTCagagagaagaagaaacatAAG
GATGTGACCGGGTTGGAGAAAGTTGAGGTAGAGGTGGAGCTGGATGCTTC
CGTTTGTGATCGGAAGTCTCTCGTTGGTAAGTGTGTAGGTCTCCACACCG
AAAACCCAAATGAATATTGGCTCTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:171631..174970 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 967-1113:3194 |
| Aaloc | 295-966:2374 |
| Aaloc | 115-294:1108 |
| Aaloc | 1-114:1 |
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