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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1845853..1849092+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029591 ID=XLOC_029591|Name=XLOC_029591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3240bp|location=Sequence derived from alignment at sc0000049_pilon:1845853..1849092+ (Clytia hemisphaerica_ch_hm2_pilon)
GTACATGGTTCGTTGAATTCTCATTCGACGGATGCAGACTAAATAGCTAT
GGTTTTGTTTGGAGGAAGGAAATCTCAATATTTTCTATTGGTATTGTTGA
GTATTGTACGCATAAATGCTTCAAAATGTTGGCCAAAGGTAAGGAAAGTT
TTTTAGAGTTTGAATAAAGACTCTATCTAGCCTTGATTGGATGACGGCGA
TTAAGTAGCTCGATAGTATATGCATGGTCATTATAATTACATAGTTtctt
tataatgactatggtacATGGGAAATCTCAGTTTTTAGCTTTCGCGCCTG
CGGACTGaaaaaaaGATTCTAGTTGTTTTGCGAATATAAAAgattagact
agcaaactagtatgttaattaatcatgtcagagggcgggaacataaaggc
ggcgggcgtttgctagaataggagctgcgtaggagagcgagcaaaaATTG
GTGAGAGGttgctttcagcccttgccgccgacaaatttttcctacgctta
cctaactcctgcGCTCACTtctcccgcgtgataccgttccagcccgactg
gcgtgccagtctaataAAAGATTCATGTGGCAATGTTTATGTTTGAAAAG
AGGGTATTGCTAAtccttttttgatgtttttttttcgttttttatcaAAC
CCGGGGAGGGGATTCCTTCGATTCCAAAACGTGCAgtgctttttcaaaaa
tggaaaaactttCGGTTTTCGAGGATCCTGTTCGCACTTCCTCATCTtct
gccaaccctagtacccccctggGTTATTTATCTGATAAAGATTTGCATAT
TCACTCAATTCAACTATGTtcgaaatttgattttagtCCATAATAAAATC
CTTTccttcaaaaacacaaagaaaatggaGTGAAGAAGttcaattctatt
ttttttcagattccaGAGAACAATCATGGCATACAGCCAACCACTATAGT
GAATGAAGGTAAGTATTTTTTATATCAATACGTCCTTTTTCTAACAAAga
atgtttttagaaaaagtataaAAGAATACTTTTTCAATGGTACTAAAAAC
CCTTGTCTAACTCTAGTCTAATTGTCTAATTTTAGCTTTcagcaaagatt
tattatacactggatatacagggtgtccctaataaaagtatcgagtttga
acatgcgattgagtagaaagttttaagtgtgtattcacaaaattgtattt
taagctctccctcttttttctttgtcattacgtaacaataaaaacatacc
ctgcctgtttacaaatgcaacgaaattacgatcatgagaaaaacgcaaca
attaaaacatgtttgtaaagaatcgtatgtaaaactatgaaaataataaa
aatggaatgtatggaacaataaaaaagtaaaactaggCAGCGGTAgaaat
tgattaatttatacgttgtaactaccttttgtaatgagcctatgtgatgg
agaacaacgttcttatattttagcgataacacacacaaacttttttactc
aattgcatgttcaaactcgatacttttattagggacaccctgtacaagta
acagatttttgctgatttctcgtgtactagctatgtccgcagtaatgata
gtATTgctcactctccttccctcattaaatggtttttcgaagcattttta
ttgcatttcttatcgaaaaccactcatccaattcccaaaggagacttaaa
actttcctgtgagagtcataTTCTttcacttaattgctaattataagtcg
ttatgacgtttcaagctgtgagaaagatacAAAAGACGtcttgtgtataa
gaaatttaacgttgacaccggaaattttcaaacttcaacctaaaaaaaac
caccttgccaccacgtgcctccaaaggattttcataccacagtggagcca
agacactcaattattatgtatgttaatttcagctcttctgggaacagcct
tggaaagatatttccaattcaaaattttgtgtcactataagcattttggc
TGGATATCTTGtctaaagatatttttctctcattagatttcacaaatgta
tctgGCTTGGAatactagccttactttcaaactcttttttctgcaaatgt
acaaaaagaaagagctagagaactttttaaaaataaggcagataaacatt
tttaaaatcagacatcttcgagccgccatgacagttgtcctttgcggaca
aagctagaacatcaattgttttctgaaacaaaggacatacaatgatcgct
ctccatcgttttatgagtcgtttatccagtgtataataaatctttgcttt
cagatttaataaaaaaacgttggaaattttgaaattgttcaaaaaatgtT
GCGTGCATAACTAGTGACACGTCCCTTTAAATCCTATTTTCCTGAATAAC
TCTCCCCCAGAGGACACtgttgtaatatttttaacatttttttttcagcc
gAAGATCTACAGCCAAACAATTTACTTCTTTTCATTCCAATTCTATCCAA
TGAATGGATTGTacaattacatttcaaaattctTACCGAGCATGCTGGTG
GAAGCAATTGGTGTAATATAATACATGTCACAAAGggtcaaaacaatttt
gtttaCGGAGATCGAACACCAGCCACCTTCTTTAATAaggtgaaaaagtt
tttgaaaaaaatctttatcaacCCTTCAAcgccaaaataaaatttctgcC
TCATTGAAATCTTATTCATTTTCACAATTATCCAAAATCACctataattt
ttgtttgaagcaCTAAATTCTAGGCAGAGAAAAAACCTTCTGCAATGtgc
caaaattaattcaaaaatactttaaaaaaaactttaaattaatatttctt
tGATTCCTTCCTTCTTCTCGCCGAATTAGTTCACGCCATTTAACTTATTT
GCTTTTTACTTTCAGACGgactgtattttttatttaatcatatttgaaaa
atctttaggCAACTTCGCTACTAAGTATAGGATCGGCAGTGAATGGCAGC
AAAAATTACGCTCGGTATCTAACAGTCCAATACAACACCGAATACAATGT
GGAGATTCACCAGCGATACAAAAGTGGAGGTGTTTACAAATATTCCACTC
TTCTCAATGGAGAAGAAATTCACTCAACAGATAATACACAAGCTCAACAA
TTTTATGACATGAAAGTTTACATTTCCGATCCTTGGCTTCCGGCATGCAA
TGGTTGGattaaatatatcaaaattactaactttttataa Coding sequence (CDS) from alignment at sc0000049_pilon:1845853..1849092+ >XLOC_029591 ID=XLOC_029591|Name=XLOC_029591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1320bp|location=Sequence derived from alignment at sc0000049_pilon:1845853..1849092+ (Clytia hemisphaerica_ch_hm2_pilon)
GTACATGGTTCGTTGAATTCTCATTCGACGGATGCAGACTAAATAGCTAT
GGTTTTGTTTGGAGGAAGGAAATCTCAATATTTTCTATTGGTATTGTTGA
GTATTGTACGCATAAATGCTTCAAAATGTTGGCCAAAGGTACATGGTTCG
TTGAATTCTCATTCGACGGATGCAGACTAAATAGCTATGGTTTTGTTTGG
AGGAAGGAAATCTCAATATTTTCTATTGGTATTGTTGAGTATTGTACGCA
TAAATGCTTCAAAATGTTGGCCAAAGattccaGAGAACAATCATGGCATA
CAGCCAACCACTATAGTGAATGAAGattccaGAGAACAATCATGGCATAC
AGCCAACCACTATAGTGAATGAAGccgAAGATCTACAGCCAAACAATTTA
CTTCTTTTCATTCCAATTCTATCCAATGAATGGATTGTacaattacattt
caaaattctTACCGAGCATGCTGGTGGAAGCAATTGGTGTAATATAATAC
ATGTCACAAAGggtcaaaacaattttgtttaCGGAGATCGAACACCAGCC
ACCTTCTTTAATAagccgAAGATCTACAGCCAAACAATTTACTTCTTTTC
ATTCCAATTCTATCCAATGAATGGATTGTacaattacatttcaaaattct
TACCGAGCATGCTGGTGGAAGCAATTGGTGTAATATAATACATGTCACAA
AGggtcaaaacaattttgtttaCGGAGATCGAACACCAGCCACCTTCTTT
AATAaggCAACTTCGCTACTAAGTATAGGATCGGCAGTGAATGGCAGCAA
AAATTACGCTCGGTATCTAACAGTCCAATACAACACCGAATACAATGTGG
AGATTCACCAGCGATACAAAAGTGGAGGTGTTTACAAATATTCCACTCTT
CTCAATGGAGAAGAAATTCACTCAACAGATAATACACAAGCTCAACAATT
TTATGACATGAAAGTTTACATTTCCGATCCTTGGCTTCCGGCATGCAATG
GTTGGattaaatatatcaaaattactaactttttataagCAACTTCGCTA
CTAAGTATAGGATCGGCAGTGAATGGCAGCAAAAATTACGCTCGGTATCT
AACAGTCCAATACAACACCGAATACAATGTGGAGATTCACCAGCGATACA
AAAGTGGAGGTGTTTACAAATATTCCACTCTTCTCAATGGAGAAGAAATT
CACTCAACAGATAATACACAAGCTCAACAATTTTATGACATGAAAGTTTA
CATTTCCGATCCTTGGCTTCCGGCATGCAATGGTTGGattaaatatatca
aaattactaactttttataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1845853..1849092 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 379-660:2959 |
| Aaloc | 190-378:2451 |
| Aaloc | 139-186:910 |
| Aaloc | 1-138:1 |
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