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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:46642..49452+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_029544 ID=XLOC_029544|Name=XLOC_029544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2811bp|location=Sequence derived from alignment at sc0000083_pilon:46642..49452+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcaTCTACTTTTGGATCCAAATCCATTGGTGAAAAAGACTGGAAAGC
ACACGGCCACAATGTTGCAACAAATTCTAATACTGTGACAGCAAAATCAA
GGTGCTCATTgtcattatttcttttttttgaattctcaaTTACTCTGAAC
AACCAGTTTTCTTGAAGAACTAGAGTTGAAGAACTAGAGAATTTTAAAAA
GGTCCTATACTGGTGTCACTTTTTACATAGCTAATAACTACCCCAAGGGA
ACTTGCACgattttaattaaattaaattttaatttaattttagtaagagc
tttttcagctagtaatgtaaagtaatAGTGTTGTAAGCTAGTTATTATGT
AAATTTTGGGAAGAACTATTTTTGGTGTGGTAtcatctttaattttaatt
ttgtgcAAATATGGTTTGGGTCCAAATTAGTTTCCTTAATAAGGTAGAAG
TGGGTCAAAATGGGAATTACAAAACGCAATAACTATTTTTCACACTAAAA
ATAAGAAGTAAGCTATTCAAACAAATACAAATATAATTTCAATCAAacag
taaaaattttgaatttctcatTTTCCTTCAGGCCACCTGGACCTGATTGG
ACATCAAGTTTGAGGTGTATCAAACAAGACAATGTGATTTATCCAAATGA
TGAACCTGTTCTTCGCCAGGGGATGAGACCATTCCTTCGTGAGTATCCCA
AATACTCTCTTCTTTGTTTCATTTGTCCTTAATCCCTGTCAAGTTTTTCT
TACTATTCCTCATCTTATTTGTGTTCATTCACAAAAAATCAGGCgtaaaa
cttttcaatttcaaaattagcAGATGttaagttgaaatattttatgaccC
TGTCACTTAAAATGAGCCCTTAAGTTACACTTTCAACACGTCAGAATTTT
TCAATTAACTAACCACCGTGGGAAACCATCCATTATCATAGCTAATAAAA
CTGAACTTGATGAATTTGCCAAGGGTCATTGACCTTATAGTATTTCCTCA
ATCATTGTATTAGATAAGAATGAACAAAGTCTGGAAGAATGGGCTTATTA
CAGAGACGGATCAAGAAATGGCAAACGTTGTATCATCAATGGTAAACGCC
AAGGGAACGTCCAATCGATCAATGAGATAAGCGTCGAAAGCACCATTGGG
AATAGATCAAAAGGTACGTTTTGATTAGATAGTGTGTTTAGGGGTTTCTG
CCCCTAACTTccttccttttcaaaaaatgcttcGACCcctaaaaaatgtt
ttggtgcCTTCTTAAACCTTTAATCTAGCATAAATTATTCCCTAACTAAC
CATTGAAATGGACTTATCAAATCTTAAAACGGTTGAAAGTGCATGCATTT
TTTATAATCAAAAGAACACAAAAACACGACAAAATCGAAGGATTTTAATC
ACagtaattaaaattttcatatgaTTTACAAATCCATCAAGGTACGCATT
ATTATTTTATGATAgttgttcttaatttcttcCTTTTCGTACTCGGTAAT
CTAGTTCCTGACCCTCGTGGCGGAGTCGATAGCCTTACAGCAGGAGACAA
AAGTTATGCAGTGCCTGAATTTTCGAAAGGATTCCATAAAGAAGGTTCAA
CGCTACCCGCTGTTAATTTTAGGTAGAGTCCGGTCAATTCACTTAATTTT
TATATTCAGTTGatttttttagtttcttcgTCGTACTTGAAGCTCGTGCC
CTTCTTATCTGGCACtcaatgtagaaattttctgAAGGTTGGGGTGATTT
TCAGCATCTGGAAGGTTTATATTACGGATTTCGCCTGACCGTATCGAAAG
ATTTTGCAGCGAGAGGCCTGAATCTCAGCTCTTGTTTTAGGGAATTGGCG
agtccaaccaaaatattttcacaagGAATCCACAAGGGCCGTTGAGCTTG
ACTGGGACTTAGCACATCataggccgactatcattcctctccgatgggaa
ttTTTCCCGCCCCTTTAGACCTTTAGACTAGGCAGCCGCCAATCCGCCTT
CGGAATTATCAGATAAGCATATTCGGCGCCCATTAAACTTTTctagccaa
tgaaaaaaatgaacttcatCAAAATGATTATCTTACAAAACTATTGCCAA
CGCCGCATGATTGTTTGAGGACCTGGAGACAGGTTccgtttcattttctt
ctttttcaatttttcacagcCGGTCCAATAAAATCGTGACAGATACTTTC
ATTCCTCTGCAACCACTTCCACAACATAAAAGGTTTGGAAACTCTCGTTT
TGTTACGTTAGCATGTTCTCTGCCGAGcctttttcagaaatcgaaatTTC
GACATCTTAGAATTTtatcgaaagtttgactttcagaggcTCCTGTGGCC
TGAGTGACCTTCaaatatataccaatcgacgtagatttttacaaaaatgc
aataaaaaaaccAAGCAATAGGttctatatcaaaagttatggctctTTAA
CGTACTACCGGTATTTTGACCCATCTACCACGAGAATACTCGTAGCTTGT
AGCGAACGTgttaaatttagattttttttatttagttaCGTACCTTCCAC
CTGCTTCCAccattataaaagaaaatattcGATTTGCATCAGCTATCTTC
TCTgcaaattcgaacgttttattCTCTTTTGCAAAACTTGAAAACGTTTT
AGTCAGTGGATATAACTTTTGTatgcatttttttcattcaaagcaTATCT
TACAAGGAGAAAGAGGTGGTCCGTAAAAAGAATCACGAAGTTTTGGAAGT
GGAAGGGCTTGACAAATGGGATCCAGCGCCGGCTTTAACACCCGGAGttt
tcaaacattga Coding sequence (CDS) from alignment at sc0000083_pilon:46642..49452+ >XLOC_029544 ID=XLOC_029544|Name=XLOC_029544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000083_pilon:46642..49452+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcaTCTACTTTTGGATCCAAATCCATTGGTGAAAAAGACTGGAAAGC
ACACGGCCACAATGTTGCAACAAATTCTAATACTGTGACAGCAAAATCAA
GatgtcaTCTACTTTTGGATCCAAATCCATTGGTGAAAAAGACTGGAAAG
CACACGGCCACAATGTTGCAACAAATTCTAATACTGTGACAGCAAAATCA
AGGCCACCTGGACCTGATTGGACATCAAGTTTGAGGTGTATCAAACAAGA
CAATGTGATTTATCCAAATGATGAACCTGTTCTTCGCCAGGGGATGAGAC
CATTCCTTCGCCACCTGGACCTGATTGGACATCAAGTTTGAGGTGTATCA
AACAAGACAATGTGATTTATCCAAATGATGAACCTGTTCTTCGCCAGGGG
ATGAGACCATTCCTTCATAAGAATGAACAAAGTCTGGAAGAATGGGCTTA
TTACAGAGACGGATCAAGAAATGGCAAACGTTGTATCATCAATGGTAAAC
GCCAAGGGAACGTCCAATCGATCAATGAGATAAGCGTCGAAAGCACCATT
GGGAATAGATCAAAAGATAAGAATGAACAAAGTCTGGAAGAATGGGCTTA
TTACAGAGACGGATCAAGAAATGGCAAACGTTGTATCATCAATGGTAAAC
GCCAAGGGAACGTCCAATCGATCAATGAGATAAGCGTCGAAAGCACCATT
GGGAATAGATCAAAAGTTCCTGACCCTCGTGGCGGAGTCGATAGCCTTAC
AGCAGGAGACAAAAGTTATGCAGTGCCTGAATTTTCGAAAGGATTCCATA
AAGAAGGTTCAACGCTACCCGCTGTTAATTTTAGTTCCTGACCCTCGTGG
CGGAGTCGATAGCCTTACAGCAGGAGACAAAAGTTATGCAGTGCCTGAAT
TTTCGAAAGGATTCCATAAAGAAGGTTCAACGCTACCCGCTGTTAATTTT
AGcCGGTCCAATAAAATCGTGACAGATACTTTCATTCCTCTGCAACCACT
TCCACAACATAAAAGcCGGTCCAATAAAATCGTGACAGATACTTTCATTC
CTCTGCAACCACTTCCACAACATAAAAGcaTATCTTACAAGGAGAAAGAG
GTGGTCCGTAAAAAGAATCACGAAGTTTTGGAAGTGGAAGGGCTTGACAA
ATGGGATCCAGCGCCGGCTTTAACACCCGGAGttttcaaacattgacaTA
TCTTACAAGGAGAAAGAGGTGGTCCGTAAAAAGAATCACGAAGTTTTGGA
AGTGGAAGGGCTTGACAAATGGGATCCAGCGCCGGCTTTAACACCCGGAG
ttttcaaacattga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:46642..49452 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 541-657:2695 |
| Aaloc | 478-537:2171 |
| Aaloc | 361-474:1507 |
| Aaloc | 211-357:1016 |
| Aaloc | 103-207:583 |
| Aaloc | 1-99:1 |
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