XLOC_027904 (mRNA) -

Overview
NameXLOC_027904
Unique NameXLOC_027904
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000255_pilon:436855..438063+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027904 ID=XLOC_027904|Name=XLOC_027904|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1209bp|location=Sequence derived from alignment at sc0000255_pilon:436855..438063+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGAGCAATTTAATAAAAacacttaataagaactttttgaaagagtatgt aatgtatttaatttttatgtttcagatgaaaaaaattgttaaccTTATTC TTTTTCAAGTAATTTGCTATATACTGTGCCATGGTTTTGAACTAAATAAT GAAGAGTTTTATTACAAAGGATGTGAATCAGTTGTTGATAATTCACATGA TATACCAGGTTCTGATGTCAAGTATTTCAGTTTTGTATTTAACTCAACAA TTAAAGATACAGAATACAAAATACTGCTCTGTAGAGAAGATATATCTGCT CAATGTCAACAGGAAGTAAATATCTCTCAAGTATCTCAAATTATTGAATG TGAGAatgagaagaaaaataaacgaaTAGTTTGCCCTGTAGTCAAAGGTT TTATACATGGACCTATTTATAGGGGTGAATcattgaaactgaaaatattc ataTATAGCATTAATGAGTCACAAACAAACTTGATGATTGTAAAGTCTTT TCAGTATGCAGAATGTAATGTACGTGGATGTAAAGACTACAAACCAGCCC TCGAAATCGACACTAATAGATTTCAATATTCATTCCAGAAAAATCAGTTG AAGTTTGGATTATCAAATCTTCCTTCAGAACCTTATAAACAATACAATCA GTATTATTTCACTGTTACTTTGTCAAATGTGAACTCTGATCAATCAATTA TATTCAGGAATATCACAAAAATGAGATCCATAAATTTAAAAGAGCAGTTT ACTTATGATGCAAAAAGCTGTTTAtctcattttgataaaatttgcaTCAC TTCAAATTGGGATTATTGTAGTGGACCTCACAAAAGTATCCGGACATCAA ATACAACATGTAAACCATTTTCGTATCAAAACTTCTTCCCAAAAGTAGAA TTTAGCCTGGTAAAACCAAATCAAATAGAATTTCTAGTTGATGAATACAA TGACTCAATCTTTCACTTTATGGTTAAAAAATTCAACAGCAATGGCAAGG TGTTAATGTCTTCAAAAAATACAACCAAAATGATCCTGAAAAGAAATGTC ACATATAATATGTATTATGAAGTTGGATTATGTGATAAATGCGCATGTGG TAAATTATCTACTGTACCACAAAAAGAAGCAATAATCCCAGAAACGAATC AAAATACACGTAGGACAGATATTGGAATGATTCTTGGTATTATTTTGGGA ATATCTGGT

Coding sequence (CDS) from alignment at sc0000255_pilon:436855..438063+

>XLOC_027904 ID=XLOC_027904|Name=XLOC_027904|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2418bp|location=Sequence derived from alignment at sc0000255_pilon:436855..438063+ (Clytia hemisphaerica_ch_hm2_pilon)
GAGAGCAATTTAATAAAAacacttaataagaactttttgaaagagtatgt
aatgtatttaatttttatgtttcagatgaaaaaaattgttaaccTTATTC
TTTTTCAAGTAATTTGCTATATACTGTGCCATGGTTTTGAACTAAATAAT
GAAGAGTTTTATTACAAAGGATGTGAATCAGTTGTTGATAATTCACATGA
TATACCAGGTTCTGATGTCAAGTATTTCAGTTTTGTATTTAACTCAACAA
TTAAAGATACAGAATACAAAATACTGCTCTGTAGAGAAGATATATCTGCT
CAATGTCAACAGGAAGTAAATATCTCTCAAGTATCTCAAATTATTGAATG
TGAGAatgagaagaaaaataaacgaaTAGTTTGCCCTGTAGTCAAAGGTT
TTATACATGGACCTATTTATAGGGGTGAATcattgaaactgaaaatattc
ataTATAGCATTAATGAGTCACAAACAAACTTGATGATTGTAAAGTCTTT
TCAGTATGCAGAATGTAATGTACGTGGATGTAAAGACTACAAACCAGCCC
TCGAAATCGACACTAATAGATTTCAATATTCATTCCAGAAAAATCAGTTG
AAGTTTGGATTATCAAATCTTCCTTCAGAACCTTATAAACAATACAATCA
GTATTATTTCACTGTTACTTTGTCAAATGTGAACTCTGATCAATCAATTA
TATTCAGGAATATCACAAAAATGAGATCCATAAATTTAAAAGAGCAGTTT
ACTTATGATGCAAAAAGCTGTTTAtctcattttgataaaatttgcaTCAC
TTCAAATTGGGATTATTGTAGTGGACCTCACAAAAGTATCCGGACATCAA
ATACAACATGTAAACCATTTTCGTATCAAAACTTCTTCCCAAAAGTAGAA
TTTAGCCTGGTAAAACCAAATCAAATAGAATTTCTAGTTGATGAATACAA
TGACTCAATCTTTCACTTTATGGTTAAAAAATTCAACAGCAATGGCAAGG
TGTTAATGTCTTCAAAAAATACAACCAAAATGATCCTGAAAAGAAATGTC
ACATATAATATGTATTATGAAGTTGGATTATGTGATAAATGCGCATGTGG
TAAATTATCTACTGTACCACAAAAAGAAGCAATAATCCCAGAAACGAATC
AAAATACACGTAGGACAGATATTGGAATGATTCTTGGTATTATTTTGGGA
ATATCTGGTGAGAGCAATTTAATAAAAacacttaataagaactttttgaa
agagtatgtaatgtatttaatttttatgtttcagatgaaaaaaattgtta
accTTATTCTTTTTCAAGTAATTTGCTATATACTGTGCCATGGTTTTGAA
CTAAATAATGAAGAGTTTTATTACAAAGGATGTGAATCAGTTGTTGATAA
TTCACATGATATACCAGGTTCTGATGTCAAGTATTTCAGTTTTGTATTTA
ACTCAACAATTAAAGATACAGAATACAAAATACTGCTCTGTAGAGAAGAT
ATATCTGCTCAATGTCAACAGGAAGTAAATATCTCTCAAGTATCTCAAAT
TATTGAATGTGAGAatgagaagaaaaataaacgaaTAGTTTGCCCTGTAG
TCAAAGGTTTTATACATGGACCTATTTATAGGGGTGAATcattgaaactg
aaaatattcataTATAGCATTAATGAGTCACAAACAAACTTGATGATTGT
AAAGTCTTTTCAGTATGCAGAATGTAATGTACGTGGATGTAAAGACTACA
AACCAGCCCTCGAAATCGACACTAATAGATTTCAATATTCATTCCAGAAA
AATCAGTTGAAGTTTGGATTATCAAATCTTCCTTCAGAACCTTATAAACA
ATACAATCAGTATTATTTCACTGTTACTTTGTCAAATGTGAACTCTGATC
AATCAATTATATTCAGGAATATCACAAAAATGAGATCCATAAATTTAAAA
GAGCAGTTTACTTATGATGCAAAAAGCTGTTTAtctcattttgataaaat
ttgcaTCACTTCAAATTGGGATTATTGTAGTGGACCTCACAAAAGTATCC
GGACATCAAATACAACATGTAAACCATTTTCGTATCAAAACTTCTTCCCA
AAAGTAGAATTTAGCCTGGTAAAACCAAATCAAATAGAATTTCTAGTTGA
TGAATACAATGACTCAATCTTTCACTTTATGGTTAAAAAATTCAACAGCA
ATGGCAAGGTGTTAATGTCTTCAAAAAATACAACCAAAATGATCCTGAAA
AGAAATGTCACATATAATATGTATTATGAAGTTGGATTATGTGATAAATG
CGCATGTGGTAAATTATCTACTGTACCACAAAAAGAAGCAATAATCCCAG
AAACGAATCAAAATACACGTAGGACAGATATTGGAATGATTCTTGGTATT
ATTTTGGGAATATCTGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027904XLOC_027904-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000255_pilongenomesc0000255_pilon:436855..438063 +
Properties
Property NameValue
Aaloc1-1209:1