XLOC_027507.4 (mRNA) -

Overview
NameXLOC_027507.4
Unique NameXLOC_027507.4
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000345_pilon:177542..178175-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_027507.4 ID=XLOC_027507.4|Name=XLOC_027507.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=634bp|location=Sequence derived from alignment at sc0000345_pilon:177542..178175- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAAACATAGCTCAGAGGTAGCAAAGGTCCATTATAAGAAAAAACAGTC
AAGAATTGTGGCAACGGAGGGGAAAAGATGCATGGAAAAAATGCTTGGAG
ACGCACGAAAGGACCAACAACAAGCCATTTCAGGTATGTATACCGAGTTT
GTCGTTCTACATCTGTAATTATACGTCAATCGATACTTCGGTTAGCAGCC
GTATCGAGAGAGAAAGAGAGTAGTATATGTGGTAGTGTGAAGGGTTCGAG
CACAGACTTGCACCGCAAAGGACTGTGTTCGAATCCCATGCACTTCCAGG
CAGGATTTATTTTATGGTGAAAGATTCACTAACTTCACTTATAATTTCAG
GTATATTCAAAGATTTGGCTGAAATATCCAAATTTCCATCGATGAGCGTG
GCAAGTGAAAAAGCAGGACCATCGACAAGCAATGTAGCTTCGCCTTATGT
GGTAAACTCTGACGAAGATATGCTTGATTCTGAGAGCATCGAAAGACAAA
GTATAGAAGTTAATACTATTTTGCAACGAGTTCAAAACATGTGTTCGCCG
GATGATAACGCAAATCTTGACGACAGTGAGGGTATCCAAATGGAAGTAGT
GAGATCAGTGGATGAAGAAGCACCCGTCACATTG

Coding sequence (CDS) from alignment at sc0000345_pilon:177542..178175-

>XLOC_027507.4 ID=XLOC_027507.4|Name=XLOC_027507.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=834bp|location=Sequence derived from alignment at sc0000345_pilon:177542..178175- (Clytia hemisphaerica_ch_hm2_pilon)
CAAAAACATAGCTCAGAGGTAGCAAAGGTCCATTATAAGAAAAAACAGTC
AAGAATTGTGGCAACGGAGGGGAAAAGATGCATGGAAAAAATGCTTGGAG
ACGCACGAAAGGACCAACAACAAGCCATTTCAGCAAAAACATAGCTCAGA
GGTAGCAAAGGTCCATTATAAGAAAAAACAGTCAAGAATTGTGGCAACGG
AGGGGAAAAGATGCATGGAAAAAATGCTTGGAGACGCACGAAAGGACCAA
CAACAAGCCATTTCAGGTATATTCAAAGATTTGGCTGAAATATCCAAATT
TCCATCGATGAGCGTGGCAAGTGAAAAAGCAGGACCATCGACAAGCAATG
TAGCTTCGCCTTATGTGGTAAACTCTGACGAAGATATGCTTGATTCTGAG
AGCATCGAAAGACAAAGTATAGAAGTTAATACTATTTTGCAACGAGTTCA
AAACATGTGTTCGCCGGATGATAACGCAAATCTTGACGACAGTGAGGGTA
TCCAAATGGAAGTAGTGAGATCAGTGGATGAAGAAGCACCCGTCACATTG
GTATATTCAAAGATTTGGCTGAAATATCCAAATTTCCATCGATGAGCGTG
GCAAGTGAAAAAGCAGGACCATCGACAAGCAATGTAGCTTCGCCTTATGT
GGTAAACTCTGACGAAGATATGCTTGATTCTGAGAGCATCGAAAGACAAA
GTATAGAAGTTAATACTATTTTGCAACGAGTTCAAAACATGTGTTCGCCG
GATGATAACGCAAATCTTGACGACAGTGAGGGTATCCAAATGGAAGTAGT
GAGATCAGTGGATGAAGAAGCACCCGTCACATTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_027507.4XLOC_027507.4-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345_pilongenomesc0000345_pilon:177542..178175 -
Properties
Property NameValue
Aaloc136-417:283
Aaloc1-132:635