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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:419112..421762+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026763 ID=XLOC_026763|Name=XLOC_026763|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2651bp|location=Sequence derived from alignment at sc0000248_pilon:419112..421762+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGGTAAGTTTATGAACAAAAAGTTCTTCCATCCTTCTTCTTATCC
caaccaaaaacAaaaatggaTCCACCAGCAACGAGCAGATGCAAAAGAGA
AGCAGGAAAACGAGAAGAAAGAGACGTACATGAAAGAGCAAGAATCTTAT
CAAAGTCGAATGCTGTCCGCCAAAACTAAAGAAGAGAAGATgaaattaga
tttgaattttttgtacgATGTTCCACCAGGTATGAAGAAAGATGATccaa
atgaagaagaagaagtggAGGTTTGTCTTGCAAAGTTCATTTTCTTTATA
CTTTTCTGGTTCATGCTCTCCACTCATGCTGAACTTGGATACTACTCTTA
GTTTATTCCTGCAAAAATTAAACATACTTTGATTTTTGGCCACAAGATCA
TGGCGGGTGCAAAATTGTAAAGTTGAAGAATTCTTCATTTCCTAATTTTC
TCTAGGTGTTGACTAGGAAAAGCCAAGTTGAATCTCATCATGGGtgataa
acaaatttcaccCtttttttGGATACATGTTAACCTTTAgccgccgagag
acgtaccacgtacgtcatatatacaggccgagagacgtaccacgtacgtt
ttgatactggggtcctttcaaagtttaataaaataaagaccagtttgaat
ttttcaattctgtaaaatttagcagacaggataggggtgaaggttcattt
tttaaaaattttacgggtcctgcttttatacatctcgagatatcggaact
caatgtcggtgtatttttcaaatgtcaacaaaacatcgttttagtggtgg
acagagggtgtttgatggatttttggactgaaaagtcatgtttatgtctg
gttttttcttggtttcagcatataaatatcattatatgagatagagaacc
tttattggcagtttctatgtggtttgaaggggttttagggggtatttcct
gacatacatgcctatctctagctccaacaactcagggctgttttgcctca
gtttttccactattctggtgttttattgcttgaatttacatgatagagag
tctgttataattattgtagtaattttacaggcttagggtaagtgcagggc
caattttagagcaacgggaccacttattttacctgttgtggccagagtgt
cgattttggtggaaaagtgtgcttcaccgaaacttagattctgagatgaa
atgagcttcttcagccctgaaatttcacacaatggtggcttataacataa
actaaaacaaaataatttttctgggaccaatctttaccatgtacccactt
ttttcattcaatttgtcaaaaaaaagaaaaaaagtgaaaaaatcgtaaac
atggaatttttactgttttgatttgaggctgtgtagtcaggtttaaaagg
gtgatgaggcgtctttttggtattatctgaaaaaatagatccttagcttt
tcaaaatgggtttactttttacttaagctttagcggttcagattttatga
cattttccgcgaaacctccattttcatgaaaaaaacagcggcagcagcgc
gcgctgtttttaaaaacagcggtggCTAAAGGTTAAGGTTGGGTTAAAAC
TGGATTGAAAATGGGACTGAATTTCTGAAGACTGAATTCCTGAAGACTGA
AGTGCTTTACTGATAAGATATCAgtaatcaaaatttgaatactATCAGTT
CAGATCAAAGTGATTACCAGAcacaattccttattttcacCAAGATTTAA
CTTATTTTACTTCCAGGTTAAATTTGAATGGCAGAAAAATGCCCCACGAT
CCAAATATCTCAAAGATTTAGGTCTTGCATGTCAAGATCAACCATTTGGA
ATTTGTGTAAAAAATATTCGTTGTTTCAAATGCAGACAATGGGGCCATCA
GAACACTGATCGTGAATGTCCTCTGTTCTTTTCCAATATGCCATCTGATG
GCTCTACTGGCAAAAGTCAAGCAGACAGTTTGCGCTTAAGTGATCCATTG
AGACTTGTGGCAGATATGAAAAAGCAGCATGGTATCACGCTaaaaaaaTC
AGTGATTGGTCAAGAAATTGATCCAATGGCAGAACACAATCAACTTCTTG
AAAGTGACGACGAtgataaacAAaaaaaatcaaaagaaaaaaactcactT
GTTGATAATGATTTGCAATACATAGCATCATTGAGTAACAAAGAGAAAAA
GAAACTATTGAAAACTTTGAACAAGTTTGAGAAATCtgtcaataaaaaga
aaaaaagaaaaagaaaaagaaggaacAGTGAGGATGGAAGTAGCGAAAAT
GAGTGGATGGAAACCAAACCAAAATTACcaaggagaaaacaaaaaagaca
tAGAAGTAGCCGTTCACCATCCTTAAGTGAAGAGGATAGAAAATATCAGA
AGAAACATAAACAGAGGGGCAATAGGAATGTACATAGAGAAGATAAAAGA
AGGACGAGACATGAACGTGACTTTAGCGAAGGAAGATACTCTGATACTGA
ATATCGTCGTGAAAGAAGACATAGAAGAGAATCTAGGGATACGTACCCAA
GGGGAGATTTTGACAATATTGATGGAGAAAGAACTCATCGTAGAAATGAT
GATGACAGAATAAGCAGGATGATCAGTGAATGCCGTGGCTCACAGAAATg
a Coding sequence (CDS) from alignment at sc0000248_pilon:419112..421762+ >XLOC_026763 ID=XLOC_026763|Name=XLOC_026763|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2310bp|location=Sequence derived from alignment at sc0000248_pilon:419112..421762+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGGTAAGTTTATGAACAAAAAGTTCTTCCATCCTTCTTCTTATCC
caaccaaaaacAaaaatggaTCCACCAGCAACGAGCAGATGCAAAAGAGA
AGCAGGAAAACGAGAAGAAAGAGACGTACATGAAAGAGCAAGAATCTTAT
CAAAGTCGAATGCTGTCCGCCAAAACTAAAGAAGAGAAGATgaaattaga
tttgaattttttgtacgATGTTCCACCAGGTATGAAGAAAGATGATccaa
atgaagaagaagaagtggAGATGTTTGGTAAGTTTATGAACAAAAAGTTC
TTCCATCCTTCTTCTTATCCcaaccaaaaacAaaaatggaTCCACCAGCA
ACGAGCAGATGCAAAAGAGAAGCAGGAAAACGAGAAGAAAGAGACGTACA
TGAAAGAGCAAGAATCTTATCAAAGTCGAATGCTGTCCGCCAAAACTAAA
GAAGAGAAGATgaaattagatttgaattttttgtacgATGTTCCACCAGG
TATGAAGAAAGATGATccaaatgaagaagaagaagtggAGGTTAAATTTG
AATGGCAGAAAAATGCCCCACGATCCAAATATCTCAAAGATTTAGGTCTT
GCATGTCAAGATCAACCATTTGGAATTTGTGTAAAAAATATTCGTTGTTT
CAAATGCAGACAATGGGGCCATCAGAACACTGATCGTGAATGTCCTCTGT
TCTTTTCCAATATGCCATCTGATGGCTCTACTGGCAAAAGTCAAGCAGAC
AGTTTGCGCTTAAGTGATCCATTGAGACTTGTGGCAGATATGAAAAAGCA
GCATGGTATCACGCTaaaaaaaTCAGTGATTGGTCAAGAAATTGATCCAA
TGGCAGAACACAATCAACTTCTTGAAAGTGACGACGAtgataaacAAaaa
aaatcaaaagaaaaaaactcactTGTTGATAATGATTTGCAATACATAGC
ATCATTGAGTAACAAAGAGAAAAAGAAACTATTGAAAACTTTGAACAAGT
TTGAGAAATCtgtcaataaaaagaaaaaaagaaaaagaaaaagaaggaac
AGTGAGGATGGAAGTAGCGAAAATGAGTGGATGGAAACCAAACCAAAATT
ACcaaggagaaaacaaaaaagacatAGAAGTAGCCGTTCACCATCCTTAA
GTGAAGAGGATAGAAAATATCAGAAGAAACATAAACAGAGGGGCAATAGG
AATGTACATAGAGAAGATAAAAGAAGGACGAGACATGAACGTGACTTTAG
CGAAGGAAGATACTCTGATACTGAATATCGTCGTGAAAGAAGACATAGAA
GAGAATCTAGGGATACGTACCCAAGGGGAGATTTTGACAATATTGATGGA
GAAAGAACTCATCGTAGAAATGATGATGACAGAATAAGCAGGATGATCAG
TGAATGCCGTGGCTCACAGAAATgaGTTAAATTTGAATGGCAGAAAAATG
CCCCACGATCCAAATATCTCAAAGATTTAGGTCTTGCATGTCAAGATCAA
CCATTTGGAATTTGTGTAAAAAATATTCGTTGTTTCAAATGCAGACAATG
GGGCCATCAGAACACTGATCGTGAATGTCCTCTGTTCTTTTCCAATATGC
CATCTGATGGCTCTACTGGCAAAAGTCAAGCAGACAGTTTGCGCTTAAGT
GATCCATTGAGACTTGTGGCAGATATGAAAAAGCAGCATGGTATCACGCT
aaaaaaaTCAGTGATTGGTCAAGAAATTGATCCAATGGCAGAACACAATC
AACTTCTTGAAAGTGACGACGAtgataaacAAaaaaaatcaaaagaaaaa
aactcactTGTTGATAATGATTTGCAATACATAGCATCATTGAGTAACAA
AGAGAAAAAGAAACTATTGAAAACTTTGAACAAGTTTGAGAAATCtgtca
ataaaaagaaaaaaagaaaaagaaaaagaaggaacAGTGAGGATGGAAGT
AGCGAAAATGAGTGGATGGAAACCAAACCAAAATTACcaaggagaaaaca
aaaaagacatAGAAGTAGCCGTTCACCATCCTTAAGTGAAGAGGATAGAA
AATATCAGAAGAAACATAAACAGAGGGGCAATAGGAATGTACATAGAGAA
GATAAAAGAAGGACGAGACATGAACGTGACTTTAGCGAAGGAAGATACTC
TGATACTGAATATCGTCGTGAAAGAAGACATAGAAGAGAATCTAGGGATA
CGTACCCAAGGGGAGATTTTGACAATATTGATGGAGAAAGAACTCATCGT
AGAAATGATGATGACAGAATAAGCAGGATGATCAGTGAATGCCGTGGCTC
ACAGAAATga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248_pilon | genome | sc0000248_pilon:419112..421762 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 271-1155:1767 |
| Aaloc | 1-270:1 |
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