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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:767195..772578- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026410 ID=XLOC_026410|Name=XLOC_026410|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5384bp|location=Sequence derived from alignment at sc0000135_pilon:767195..772578- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAAGCATATGTGATGCACTATTCAATGGTTTTGTCAGCCAACAAGG
AATTGGAGCTGATCAACATTTCTGTGCAGAAACAATTAGTAAATATAATT
GACTCTTTTTAGCTCCCGGGGAAGGTACGGGGACGTGCCACTGGGCAGGG
TCCCTATTTTAGGCTCTGAAGCTATCTGACAGGGTCCAAAATTTACTAAT
TTTCGAGATGTGCGTCTGACAGGATCTACTTTTCGAACTTTTCGAAGCAA
CACGTCCCCGTCGGCCATGGTAAGCAATCTTTCAGTTTGAAATTCAGAAA
GATTCGAATAATAGAGGTTCGAATTGGAGAGAGTTTAACTGTATGTACCT
AAAGTCTATTCACGATAAGTGTGTGCACTCTTTTTTCTTTAACCTATAAC
TTTTGAAGGAATTCGTCAATTTTTATAAATTTGGTGTCATTTGAAAGATA
TTAGTGAGTGGAACAATTTGAAATAAAAAAATCTTCTAAAAAATCCTGAA
AATGAAGATGAAAATATTGACTATATTGATGCTCCTGTCAAGTTTTCTAC
TTCCTATTTTTTACTGAGTTAAGGTCTAGCATGCTAGACTATAGGTAAAA
GAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAAAATAAAACGTTAA
TTTTGGCAGTTTTTCTCATTCTCTTTTTTCAGTTTTTTATCACATGATTA
TCATGAACAAATTCTAAAACTAATCTGCATTGAAATCCACATTTAAAAAA
ATATGATACTATGGTTTAAAGGTACCAAGGTTACATTAGTTTCATATCAG
ACACATGTTTCATACCAGGACAGTGTCTGCCTATTGTTATATTATACTAA
TATAAATATAAGCAAAATATGTTTTTCTTTTCCTCTTTCTAACTACTCTT
GCTCCACATCTGTATCAATTCAATGTTGAAAAGCTTATAAATCTTTATAA
AATTGATGAGTAAGCAAACAAGAAGCCGTAGCGGCGTGAAGGCCCAGCTG
ACGTGGCAATAACCAAATGTCGTTTGTATTGGGTACCTTAAGAGAACCAA
TGTTTGCGGAATCGTATTTTTGCAATTTTAGGGTTTGAAAGAAAACATTG
TGTATTAGAATCCTAATGCACATTTTCGGCTGAGATTGAAATACGGAATA
TTCAAAAAGTTAAAAAAGTTCGAAAATTGGCTTAATGAAAAAAAGAGAAA
AGAAACCAGCTGAGCTGGAAGGTCAGCAATGATAAATGATACGCAATATA
TGTATATAATAGATTTACTTTATGTTTTTGTTACTAGTTTGAAAGAAAAA
ATCGGTTTAAATAAATTCACAAACTTCAAATGTCAAATGTTGACCGTCAA
AGTTCAGAAGTATCGATTTAACGCGTATCATCATGAAAAACATTCCAAAC
TTATTCAAATTTACACATGAGCTGCGTTTTAGTATTCTTTAATGTGGGGG
GCGTACGGTTTTTCGGAATTGCGGAAATCGACCCTTTTTTCTTCGGAATT
TCGGAATTCAGGCAAAATTCCTTCGGTATATCGGAATTCTGAAATCGTTT
CGGTATCAGAAATCCATGAATTTCTGCTTCGAAATTTCGGTATTATAAAG
TTTTTATCCCCTTTTTTCGGAATTCATACATGAAAAATCAAAATTTATGA
AAAATTAATCAAAACGAGGAAAAATACCCAAAAAATCGGTATCGGAAATG
CAAGTATTTTTTTACGGAATTTCGGAAATTTTGGCAAAATTATTCGGTAT
TTCGGAAATCACAAACCCCGTACGCCCCCCCTTTAATGAGTTACGACATA
AGTTTACTTGGGAAAATTCTCTGTCAGGTTTGAAAAATCCAGTCATCGAC
CGTTTAGAGCGATAAATCCAAAATTAACCATTTTCACGGGTAGCATCATT
AGTAGGGGGAATTTTGTTCGATTTTTTGGAATCGCTTGACTGTTTTGTTA
GAAGCACTTGTTATACATTTTTGGAAAGCTAAGGGGTAGGGGAATCGAAA
TTACTATGTTTCCAATTTTTTTTCGGACACTTTGGTGTGATTTTCGGACA
AATATGACGGTCTCAGGCAAAAATCATAGGGTTAAAAATTAATGAAAATT
TTAGCTCGAGAAAACGGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAA
AAATTAAGATTAGAGATATATACGACAGGTCTCCGTTTTCTCGAGCTAAA
ATTTTCATTAATTTTTAACCCTATGATTTTTGCCTGAGACCGTCATATTT
GTCCGAAAATCACACCAAAGTGTCCGAAAAAAAATTGGAAACATAGTAAT
CTCGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATAACAAGTGCTTTT
AACAAAACAGTCGAGCGATTTTACAAAATTCCCTCTACTACATGAAAAAT
ATTCCAAACTTATTCAAATTTACACATGAGCTGTATTTTAGTATCCTTTA
ATGAGTTACAACATAAGTTTACTTGGGAAAATTCTCTGTCAGGTTCGACA
AATCCAACCACCGACTGTTTTTAGTTTAGAAAGATAAATCCAAAATTGAC
CATTTTCACGGGTAGCATCATGAAAAACATACCAAACTTATTCAAATTTA
CACATGAGCTGCATTTTAGTATCTTTAATGAGTTACAGCATAAGTTTACT
TGAAAAAATTCTCTGTCAGGTTTGAAAAATCCAGCCACCGACCGTTTAGA
GCGATAAATCCAAAATTAACCATTTTCACGGGTAGCATCATGAAAAATAT
TCCAAACTTATTCAAATTTACACATGAGCTGTATTTTAGTATCCTTTAAT
GAGTTACAACATAAGTTTACTTGGGAAAATTCTCTGTCAGGTTCGACAAA
TCCAACCACCGACTGTTTTTAGTTTAGAAAGATAAATCCAAAATTGACCA
TTTTCACGGGTAGCATCATGAAAAACATACCAAACTTATTCAAATTTACA
CATGAGCTGCATTTTAGTATCTTTAATGAGTTACAACATAAGTTTACTTG
GGAAAATTCTCTGTCAGGTTTGAAAAATCCAGCCACCGACCGTTTAGAGC
GATAAATCCAAAATTAACCATTTTCACGGGTAGCATCATGAAAAATATTC
CAAACTTATTCAAATTTACACATGAGCTGTATTTTAGTATCCTTTAATGA
GTTACAACATAAGTTTACTTGGGAAAATTCTCTGTCAGGTTCGACAAATC
CAACCACCGACTGTTTTTAGTTTAGAAAGATAAATCCAAAATTGACCATT
TTCACGGGTAGCATCATGAAAAATATTCCAAACTTATTCAAATTTACACA
TGAGCTGCATTTTAGTATCCTTTAATGAGTTACAACATAAGTTTACTTGG
GAAAATTCTCTGTCAGGTGTCAAGCCACCGATCGTTTAATGCGACAGATC
CAGAAATTACCATTTTATTTAATATACGTGTAGAATCATGAAAAAAGTCC
CAATCTTCTTCAAATTTACACATGAGCTGCATTTCAGTCTCCATTAACAT
GATTCCATAATCAACTTATTTGAAATAATTATGTGTCGAGTTTGACAAAT
CAAGCCACCAATCGCCAAACGAGACAGATCCAGAAATAACCATTTTCACG
CGTAGCATCATGGAAAAAATTCCAATCTTGTTCCAATTTACACATGGGCT
CCATTTTAGTGTCCATTACCAAATTCCAGAATCAGTTTACTTGAAATAAT
TATGTGTCGAGTTTGAAAATCATACCACGTCCCACCACTGACCACCGTGG
TTTTGTTAACACTAACAGCCTGAACAGCGACAGATCCAGAAGTGACTGTT
TTCTTATGTAGCATCAAGAAAAAAGTTCCAATCTTATTCAATTTTACACA
TCAGCTGCATTTCAGTTTATTTATTTCTATATCAGAAAAGCCATTATTTC
CTAAAAATTTATAAAGTCTTTTTGAAAACAAGAAAAAATTAAAAATGAAA
GTGATTTAAGGTAGAATTTTTACTCATAAAACTTGAGCAAAGACTATAAG
ATATGGCAGAGTGTTGAAAAAGGTTTATAAAGAAAAACAATTACAAAATT
TCTTTGGTTTGAAAGTCTCTTGACCACTAAAGCAAAGAAAATGTTCAAGA
AAGTATGAATTAACCTCCTCGCTTCGACCGCCATCTTGTTTTGTTTTGCA
AATTGTTTTGAAGGAGCGCGGAATCAGAAAATATATCTTTTATAGCCAGT
ATCCGACTTTAGCAAGCTTTTCCATCTCCAGACGGCAAAATTAAAATGTG
TGGTACTGGTTTTAAGCGCCGTTTCTGCCTAAAGTGACACACGGACGGAC
AGACAGAAAATTGCAAATGAAAGGCCCACTCGCTTAGCGCTGGGCCAATG
ATATCACTCTTATTTAAAAACAAAACCTTCAAATCTATTTTCAAATTTCA
GCTCAATTTGGATCAACAACGGTTCTTTTCTTGTACGTCTTGATAAAAGC
GACAACAATACACAAAGCGGCTGAAAAATGTGACCAAAGCCGATGGGTTG
AGTTAAATCCAAGAGCCTTTGCTGTGGAAACCATACAAGAGGCTTTTATT
AACCTGCTCAGCAAGTAAGAGTACTTGATGTAAAACGACCGTATACTCGA
CCCAAGAGTCAATCCTTAGCGGACAATTTTCATTTTTAGCGAAATTCAAT
AGAGAGTGCACGGTGTAAAAATGTATTACTAATTTTCTGGCTACTACTAT
ATTTCAGGTTCAAAATATTCGATATTTGTTCTTTTCCTTTAAGGCCGGTC
TCCACTTTCACGCGAAATGGTCGACAGTTTTTTTCTGAATCTTTTTTACC
TGAAGAAAAAATTACATCATAAAAAAGTTTTGTGCCGCGAACAAAAAAAA
AGTTGAAGGAAGTTCTATTTTTTCATCCGTTACGTCATTTTTGACCAATG
GAATTGCTTCATTTTTCAACCGACCAATAACCTTACAAAAACGTCAAAGT
TTTCGCTCATGTCGCGCGAAACTGGAGACCGGCCTTTACTTGTTTAACTT
GGCATCTGTTCTACATAAACTCACTTACTTTCCTTTTTAAGAAATGGTTT
GCGTGAGGCCGTTGAATTCAGTGCCAATAAAATTTGCTACGTCAAGAAAA
TTGATCAGGATGGGCATACAATCGTTGATTGCTCCAAGGAAGCTCCGAGA
TACTATTTATGCCGATATGAGCGTGTAGACGAATTCTGGCCATCCATCAT
TGGCGTACCACTAGATCAAAATGGAGATTATGAACTTCTCGTCGAAGAAG
GTATTTCTGGATATGGTTCCGTAGCAGATGATTTCTTAGGTGCTAAAAAA
AGGTGTGAAGCACGTGGCAAGGAACTTTTGACAATCGAAAGCGCAGCGAA
AATGGAAACTCTTATCGATTTGATCAACAACTTT Coding sequence (CDS) from alignment at sc0000135_pilon:767195..772578- >XLOC_026410 ID=XLOC_026410|Name=XLOC_026410|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1188bp|location=Sequence derived from alignment at sc0000135_pilon:767195..772578- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATAAGCATATGTGATGCACTATTCAATGGTTTTGTCAGCCAACAAGG
AATTGGAGCTGATCAACATTTCTGTGCAGAAACAATTAATGATAAGCATA
TGTGATGCACTATTCAATGGTTTTGTCAGCCAACAAGGAATTGGAGCTGA
TCAACATTTCTGTGCAGAAACAATTACTCAATTTGGATCAACAACGGTTC
TTTTCTTGTACGTCTTGATAAAAGCGACAACAATACACAAAGCGGCTGAA
AAATGTGACCAAAGCCGATGGGTTGAGTTAAATCCAAGAGCCTTTGCTGT
GGAAACCATACAAGAGGCTTTTATTAACCTGCTCAGCAACTCAATTTGGA
TCAACAACGGTTCTTTTCTTGTACGTCTTGATAAAAGCGACAACAATACA
CAAAGCGGCTGAAAAATGTGACCAAAGCCGATGGGTTGAGTTAAATCCAA
GAGCCTTTGCTGTGGAAACCATACAAGAGGCTTTTATTAACCTGCTCAGC
AAAAATGGTTTGCGTGAGGCCGTTGAATTCAGTGCCAATAAAATTTGCTA
CGTCAAGAAAATTGATCAGGATGGGCATACAATCGTTGATTGCTCCAAGG
AAGCTCCGAGATACTATTTATGCCGATATGAGCGTGTAGACGAATTCTGG
CCATCCATCATTGGCGTACCACTAGATCAAAATGGAGATTATGAACTTCT
CGTCGAAGAAGGTATTTCTGGATATGGTTCCGTAGCAGATGATTTCTTAG
GTGCTAAAAAAAGGTGTGAAGCACGTGGCAAGGAACTTTTGACAATCGAA
AGCGCAGCGAAAATGGAAACTCTTATCGATTTGATCAACAACTTTAAATG
GTTTGCGTGAGGCCGTTGAATTCAGTGCCAATAAAATTTGCTACGTCAAG
AAAATTGATCAGGATGGGCATACAATCGTTGATTGCTCCAAGGAAGCTCC
GAGATACTATTTATGCCGATATGAGCGTGTAGACGAATTCTGGCCATCCA
TCATTGGCGTACCACTAGATCAAAATGGAGATTATGAACTTCTCGTCGAA
GAAGGTATTTCTGGATATGGTTCCGTAGCAGATGATTTCTTAGGTGCTAA
AAAAAGGTGTGAAGCACGTGGCAAGGAACTTTTGACAATCGAAAGCGCAG
CGAAAATGGAAACTCTTATCGATTTGATCAACAACTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:767195..772578 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 253-594:343 |
| Aaloc | 91-249:982 |
| Aaloc | 1-87:5385 |
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