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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000254_pilon:34887..39223+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_026285 ID=XLOC_026285|Name=XLOC_026285|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4337bp|location=Sequence derived from alignment at sc0000254_pilon:34887..39223+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAAAGGAAACCCTCAGCTAAACTTGCTGACAATATCGGTAAGATGAT
TGTAATTTTCAATCGCTCATATCTACTGAAGAGCCTATCAAATGTGGTCT
TCGTGAAAATTTATTCTGATTCAGGTTAGGCACAGATTCTTCCTTTAACA
TGGTCCGGACTAAATAATTGATTAATTCCTTTAGGAGAGGACACTGGGCC
ATTGCTCAGAATTCTTTACACCGTGGAGGAGAGTAATGGTAAAAGGATGC
AGCAGACACTACCCTATTCCAGGCTGAAACCCAAATGTTTGACTACCGGC
GAGGAAGTACATGTAAAAGATTTGGCTGAACTGCGCCATTATAACTTTTT
ATACCCCCATTCTGACGTGTACTACGAAGCCATACTTAtggaaataaaga
agaaaaagaggaCGATGACAGGTTTGGTTAAACATtacatttatttcatt
tattcattttgaGGCAATTTGTTTGGATGAGTTTATGTCCATACTTTTGA
GACCAACTTTAGGTCTTTCCATAGAAATACACGAATATGGTGAAGCCATT
TATCTGGTTCGGACAATTGGATCctgaaaataaagataaagtAACTAACT
ATCATAAGAGCTTGAAATTCTCAGAAAGGTGAAATCGGataaaaatgtca
acaaaaaCCCTGACAATGTGTAAAataaaacagatcaaattttccaggaa
ggctatgcctgggaaacagatgtttaaaaaaggacctcgctggatgcttt
cgATGCTTCTAAGTgcgatgcttataaaaaaacatgtatttcacAATCag
taaatgaaataaaatttcaaataccTCTTTCAATTTCAGAAGATGTTCCA
ATTTCAGAAGATAGTCTTGAGATGCTCAACGATTCCAATGCTGCCACAAC
TCATCCAAGTCAAGGAGGTATGctataagaaatttaaagaTAGGtATAAG
AACAGCACCAGTTTCCAGAAAGAGGCTTCTTCTATAGTGATAGAGGAATT
TTAGACAAATACTAATTCcaatcaaagtttttcaaagatgTGATACTTTA
GAGATTAAATTGATTTAATAACTTATCATGATAGTTTCATCTTGCTTGTC
ACATCAGCTAAATACTTAAGGCTTTTAACAGCTACAGATAATTGTAGCTA
TTTTTCTGGTACTCATTTTCAGGAAAGACAAccaaacagaagaaaaagaa
gcaaaagtGCAATAATGGTATATTATTTATAAGTCACATTCCACAAAGTT
TTGCTTTAAATGACGACCAACCATATTGatcttgtttttaaataataaag
agggaaaaatgaaaagtaatatAAATTCAATAAGGCTTGCCATTTTCTTG
TGGatgtcgttaggaaaattcatagCTTTGGAAGACAAGGAAGCCCTaat
attttgtcttatttttgacaaatttacaTGGATTTGAATCATTTagataa
aaatttacaaatgaaAACTACATTGACAACCTATgtctaatttttcattt
ttgatgtaaaaaattaaaacaatttttgatctctttgcaatttttcacaa
atttttctgcataaagcataaaaaatcaatcaaagctgAAGGAAGGAACC
TTTAATAAACACAACACTACCATGCAAACTCCCTTGTTAATTGACCTTGG
AAAAATTTCCCAGAATAGCCCTCATCAATCAGTCAGTATTAGGTAACAAC
GCTAATCTtcactcttcccctgaccacttttGCTTTCGTAAGTAAGTGAA
CTATTACCTCTATCTCCAGATGAATTCAAACAACAAGTTGATGGACGCAA
AAAGCCAGCTGGCATCGAAGTGGAGAATCTCACCAACAATGGACAAGGTT
CCACCAACTAGTTtcctttaaataaaaatgaagttaATTCTGTTAAGCCT
ACAATAAATTTCATTATACTGGCTGTAATTTTTGTGATCAAAACTCATCT
GCAAAGTTAAAAGATTTGACAGGGACTTAATTTCACAGATGGCAATATTA
GAGGACAACTCTTTCATGGTTTTGTGCCTGTGCATTTTACTACCAAGTAA
TCCATGTTTGTTGTTGAATTATACATTATTAGCACTTGtctgatgccagt
aaacatttaaGATAAGTTGCTCGACATTTTTAGAGACTTGTTTGAAAATG
TCTTACAGATAACACCTGCAGAATTTAAAAGTAGAAGGATTGACAAgaac
ttttatcaatttttttaacagGTGACGTTGAAGCCATAACAGCTCAGAAA
CAAAAAGGTACATGAAGAATTCCTACGTTATGGCCATTATAAACTCTGTA
CTTGCACATTAagtatttgtgcaaaaaaaattaatggtaaATTCTATCCA
CAtcccattcattactttttttaaatcttagcCAAAGACAACCAAACTAA
GCAGGCAAAGGCAAAAGCCACAAAGATGCTCACACAGGAAATTCTGGaaa
aaaaaGGTATAATAACTTTTATTGTCCACCTCTAAGCAAAACGCACTTTG
GACCCTCAGCTTTGCTTTGTTGAATATCATCAAGCTtgactgaataattt
tcgacatctgatttttcttgtcgaatatctgcttaatattaACTTATCGA
AGGTTAGAAAGTAAATCTGTGCTATGACTCTAATTGATTCAAAAATAATT
AGTACAAAGAAAACATCATCAGCCATTCATTTTATACGACTAATTTGGAA
CTTCACGTTTTTGAAACAGTTTTCTTTTTCTACAGAAGCatcaatcaaaa
taaatatGAGTGGAGATTTACTAGATAAATTTGTTGATATGGATGAAATT
AACTATCAAGCCAATGACATGAATGATTCTGAAGGTAACTTTAGTAGGAA
CTTGTGatatttgaataaaataagAATGCACACACCCCTCTGATTTGTTT
TGGTGTAATTTGGATTTTTAATAAACCTTTTACATTGTGTAGCTTGCCAG
TACAATAAATTTGTTCAATAAATGAGAATTTGTAATTTCAAGAACGAAAA
CAACTTAATGATGTAATGATTTTAATGTAAAATTGAAGGTTGACTTGAAT
TAAATAAATAatttcTCAGACTTTGAAATCATCCAAACCAATGTGGACCA
ACAGCAAAATACAGAATTCAAACCACCCAAACAGTACCAGCCATCATATC
AACACAATTCTTCCCAATTCAAATTTCCACCAAGCCAAGAATCAACACAA
ATtaaaccaccaccaccaccaccaccacaacAATTCCAACAGCCACAAGT
AGCTAAACGAAAAACTGTCCTGGACCAAGCAACTCCACCTTTCCGAAATC
ACCAAGAATACACCGAAGCCCAGAGTAAGACGTTATTATAATTTATTCAT
TTACATATTGCTTCTTTCAAAATTACTAACCAATtcttgaattaaaaaga
aaattttgaagattaaaaatttattagcgtttattattttattagcatac
cgtaaatcaccgattaagcgcccgggcgcttatttaatttttcaggctct
gagaggggcgcttattcaagcggggcgcttatttttttatttcagaaatt
cgtatatcaacaaattcggaatctgcttaaacttaacttcaaaaaaggat
aaataaaagaaaaatccaataagaaacagtaaaaaagctaaaagaccttg
atttttatttttgttccaatttttttcgactgTTAATCATCTGAAGAGAA
ATTCTTATCCTGGAAATTAGCCtattattcgagcggggcgcttaatcggt
gatttacggtacATGGTCTGTTATTCGTTCCTTGAATTTTTCAACATGAC
CTGACATCAcatcaatattttaattttaggGAACATGGATCTTGCTCCAG
CTCCTCTCAAACTACCTAATTCTGATTTTGTTCAAGGTATGGAAAAAGTA
ATCTAGATTTCGTTTTTAAGtagttttctaaaaaagaggCTTGAGGTAAA
TAATTATTAAACTTAAGCTTTTCACCAGGGGAGTGTTTATTGAGACCTTT
AACTCTTGATCATTTTAAATGTTGTCAAAACAGTTATATTGATATaagtt
gtttcaattttcagaaagatCACCTGTTTATCACCATTTGGAAACaaaaa
aaGGTATGTACCATCAAAAACCCTTACCTTATTCAATAAAATTTGCCTTA
ACTAAATCAGTCACCATTAAATTTCCTTTGCAATTCATtcatttacaaaa
acaaaattaactCTTGTTTTGTTTCCTTAACAGTGTCTTGTAGCAGATGT
CTCGCAACAAACAAGGAGTTAAGAGAGTTGAAAGAGAAACTTAAACAGAA
AGGTAACTTTGATTTTAATAGACGGTACTCAAAACAG Coding sequence (CDS) from alignment at sc0000254_pilon:34887..39223+ >XLOC_026285 ID=XLOC_026285|Name=XLOC_026285|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2286bp|location=Sequence derived from alignment at sc0000254_pilon:34887..39223+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAAAGGAAACCCTCAGCTAAACTTGCTGACAATATCGAGAGAAAGGA
AACCCTCAGCTAAACTTGCTGACAATATCGGAGAGGACACTGGGCCATTG
CTCAGAATTCTTTACACCGTGGAGGAGAGTAATGGTAAAAGGATGCAGCA
GACACTACCCTATTCCAGGCTGAAACCCAAATGTTTGACTACCGGCGAGG
AAGTACATGTAAAAGATTTGGCTGAACTGCGCCATTATAACTTTTTATAC
CCCCATTCTGACGTGTACTACGAAGCCATACTTAtggaaataaagaagaa
aaagaggaCGATGACAGGAGAGGACACTGGGCCATTGCTCAGAATTCTTT
ACACCGTGGAGGAGAGTAATGGTAAAAGGATGCAGCAGACACTACCCTAT
TCCAGGCTGAAACCCAAATGTTTGACTACCGGCGAGGAAGTACATGTAAA
AGATTTGGCTGAACTGCGCCATTATAACTTTTTATACCCCCATTCTGACG
TGTACTACGAAGCCATACTTAtggaaataaagaagaaaaagaggaCGATG
ACAGAAGATGTTCCAATTTCAGAAGATAGTCTTGAGATGCTCAACGATTC
CAATGCTGCCACAACTCATCCAAGTCAAGGAGAAGATGTTCCAATTTCAG
AAGATAGTCTTGAGATGCTCAACGATTCCAATGCTGCCACAACTCATCCA
AGTCAAGGAGGAAAGACAAccaaacagaagaaaaagaagcaaaagtGCAA
TAATGGAAAGACAAccaaacagaagaaaaagaagcaaaagtGCAATAATG
ATGAATTCAAACAACAAGTTGATGGACGCAAAAAGCCAGCTGGCATCGAA
GTGGAGAATCTCACCAACAATGGACAAGATGAATTCAAACAACAAGTTGA
TGGACGCAAAAAGCCAGCTGGCATCGAAGTGGAGAATCTCACCAACAATG
GACAAGGTGACGTTGAAGCCATAACAGCTCAGAAACAAAAAGGTGACGTT
GAAGCCATAACAGCTCAGAAACAAAAAGcCAAAGACAACCAAACTAAGCA
GGCAAAGGCAAAAGCCACAAAGATGCTCACACAGGAAATTCTGGaaaaaa
aaGcCAAAGACAACCAAACTAAGCAGGCAAAGGCAAAAGCCACAAAGATG
CTCACACAGGAAATTCTGGaaaaaaaaGAAGCatcaatcaaaataaatat
GAGTGGAGATTTACTAGATAAATTTGTTGATATGGATGAAATTAACTATC
AAGCCAATGACATGAATGATTCTGAAGAAGCatcaatcaaaataaatatG
AGTGGAGATTTACTAGATAAATTTGTTGATATGGATGAAATTAACTATCA
AGCCAATGACATGAATGATTCTGAAGACTTTGAAATCATCCAAACCAATG
TGGACCAACAGCAAAATACAGAATTCAAACCACCCAAACAGTACCAGCCA
TCATATCAACACAATTCTTCCCAATTCAAATTTCCACCAAGCCAAGAATC
AACACAAATtaaaccaccaccaccaccaccaccacaacAATTCCAACAGC
CACAAGTAGCTAAACGAAAAACTGTCCTGGACCAAGCAACTCCACCTTTC
CGAAATCACCAAGAATACACCGAAGCCCAGAACTTTGAAATCATCCAAAC
CAATGTGGACCAACAGCAAAATACAGAATTCAAACCACCCAAACAGTACC
AGCCATCATATCAACACAATTCTTCCCAATTCAAATTTCCACCAAGCCAA
GAATCAACACAAATtaaaccaccaccaccaccaccaccacaacAATTCCA
ACAGCCACAAGTAGCTAAACGAAAAACTGTCCTGGACCAAGCAACTCCAC
CTTTCCGAAATCACCAAGAATACACCGAAGCCCAGAgGAACATGGATCTT
GCTCCAGCTCCTCTCAAACTACCTAATTCTGATTTTGTTCAAGgGAACAT
GGATCTTGCTCCAGCTCCTCTCAAACTACCTAATTCTGATTTTGTTCAAG
aaagatCACCTGTTTATCACCATTTGGAAACaaaaaaaGaaagatCACCT
GTTTATCACCATTTGGAAACaaaaaaaGTGTCTTGTAGCAGATGTCTCGC
AACAAACAAGGAGTTAAGAGAGTTGAAAGAGAAACTTAAACAGAAAGGTA
ACTTTGATTTTAATAGACGGTACTCAAAACAGTGTCTTGTAGCAGATGTC
TCGCAACAAACAAGGAGTTAAGAGAGTTGAAAGAGAAACTTAAACAGAAA
GGTAACTTTGATTTTAATAGACGGTACTCAAAACAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000254_pilon | genome | sc0000254_pilon:34887..39223 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1192-1293:4236 |
| Aaloc | 1153-1188:4067 |
| Aaloc | 1096-1149:3832 |
| Aaloc | 841-1092:3072 |
| Aaloc | 742-837:2738 |
| Aaloc | 667-738:2384 |
| Aaloc | 631-663:2224 |
| Aaloc | 553-627:1772 |
| Aaloc | 508-549:1175 |
| Aaloc | 430-504:842 |
| Aaloc | 193-426:187 |
| Aaloc | 151-189:1 |
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