|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:347604..349995- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025758 ID=XLOC_025758|Name=XLOC_025758|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2392bp|location=Sequence derived from alignment at sc0000339_pilon:347604..349995- (Clytia hemisphaerica_ch_hm2_pilon)
AGTGATTGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGTTTTT
GTATTATCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCAATCA
ATCGGCATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAATACAG
GTGACTTGTTTTTTTTTCACAAAACTTTCGCGAGCAGAAACTTTCAATTT
AATTCTTTATAAAAAAACCATTAAATTTTTATGGCTGGGGCTTTGGCACT
AATTATTTGGTAATTGTTTGAATACGAGGCAAGTGATGTTCGTGACGTAA
TTTATGAAAAGGTCTATCAGGCCTATGAATAATTTGAAGGTTGAGCCCAA
TGCGTTGCGCACGTTCGATAATTTTTAGATTATAGCCAAAATGAACTTCT
TATTCTAGTACCATGGTGTTTTATGATTTTTTCATATATTTCAGAATAAA
TGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTACCCTCACTT
CGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGTATGGAAAAA
ATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACATGTCAAGAA
GTCAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTGGGTTGGCAG
TGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTGATGGAGGTT
AGTTTTATCCCTACTCTACATACAGTATATAGCCCCCAAAAATAGGTGGC
ATCCAATACTGTATGTAGGTTCTGATTCAAATAAGAAGTCTGACCTGGTA
GTCGAAATGAGATTATTTTGAAACCTACATTTTTTTGACCAAGGAATACT
GTGATTATTGAACTAGGAAAGAGAATTTTTGACGAAGGGAATTTATTTAT
AAACATAATCTTTCAAATTATAATTCCAGACTATAGTCAAAATTTTAAAT
CGAACATGATTAAATTTTTTTTATATGGATAGATAGTCGCACTTGATTCT
TCAATGACACGACGAAATTTGTCTTCCAGTTCTGCCTGTCTGCCTGACTG
TTTTCATTTCGTTTAGTCCAATGTCAGCATGAAAAATATTGTTGAAGTGA
AAACTTTTGAAAAATAACTCAGTTTTGCTGAAGTTTGAAAGCAGAAAAAA
ACTTCAAAACTAACCGGCATATTGGAGGTCATACCTTAGGCGTACAAACT
TTCGCGAGCAGAAACTTTCGCGAGGACGAAAAATCGGGAAATACACGACA
TATACTTTCGCAAATTTAACGGAAAAACGCTTTTCGCGAGCATAAATTTT
CGCGAATCAAGACGGAATTTTCACATGAAAAAATGGCTTAGAGGGACAAA
TACTTCTTGGATTGGCTTGAAATATTTGTTCTTTGACTTATTAGTCTTTT
AGCAGGCTAAAAAGTGCCATAAAAGTTACATTTTATTCAAAGTTTGAAGT
TTTACAGATTTTCCATTTCGTCAAGAATCTTTCGCGAGGTTAAACTTTCG
CGAATGGCCCTTCCTAGAATTTTTAAAGACATTTACTTTCGCGAAAAGGG
CCAAAATTCGCGAAAATCGCAAAAGTTTCTGCTCCTGAAAGTTTCTGCTC
CTGAAAGTTTTTACGCTTAAAGTATACTGTTTGCACTACATTGTTTTTTC
TAAAATTTAAAATGGAGCCGAAAATCCCTTTTCAGCAAAGTCAACCCAAG
ATCATGGGGATTTATTCACACAATTAATACGGAAATAACACCCTACGTTG
CAGAAAGAGCCCTCGCGCACTTTTGTCAATTATTTCCCGCGTCGGTCTTA
TAAAGACACTGTTAATTAAATATTGCTTTTTTCATGTTATATTTTAGGAG
GTTGGTTAAGAGTGGGACAAATCAATATTCGAAATAGCGAAGAGGCTAAT
GCTTACAATTTCAATGCTATCGTCAAACCTTTTACCAGCTCAATTCACAA
CCTGTCAACGTCCAATTATCTCTTAAGCGGACGTCGATTTGAAGTTCTAA
ATCAAATGGCAAGAATCACACAATTTCGCGTTTATTGTCGCAAGGTGACA
CGTGGACGCACAAACCATTACACTTTCGATGTCTCAACATCCAGTGGTTC
AAATAACAAAATGTTTGACCATGTCTTAAAGAATGATGAACCGCCACCAC
TCAACTTATGTGGAAAAATCAAATTTCTGCCAGATGATGATTCGAAGATT
CAAACTTTTGACTGCGCTGATTTAGTACCAATAATTGATTATGATGATAA
CAAAATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGCTTCCGCTTCCA
CTGGAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTGATGAAAATGAC
AGTAATGATAAAATTGGACAATGGATGTTCTTTATTCGATAA Coding sequence (CDS) from alignment at sc0000339_pilon:347604..349995- >XLOC_025758 ID=XLOC_025758|Name=XLOC_025758|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000339_pilon:347604..349995- (Clytia hemisphaerica_ch_hm2_pilon)
AGTGATTGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGTTTTT
GTATTATCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCAATCA
ATCGGCATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAATACAG
AGTGATTGTGGAACTTCATGTAAAGCAAAAGAAGAATGCGTTTCGTTTTT
GTATTATCGAGTCCAACCACCAACCTGTACATTGCTCGATAGTCCAATCA
ATCGGCATAGCGTCAGAAGGAATATGAGTGTTGATTACTACGAAATACAG
AATAAATGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTACCC
TCACTTCGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGTATG
GAAAAAATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACATGT
CAAGAAGTCAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTGGGT
TGGCAGTGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTGATG
GAGAATAAATGCAGTGAAAATACTACAATTTGTAACTTTGGGACTTGTTA
CCCTCACTTCGGAAATGATTCTTATACATGTTATTGCAAAGGAAAATCGT
ATGGAAAAAATTGTGAAAGGACTAACTCTGCGGAAAACCCACATGTCACA
TGTCAAGAAGTCAAACAATTAATGCCTGAAGCACCAAGTGGAATGTATTG
GGTTGGCAGTGTTGGTGCAAAAAACCTATTATTTTGTGATATGATAACTG
ATGGAGGAGGTTGGTTAAGAGTGGGACAAATCAATATTCGAAATAGCGAA
GAGGCTAATGCTTACAATTTCAATGCTATCGTCAAACCTTTTACCAGCTC
AATTCACAACCTGTCAACGTCCAATTATCTCTTAAGCGGACGTCGATTTG
AAGTTCTAAATCAAATGGCAAGAATCACACAATTTCGCGTTTATTGTCGC
AAGGTGACACGTGGACGCACAAACCATTACACTTTCGATGTCTCAACATC
CAGTGGTTCAAATAACAAAATGTTTGACCATGTCTTAAAGAATGATGAAC
CGCCACCACTCAACTTATGTGGAAAAATCAAATTTCTGCCAGATGATGAT
TCGAAGATTCAAACTTTTGACTGCGCTGATTTAGTACCAATAATTGATTA
TGATGATAACAAAATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGCTT
CCGCTTCCACTGGAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTGAT
GAAAATGACAGTAATGATAAAATTGGACAATGGATGTTCTTTATTCGATA
AGAGGTTGGTTAAGAGTGGGACAAATCAATATTCGAAATAGCGAAGAGGC
TAATGCTTACAATTTCAATGCTATCGTCAAACCTTTTACCAGCTCAATTC
ACAACCTGTCAACGTCCAATTATCTCTTAAGCGGACGTCGATTTGAAGTT
CTAAATCAAATGGCAAGAATCACACAATTTCGCGTTTATTGTCGCAAGGT
GACACGTGGACGCACAAACCATTACACTTTCGATGTCTCAACATCCAGTG
GTTCAAATAACAAAATGTTTGACCATGTCTTAAAGAATGATGAACCGCCA
CCACTCAACTTATGTGGAAAAATCAAATTTCTGCCAGATGATGATTCGAA
GATTCAAACTTTTGACTGCGCTGATTTAGTACCAATAATTGATTATGATG
ATAACAAAATTCGTTACCGCTTGTATGCCGGCCTAAAAAAGGCTTCCGCT
TCCACTGGAAGAAAAACGGCCGGTACAACCGTTCTTAAATGTGATGAAAA
TGACAGTAATGATAAAATTGGACAATGGATGTTCTTTATTCGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:347604..349995 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 616-1158:544 |
| Aaloc | 361-612:1949 |
| Aaloc | 211-360:2393 |
|
