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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000312_pilon:141211..144262+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025748 ID=XLOC_025748|Name=XLOC_025748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3052bp|location=Sequence derived from alignment at sc0000312_pilon:141211..144262+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTGCTGATGACGAACCAGCAACTTCAACTCCAGCTAAAAAGGCACCAGA
ACCTGGTAAGGTACCTTTTGTATCGAAATTCTATTAACTTTCAATCACTC
ATTTATCATTTTTGGTAGTTGATTAGGTCTGAAACGCAATTGTATCGATT
TGAATAGCCATCTACGAGGGATATGGTCAAAGGCCGCCGATAGGTCTACG
AACATTAGAAAGATTGGTTGCATTTTGCGATGAGATATTTGTTGTATCCT
TTTGATGGTGTATATTCCATCGGTAGTTCCACGGTTTTTACGGAATCCAT
TTTGATGATCAGACAACTGGGATTCATACCAATTTCGAAGTCTGCTAAGG
ATAATGTTTATGGTAAGTTTACACACGGTAGAGCCAATACTGATACCTCT
GTATTTCGTGGGGTCACTTTTAGATCCCTTCCCTTTCCATAATGTTTTCA
AACGGGAATTTCCCCAGGATAGAGGGAGGTCAAGGTTTTCCCAAAGATTG
GTCATTATACGATGGACTACTTGGATCATTATCGGATGactgttcaattt
tttcaaaagttcagGCTCAATGTCATTACTTGCCTTATTTGCTTTGAGCT
CTTTCAGGTGTTTCTGAATTTCTTCTGCAGAGGGAGGGGTGTCGATGATT
GGGGTATTGTCTGAGAGTGCACAGAGTTCTTCTACAAAGTCTGGGAGGTT
TTCCTCGGTCAATTCATCAGGTGTTCGTGTTTTAGATGGATCATCCggat
tgaaatgttttttaaaatgatCCAAAATTTTATCGGGTGGACACGCGCTA
TTGATTGGTTTGAGAGTTGTTTGCTGATTTTTGGCTCGCGCAAACAGTTT
CTCTATTTCACGATTGATCGCTAAGACATTTATCTTTTCAGCTTCTTGTT
TAAAATgctcatttttcaaatatttgacacGTGATCTGATCTTTTTGCGA
ATGGAAGCCAGACTTTTATGATCGCTGTTATTTGACATTAATTCGTCTTT
CGTTTGAAATAATTGTTTAAGTTTTTCATCATTATGCCAGGGTTGAGTTT
GTCTGACACGATTCTTTTTCGGTAATGTAGTGTCTGCGCTACTTTTGATT
ACGGTAACAAGTTTTTCTGTAAGTTCAGTATTGGTCGATTCATCCAAATT
GTAATTTGAAAAGTTCTCGGTTACAGTATTAAGAAAGTTAGATTCTGCTA
CATCGTCAATAGCTGAGAAGTCTATTCTCTGTTTGATAACTGTCTTTTTT
CTACCAATAAAGCGTGCGATTTTTGTGACTGGAGTATTGAGACTTGCTAT
AACGAGCCTGTGATCTGTGTCAAAATCATAAGAATTGTAAACACGACAGT
TTGTTGTGAACTTTCTAATCCAACAACATGATAGAACGAAATCATATACC
TTTTCTGTTTTACCATCGGGAGAGTGCCATGTAATTCTCCTACATAACTT
ATGGTTGAACCAGGTATTCAATACAGACATTTTTTGAGTGCTTACAAGAT
CATGAAATCTACTCCCATTATCATTTACAACAAGACTTTCGATTATTTTC
CCTTCTCTCAATGACGAATTATAAAGACAAGCTGATGAAGAAGCATCTTC
TATGCAGATCACTTTACGTTTTTTATCGGTAGgctgaaattgttttttca
actgGCAATAGAAAGCATTTTTGGCTGAGACTGTACTTTCTTCAGTCGGA
GCATAACAGTTTATAATACGAAGACAACAACCGTATACATTTATATCTGC
TACAATTAAGCGAGGGTTCGCTGGAGTAATATCAAGTACATTGATATTAG
GGTCTGATTTGATAACAATTCCAACGCCATGGTGTCGTTTAGTTTGGTAA
CCGCTCCAGTAAACTTCATATTCGTGACGTGCTTCAGTTTTTACAATGGC
AGATCCTTTACAAAGACGTCGTACTTCTTGTAAACCACAGATATAGAGAC
CAGCTTTGTCGATTTCTTCACGACTCTTTCTAATTTTGAGTCGTCTTTCC
CAGTTCTGATATTGACAGTTCCAATTTTCCATTGGTGATAAATTTTAGGC
ATCGATTTTGGAAGATATTCAACCAATATTTAAGGGCGTGAGTGGTCAAT
TCCTCGTCCCGAGACGaataaaaaatctcaaaccatcgTCATCAGTGAGT
CTTTGATGTATTCTTTTGGGCGTGGTGGGTCACCTCCTATTGTGATGTAG
GATTATCGTTCACCACCACACCCTTTTTTCAGTTGCTTGATCTATAAGAA
CAACTTTGACTCAAATTTGGAGTTatggtgtttctttttttttgtctttt
tatactTTAGTTGAATTCTTTCTGATTCTTTCTAGAATTGGATGCTGAAT
TGATTGCTGATGATTCTTCTTCGGTTATACCTGCAAATCTGAACAAAAGT
AAGAATTTGTTGTTTATCCACTACTAATCGTAACGACTTCTTGTCCCGTA
GCTCGTCCACTGAGCTCATCGCGTCGAATTCGGGATATAAAACCACcctt
ttgtaattctttttcaCTCGAGCAGTTTAGACTTCTTATCCATTCTATTG
TGGACAATAAACTTAGTTATAAATTTCaatactgaaaaattatttaccAG
TCACTTTTTATAGTTTAGGTAATGCCTCTGACGTATTTGATTTTGTCTCC
GCCAAAACTCCATCGTCAAGTTTAACTTTCCAAGACGCCTTTGAAGGTGA
GAAAATTTGTCAGTTTCCTTTTAGTGAACATGATAGCAATGATCTTAGGT
TTGGGAATATGTATCTGtatatctttcattttttagggATTTCTGAAATA
CTTATTTCtcttaatttctttcatttagcCACAAAACTGCCAGTGCACAC
GCTACATTCATGTTCGAATCGTGCAGCACAAGTCAAACCTGATGAAATTG
GGTTATTCGTGCAGGAAAACAAAAGCAAGGTGGTGGATCTGGCAACTGGG
AAACTCACTTCGTTCCGTTATGATATTTACAGCAGGAGTAAACGGCAATA
CTTTCGAGATATGGTATGTAACGTCTTTCTTTTATGTGCTAATATCTTCT
GA Coding sequence (CDS) from alignment at sc0000312_pilon:141211..144262+ >XLOC_025748 ID=XLOC_025748|Name=XLOC_025748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=840bp|location=Sequence derived from alignment at sc0000312_pilon:141211..144262+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTGCTGATGACGAACCAGCAACTTCAACTCCAGCTAAAAAGGCACCAGA
ACCTGCCTGCTGATGACGAACCAGCAACTTCAACTCCAGCTAAAAAGGCA
CCAGAACCTGAATTGGATGCTGAATTGATTGCTGATGATTCTTCTTCGGT
TATACCTGCAAATCTGAACAAAAAATTGGATGCTGAATTGATTGCTGATG
ATTCTTCTTCGGTTATACCTGCAAATCTGAACAAAAGTAATGCCTCTGAC
GTATTTGATTTTGTCTCCGCCAAAACTCCATCGTCAAGTTTAACTTTCCA
AGACGCCTTTGAAGGTAATGCCTCTGACGTATTTGATTTTGTCTCCGCCA
AAACTCCATCGTCAAGTTTAACTTTCCAAGACGCCTTTGAAGcCACAAAA
CTGCCAGTGCACACGCTACATTCATGTTCGAATCGTGCAGCACAAGTCAA
ACCTGATGAAATTGGGTTATTCGTGCAGGAAAACAAAAGCAAGGTGGTGG
ATCTGGCAACTGGGAAACTCACTTCGTTCCGTTATGATATTTACAGCAGG
AGTAAACGGCAATACTTTCGAGATATGGTATGTAACGTCTTTCTTTTATG
TGCTAATATCTTCTGAcCACAAAACTGCCAGTGCACACGCTACATTCATG
TTCGAATCGTGCAGCACAAGTCAAACCTGATGAAATTGGGTTATTCGTGC
AGGAAAACAAAAGCAAGGTGGTGGATCTGGCAACTGGGAAACTCACTTCG
TTCCGTTATGATATTTACAGCAGGAGTAAACGGCAATACTTTCGAGATAT
GGTATGTAACGTCTTTCTTTTATGTGCTAATATCTTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000312_pilon | genome | sc0000312_pilon:141211..144262 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 199-420:2831 |
| Aaloc | 121-195:2621 |
| Aaloc | 58-117:2338 |
| Aaloc | 1-54:1 |
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