XLOC_025500 (mRNA) -

Overview
NameXLOC_025500
Unique NameXLOC_025500
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000409_pilon:184995..185893+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025500 ID=XLOC_025500|Name=XLOC_025500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=899bp|location=Sequence derived from alignment at sc0000409_pilon:184995..185893+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagaaacaGAACGAAATGGAGACCGCCGAACGCATCGCTTTCAATGA TTTCTCATCTGCCATTCGGTCTTCACACGAGAAAGAGCGGTCGAGAGTGG AACGCACCAAGTACTGGTCCATCATCGCCTCTGTATCTGGTACTATACTa ggtattcaacttttttgcaacatttaaaaatttgcataattcattcaaat ctttttccaagaaatttcgaattttaacctaaaatgaTCCCTTTGATTTT CTGTGCAGGTTTTGTTCTTTCATCGTTCGTCACTCATTACcgtttgaaga aaattgaaaacgtATCAGAACAAAGATGGATACAATCCTCCAAATCTGTT GAAGACATGTTGTCAAACTTTCATTCCAAAACTATGGAGGAGATCTCAAC GCTTTCGAACCTACAAACAGCCACGCCGAAAGAAGAAGTCAACTCGCAAA ACATGGATGAAGTGCTCGATCATTTGCAAAACCATTTGAATCAAGTAGAC ACTAAATGTGACAAAGCTTTATACATAGTAGATGAAATCAATCAAGAACT TAAAAGAATAAAGTCCTTTGATGGAAACCTGCAACCGCTTCACCATCCTG TGACGTCCACTTCTTCTCAAACCTCCAATATCCAGTCAACCAGCCCAAAC ATTCAAATACTCCAAGATACAAAAACTTCTGATCATAAAAGCTTCCCTGA AAACGATTCAGCTCAGCAGATTCCAACCGTTACACCTCCAGTACCCACTG AAAATCAGGTTGAACACATTGGGGCTATAAACATTGCTAGTCCAACTGGC GGGAACATCACAACGCCTCCCATTAAACAGTACATGCCTCTTCTCATCTT TGTAGGCTCTGGAGCACTATTAATTTACAGTATGATGGGTCAGTTTtag

Coding sequence (CDS) from alignment at sc0000409_pilon:184995..185893+

>XLOC_025500 ID=XLOC_025500|Name=XLOC_025500|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1584bp|location=Sequence derived from alignment at sc0000409_pilon:184995..185893+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagaaacaGAACGAAATGGAGACCGCCGAACGCATCGCTTTCAATGA
TTTCTCATCTGCCATTCGGTCTTCACACGAGAAAGAGCGGTCGAGAGTGG
AACGCACCAAGTACTGGTCCATCATCGCCTCTGTATCTGGTACTATACTa
gatgaagaaacaGAACGAAATGGAGACCGCCGAACGCATCGCTTTCAATG
ATTTCTCATCTGCCATTCGGTCTTCACACGAGAAAGAGCGGTCGAGAGTG
GAACGCACCAAGTACTGGTCCATCATCGCCTCTGTATCTGGTACTATACT
agGTTTTGTTCTTTCATCGTTCGTCACTCATTACcgtttgaagaaaattg
aaaacgtATCAGAACAAAGATGGATACAATCCTCCAAATCTGTTGAAGAC
ATGTTGTCAAACTTTCATTCCAAAACTATGGAGGAGATCTCAACGCTTTC
GAACCTACAAACAGCCACGCCGAAAGAAGAAGTCAACTCGCAAAACATGG
ATGAAGTGCTCGATCATTTGCAAAACCATTTGAATCAAGTAGACACTAAA
TGTGACAAAGCTTTATACATAGTAGATGAAATCAATCAAGAACTTAAAAG
AATAAAGTCCTTTGATGGAAACCTGCAACCGCTTCACCATCCTGTGACGT
CCACTTCTTCTCAAACCTCCAATATCCAGTCAACCAGCCCAAACATTCAA
ATACTCCAAGATACAAAAACTTCTGATCATAAAAGCTTCCCTGAAAACGA
TTCAGCTCAGCAGATTCCAACCGTTACACCTCCAGTACCCACTGAAAATC
AGGTTGAACACATTGGGGCTATAAACATTGCTAGTCCAACTGGCGGGAAC
ATCACAACGCCTCCCATTAAACAGTACATGCCTCTTCTCATCTTTGTAGG
CTCTGGAGCACTATTAATTTACAGTATGATGGGTCAGTTTtagGTTTTGT
TCTTTCATCGTTCGTCACTCATTACcgtttgaagaaaattgaaaacgtAT
CAGAACAAAGATGGATACAATCCTCCAAATCTGTTGAAGACATGTTGTCA
AACTTTCATTCCAAAACTATGGAGGAGATCTCAACGCTTTCGAACCTACA
AACAGCCACGCCGAAAGAAGAAGTCAACTCGCAAAACATGGATGAAGTGC
TCGATCATTTGCAAAACCATTTGAATCAAGTAGACACTAAATGTGACAAA
GCTTTATACATAGTAGATGAAATCAATCAAGAACTTAAAAGAATAAAGTC
CTTTGATGGAAACCTGCAACCGCTTCACCATCCTGTGACGTCCACTTCTT
CTCAAACCTCCAATATCCAGTCAACCAGCCCAAACATTCAAATACTCCAA
GATACAAAAACTTCTGATCATAAAAGCTTCCCTGAAAACGATTCAGCTCA
GCAGATTCCAACCGTTACACCTCCAGTACCCACTGAAAATCAGGTTGAAC
ACATTGGGGCTATAAACATTGCTAGTCCAACTGGCGGGAACATCACAACG
CCTCCCATTAAACAGTACATGCCTCTTCTCATCTTTGTAGGCTCTGGAGC
ACTATTAATTTACAGTATGATGGGTCAGTTTtag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_025500XLOC_025500-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000409_pilongenomesc0000409_pilon:184995..185893 +
Properties
Property NameValue
Aaloc154-792:261
Aaloc1-150:1