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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000431_pilon:22804..27297+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025290 ID=XLOC_025290|Name=XLOC_025290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4494bp|location=Sequence derived from alignment at sc0000431_pilon:22804..27297+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAATCTTTCTCAAATGACGAGCCATTATTGTCAACTAGTCAACAGGTG
AGAATGACGCGCCTTAATTTCATAAAGCTAAAAATTTGATTAGGAAGAAA
CTTGGATCATGATTCAAATTGTGATTTTTCTTACACATGATCCTCAAATA
TTTGCACTAAGTATGTTCCCTcacaaagttttttatttggtATTGAAAAT
AATGTTTCTAGTCTGTActatcaaaaatgttttttagagTATGGGGTGCA
TCTCACCACAATCACACAACTCCCTAAAGACAAAATCATACTTCCTGACA
CCCAAGCTAAAAGCTACAACATCCACACCCAAGACAACACCCTCCTCCAT
CAATAACTCCAACAAAACAGCATCATCAACATCCCAAGTTAACAAGCCCA
TCCAAACACCATTGTCAGTCGTCAACAAGCCCACCCAAACATCATCGTCA
GTCGTCAGCAAGCCCATCCGAACATCATCGTCAGTCGTCAGCAAGCCCAT
CCAAACATCATCGTCAGTCGtcagtaagccaatcaaaaagTCACCATCCA
CTTTATGCAAGCCCATCCAAATAGCCACAAATcataatcaaaattcaaaa
ccaatAGAAAGCCAGACAGCAACCAACCAATCAAGCCTAACTTCAAATAA
TTCATCTAATGATACATCAACCGGGGTGAGAAACTTTCGCTACTTTTAAA
CGCTAATCTCAAATGTCACCCTCATTTCAAATCTTTTAGATCTCAACCGT
CTAAAcctagattttaagaaataCATTTATTATGATTTTGTCCGACAACC
AATATTTCTTTGAGGGCACTTCCCATAAAACACTAATTAAACTTGTCTTT
CACACCTTTCAGACAAGCACCCCTGTAAGATATAAATTGCTATCTGAAAC
TTgatacaaaacataaaaaatcaaatgattcaaaattttctccattCAGT
TAAAACAGCTGGGCGATTGCACACCACACAtttttttAACGGACATGGAG
ATGACAAGAATTAGAGCGAAAACAAATAACATGGCATCTTGGCGcaaatt
tgtaaatttaatCCTGGGTTTAAAATTTACAAAGGACGAACTTAAAAAGT
AAGCAACAATTTTTACTTAATATCACTAGGAAGAGTCACCCATATATCTA
ATTCATAGAAGGCTACTGAACTACAATGTCACCTAAAATAATGAAAGGTT
TCCTAatcatttttgatgtttcttagatgtttctacATGAGGTAAATAAt
gtttgtcaaaaaaataatttgcattaaattgttcaaaaattgattgcCAA
CCTACCCATATGCAGATCAttattttctgatttatttAAGTAGAGTCATC
TTAGGGAGATAAATAACAGCCATTTGTTTATCTCTAGTCAAACccatatt
gaaaaaaaagagtaaAACCTGGGGCAACAGGCTTGTCAACAGCCAAGGAT
TTAGAGATCTTAGTTGACAAATGCAAAATTTAACTCAAActttaataaca
tttttaattttcatctaTTAGAAGTTCAGCTTTAGGATTAGCAGATAAAA
AGACCGGACGAGTAAGACCTGCATTAAATCCATTCATCATTAATGAATTA
TCAAGTAAGTAAAATACTTTCCTCTACCAATgacaattgaaaattgaaaa
tataattccTTTATGTCACCTTTatcctaccttaagggaagaaattttcg
cggaatttaactaaattccgcgaaacacaccagaATTGttaaaccgcgaa
attaaattccgcgaaattcgatttttttcttcttctttcattttgttgtt
tttgaccgggtattaccaaaaaagatggacacaattgatttttaagcatt
acaacgtgaattttttatcaaatataaacaaatataaacaactccgtgat
gcttaaaagttaatctaagttgataaattcttctccatcgcgaaattaaa
ttccgtgaaacttttaaaattggctcattcgcgaaattaaattccgcgaa
atttgccattttgaaactctgatttgcgaaattaaattccgcgaaaattt
cttcccttaaggttaTTCAAGCTGATTTTCTGATACAGAAAAGATAAGTC
Aaatttaactaattgtcccaatttaatttaatttaagagaattaaattta
atttagacattaaGTTCATCCTCTAGCTTTGCTGAATTTGAAATAGCAGT
GTTCGCCAGGCCTGTAGGACAATGAATAATTTTGTCTCACCTAGGAAGGA
AAAggcaatttgtttttttaatcttagctttctcaattgtcattgaacgc
ataagaaaaaaatatatatttttaatcaCCATTGttaatattcaaaacaa
aaatttattttgcaattttgataaCTTCAATTACAaaggagccccccccc
cagcggatcctcaattcacgcaatcacgcaatatttttcgaaattcacac
attcacgcaaattttcttcgagtttcacgcaatcgGAAAATCTTTTagga
aaaatcagggaaacattggaaaatcgggaaaactgcacataatcggtaga
aaaaatggaaaattcatGTATTCACgaacaaaatagcccagattcacgca
ttcacgaaaaagtacattttcacgttcacgcaagttttctCAATtctcac
atttttttttcaattttcacgcattcacataaccagacggtgtcaatcga
acgaatcgaacgtcgaatcaatcgaatgcaattgaacgcaatcgaataat
tgaaattcgattgtcgaacgcaatcgaatcgcaatcgaatattacccagg
atttgctgttcgattgcttcgattacgttcgatcgtattcgattacgttc
gattgattcaattgtattagattttattcgctttagtatggtacttaagc
gctcaatcgcaatcaaactcatcgtacATAATAGTAATCGAACGatatcg
aagattaatccaatgtaattgacaatcaattgattgaaccaatcgaacat
agtcaacaatcaattgaaccaatctaaccttactcgaacgcaatcgaata
ttacccagcaATCGgccattcgattgagattcgattacgttcgacaatcg
aatcgcaattattcgaccgcgttcgattacgttcgattggttcgattgcg
atttttgttcgaagttgttcgattgacaccgtctggacataACCGAAAAT
GtccattcacgcaatcacgcaaaccgctggggggggtgCACATAGTGTAC
TGAAAGTTAGGGCCACAATCACAAATTACTGGTGTTCGCATTGTTTgagg
caaaaaaaaagtgagcCAGTTggtcagtgaaaaaaaaatataaaaattga
ctttcaaacTATGACTTAAGCAGAAATCAAATTTCTTGCCATATATTGGA
AAAGCCAAGATTTTCTCATGAAAAATCTTAATAAATGCTACGGAAATCGT
GAATTTTTTCAGAAGCAAACTGCTATGGAAAATCCATCCACAGGGGGGAG
GTAACGGGTTATAACTTAAACCGCCCAAATATGGCAGATGAAGGGAAGGA
TAAAACTGGATAAAATTCAACAATTATGTAAGTTTCCAACTCAAAATAAT
tggaaaattaggaaaaattaTCAGTCAGCTGGGCAGCGTGAACACAAGTT
ACTCGCGATTGTGGCCTTAGGATGCTAGTGTAGGCTGTGAACATTTCATT
TTGTGGCTTTTTATTGCTACGTtgtttaaatctaaaaaacagCCCAAAGT
TTAAGTATCGTGCTCCCTTGTTTGATAGCCCGCACAAACCTTGCATTTTC
GTTGAGTTATTTTTCTCTGAAGAAAGTCCAATCACATTTTCCATGACACG
TTTGAGTATGAACAATTCTTCCTAGTTTCATACCAAATCActtaaaatat
tcctttttCATAGCAAAAGCATTTATAGTAATTTTGCTGAGAATTCATTT
TAGTTTCTTCTCCTGGTAAGTAAGCATATAGGTTTTGTACTTTCAGAAGT
TGACAGAGgactaataaaaataaagacTTACCTGAATGATTATTTATCAT
GATTTTGCTCAATTTTAGCATATACAACAAGGAGGTGGCCATTTGGTTCA
GCAGGAGGATGCAGAGAAACTGATGTTACCAAAGTCATCAATGTCAAGTG
TAACACTGCACGAAAGCCACGTAAGTAGTTCATTGTAGAtgataaaagag
atttttgtaGATTGCTGcagttttattaaaaattggaaatttctgACTTC
GATTCACGGCTTCGCTTCTTGGGGAAAGAAGTAGATcacgtttgtttgtt
ttgatcaatCGTTCCATTTTGTGTACTTTACAGAATGTTTTATAAAGGGT
CTTTTACATAACGCAATAAAAAGTCTAATGCACAATGTTTATTTTGCCGA
ACAGTAGCGCATTTTCATTGGCAGTATACGCGGgattttttctctttcag
cTTCAAGCAAAAAGTCGAACGCGGATGACGAAGCGGAAGAATAA Coding sequence (CDS) from alignment at sc0000431_pilon:22804..27297+ >XLOC_025290 ID=XLOC_025290|Name=XLOC_025290|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1656bp|location=Sequence derived from alignment at sc0000431_pilon:22804..27297+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAATCTTTCTCAAATGACGAGCCATTATTGTCAACTAGTCAACAGGAA
AATCTTTCTCAAATGACGAGCCATTATTGTCAACTAGTCAACAGTATGGG
GTGCATCTCACCACAATCACACAACTCCCTAAAGACAAAATCATACTTCC
TGACACCCAAGCTAAAAGCTACAACATCCACACCCAAGACAACACCCTCC
TCCATCAATAACTCCAACAAAACAGCATCATCAACATCCCAAGTTAACAA
GCCCATCCAAACACCATTGTCAGTCGTCAACAAGCCCACCCAAACATCAT
CGTCAGTCGTCAGTATGGGGTGCATCTCACCACAATCACACAACTCCCTA
AAGACAAAATCATACTTCCTGACACCCAAGCTAAAAGCTACAACATCCAC
ACCCAAGACAACACCCTCCTCCATCAATAACTCCAACAAAACAGCATCAT
CAACATCCCAAGTTAACAAGCCCATCCAAACACCATTGTCAGTCGTCAAC
AAGCCCACCCAAACATCATCGTCAGTCGTCAGCAAGCCCATCCAAACATC
ATCGTCAGTCGtcagtaagccaatcaaaaagTCACCATCCACTTTATGCA
AGCCCATCCAAATAGCCACAAATcataatcaaaattcaaaaccaatAGAA
AGCCAGACAGCAACCAACCAATCAAGCCTAACTTCAAATAATTCATCTAA
TGATACATCAACCGGGCAAGCCCATCCAAACATCATCGTCAGTCGtcagt
aagccaatcaaaaagTCACCATCCACTTTATGCAAGCCCATCCAAATAGC
CACAAATcataatcaaaattcaaaaccaatAGAAAGCCAGACAGCAACCA
ACCAATCAAGCCTAACTTCAAATAATTCATCTAATGATACATCAACCGGG
TTAAAACAGCTGGGCGATTGCACACCACACAtttttttAACGGACATGGA
GATGACAAGAATTAGAGCGAAAACAAATAACATGGCATCTTGGCGcaaat
ttgtaaatttaatCCTGGGTTTAAAATTTACAAAGGACGAACTTAAAAAT
TAAAACAGCTGGGCGATTGCACACCACACAtttttttAACGGACATGGAG
ATGACAAGAATTAGAGCGAAAACAAATAACATGGCATCTTGGCGcaaatt
tgtaaatttaatCCTGGGTTTAAAATTTACAAAGGACGAACTTAAAAAAA
GTTCAGCTTTAGGATTAGCAGATAAAAAGACCGGACGAGTAAGACCTGCA
TTAAATCCATTCATCATTAATGAATTATCAAAAGTTCAGCTTTAGGATTA
GCAGATAAAAAGACCGGACGAGTAAGACCTGCATTAAATCCATTCATCAT
TAATGAATTATCAACATATACAACAAGGAGGTGGCCATTTGGTTCAGCAG
GAGGATGCAGAGAAACTGATGTTACCAAAGTCATCAATGTCAAGTGTAAC
ACTGCACGAAAGCCACCATATACAACAAGGAGGTGGCCATTTGGTTCAGC
AGGAGGATGCAGAGAAACTGATGTTACCAAAGTCATCAATGTCAAGTGTA
ACACTGCACGAAAGCCACcTTCAAGCAAAAAGTCGAACGCGGATGACGAA
GCGGAAGAATAAcTTCAAGCAAAAAGTCGAACGCGGATGACGAAGCGGAA
GAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000431_pilon | genome | sc0000431_pilon:22804..27297 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 787-828:4453 |
| Aaloc | 685-783:4071 |
| Aaloc | 601-681:1523 |
| Aaloc | 451-597:950 |
| Aaloc | 268-450:493 |
| Aaloc | 49-264:241 |
| Aaloc | 1-45:1 |
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