XLOC_025196.4 (mRNA) -

Overview
NameXLOC_025196.4
Unique NameXLOC_025196.4
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000403_pilon:133018..134412+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025196.4 ID=XLOC_025196.4|Name=XLOC_025196.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1395bp|location=Sequence derived from alignment at sc0000403_pilon:133018..134412+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCATCCCTCTGGTGAatgaccaaaatgaaattgaaatgatcGATGTGGA AGCCAATGGTACGTGTTTGAAAATGAGAGTCGACTCCGGATGCAGAAAGA CTCTGATCCCAGAAAAAGACTTTCGCAAGTTTGCCAACACGACCAGACTG TATAAATCGAAAGTGAAGCTCCGCCCGTATGGTACTAAAGACCTGCTGCG AGTGAAGGGTAGGGCAAAGATCGAACTGACCACTAGCAGTGGAGCAACAG CCGAGCAACTCGTTTACGTGATAGAAGGAAACCACACGGAACCGCTCTTA GGTTTAGAAGCATCGTTAGAGCTCGGTGTCTTGGAGATTCACCCAGAAGG CCGCAGAGACGCCAATGATCCGGAAACGCCAGTATACCACATCAACGAAC CAGAGAAAGTCCCAACTTCAGTGACTGAAATCATCGACAAGCATCAACCT ATCTTTGAGGGAATCGGCAAGttcaataaatcagaaataaactTTGATAT AGACGGATCGATCAAACCAATGATACAGAAGGAGCGGCCGATACCGTTCG CTTTCAGAAAACAAGTCACGAGCCATCTCAAAGAACTTAGAGACAATGAC ATCATCGAAGGCCCGTTAGACCCAAGTGTTAACCTCGACTGGATCTCGAA CGTTGTCATTACAAAGAAACCATCCGGGCAGATACGCATGAATTTAGACA TGCGTCACGCAAATATTGCCATCAAAGAAAGCCATATTCCCGTACCGACT GTCCATTCCTTGCGTCACAAGCTTAACGGCGCCAAAGTATTTACAAAGCT GGACATGAAACATTCATTTCATCAAATGCCACTCGGTGAGAAATCGAAAG AACTTACAAACTTTTACACGCACGAAGGCATCTACCGATTTAAGCGTCTT GTCATGGGTGCTGGACCCGCCAGTCAAGAGTTCCACGAGCGTTTGCGGCA AAGTATTGTAGACCTCGTTGGTGTGGAACAGATTGAAGACGATTTGCTAG TTTACGGAGAGACCCAGCATGAGCATGACCTCCATTTGAGTGCTCTACTT GATCGATTACAATCCCTCGGCTTAACACTTAGACGAGAGAAATGTGTGTG GAGTGCTCCAGAAGTTATTTGGTTTGGGTATAAGTTTTCCAGCGAAGGTA TGTCTGCAGATCCATCGAAAGTAGAGACTATCGTCAGACTCGCACCACCA ACCAACGCAGCGGAAGTAAAAAGTTTCTTGCAGATGTGTCAATATAACGC CCTCTTTATGTTTGGAGAGCCAGAGACTTACAGTGACATTACAGCACCGT TAAGAAATCTAACGCGTAAGAAAGTTCCATTCCACTGGGATCAAGCTTGT CAGGACGCATTCGACAAACTGAAAGAGGGTTTATGTAGCAACCGA

Coding sequence (CDS) from alignment at sc0000403_pilon:133018..134412+

>XLOC_025196.4 ID=XLOC_025196.4|Name=XLOC_025196.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=774bp|location=Sequence derived from alignment at sc0000403_pilon:133018..134412+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCATCCCTCTGGTGAatgaccaaaatgaaattgaaatgatcGATGTGGA
AGCCAATGGTACGTGTTTGAAAATGAGAGTCGACTCCGGATGCAGAAAGA
CTCTGATCCCAGAAAAAGACTTTCGCAAGTTTGCCAACACGACCAGACTG
TATAAATCGAAATTCATCCCTCTGGTGAatgaccaaaatgaaattgaaat
gatcGATGTGGAAGCCAATGGTACGTGTTTGAAAATGAGAGTCGACTCCG
GATGCAGAAAGACTCTGATCCCAGAAAAAGACTTTCGCAAGTTTGCCAAC
ACGACCAGACTGTATAAATCGAAAGTAGAGACTATCGTCAGACTCGCACC
ACCAACCAACGCAGCGGAAGTAAAAAGTTTCTTGCAGATGTGTCAATATA
ACGCCCTCTTTATGTTTGGAGAGCCAGAGACTTACAGTGACATTACAGCA
CCGTTAAGAAATCTAACGCGTAAGAAAGTTCCATTCCACTGGGATCAAGC
TTGTCAGGACGCATTCGACAAACTGAAAGAGGGTTTATGTAGCAACCGAG
TAGAGACTATCGTCAGACTCGCACCACCAACCAACGCAGCGGAAGTAAAA
AGTTTCTTGCAGATGTGTCAATATAACGCCCTCTTTATGTTTGGAGAGCC
AGAGACTTACAGTGACATTACAGCACCGTTAAGAAATCTAACGCGTAAGA
AAGTTCCATTCCACTGGGATCAAGCTTGTCAGGACGCATTCGACAAACTG
AAAGAGGGTTTATGTAGCAACCGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_025196.4XLOC_025196.4-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000403_pilongenomesc0000403_pilon:133018..134412 +
Properties
Property NameValue
Aaloc163-387:1171
Aaloc1-162:1