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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000292_pilon:379989..383893- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024777 ID=XLOC_024777|Name=XLOC_024777|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3905bp|location=Sequence derived from alignment at sc0000292_pilon:379989..383893- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGCTCCTGCACTTTCAGATGAAGATTTTAACAGACTCCAGGTAAC
ATTGTCATTGATCTTATATTGTTTATTTCTTACTACAATTAATTTATGTA
TTTTCTCCTGAATGCAAATACGTCTATTTACGTACGTTTATTTTCCAGTC
ATCGCAAACACTGGTTAAGACTTAAAGACACTAAAGTGTGGCTAAACGAA
CAATCAATGCTCTTGATAGGGCGGTGGTTTATATAATTTTTTAGGCGTAT
CCCAATCCCTCTAAGCCATTTTTTCATGTGAAAATTCTCAATTATACGTC
TTGATTTGCGAAAGTTTATGCTCGCAAAAAATATTTTTCCGTTAAATTTG
CGAAGTAATGCAATTTGCAGTTTTCGTTTCATGAAAGTTCTGCTCGCAAA
AGTTTGTACGCCTATTAAATGTATTAAATGATAAAAAATCTATATTAACT
GTCTCGCTGCGTCAGGACCGCCAAAAAAGGTAAAGCTGACCGCAATCACA
ACAATTTCATAAATCTTCTCAAACTCAAAATATGTCCTTTTCAGGTTCGA
CATCATTACAGTACCCTTACTTATAACCTCTACTTTTTCATAGCTAGGGA
AATTTGCGGCTAGTTCGAAAACAGGGTCAGGGGTCACGGTGTCCGGGTCA
CGGGGCACGGGTCACTACGTCATTTTTTTAAAGCCTCTTCGTAGGAGAAT
GTGTTTTTCTATAAGGAATTTTTAATAACACTTCATGGCAGATTAAAAAG
ACAATCAGAAAAAGAAAGCATTTCATTTTCGCATTTATGGGGAAGAATGA
AATTTTCAGAAGATACTTTATTTGATATGATTTGATAGGATTCCCATTTC
TGTAAATTTGTGATTCCCATGGTTGCTAAATGGTGGCTAGGGGTATTTAT
TTGTTCTTTTGCTATTTTCTTTTGTTCTATGTGACGTAAAACGCTTCACA
AATCGAAGTACTTCCACCAACTGTTTTTGCGACCTCTGATTTCTCTGGGC
TAGGGCCAACCCCACCCAAGTCAAATTCTACTTTGTAAAAGTCATTGGAG
AACAGGACAGTGTTTTGTCTTATTTTTCTGAGCACTTTTTTATGGATACC
AGTCATTGATTAAGTTTTTGAAAAACGTCTCTTTACCATGATAATTTTAA
AAAGCCTGCTTTGCTCCCTGTCATTTGTGAGAAATTTTAAGTGTATTTTT
ACTTTTATGACAAATTATACAAATTATGTGCTGTAATTTGGTCTAATGTC
TGCATTCCTCATGTAATTCCACCACCCTTCTTTAAAGAATTAAAAAGTAG
GTGGGAATCACTGATTGAAATTTCTTTCCTGATAGTTTATTAGCAATCAG
TGATTCCAACCTTTTATTATTTCCAGGTTTAAAGAAGGGTGTCAGAATTA
GATATGTTAATGTGTTGTTGGGATGTTGACATCAGACCAACTTACAGTAT
TTTCCAAGAAAAATGAATGAGACTATTTTCTTGTAAATTGAATGAAACAT
TAACTAAAACTGATTAAAAATATTTTCCTGTATTTTCTAAGGAAAATTAT
ATACCTTAAATAGTTGTATTTTCCAAGGAAAATTAGATATTTTAAAACTT
ATTTATTGTTCTATTTATTAAAAATGAACCAAGCAGTACACCATAAACAT
ATTAATTTCCATTCTTAGTGAAGACACAATGAGATGACCAAACTTTAATT
TTAAAGCGACTGATTGATAAAACCTAGGTAAATTCTTTTTATTCAGAATC
AACTGATCGAACTACGCACACAGAATTATGAACTCGGAAATAAAGTGAAG
AAATTGGAAACAGGTAATTTTTTAAATAATTTTAAATAATAGCTTTCCAG
TATTATGATGTTATGTATGTTACGAATAAAAAATTCCTGTCAAATTATAT
TCACTTTGGGTGGTATAATGCAGGTGTATGCATTTCATCCTTATTGAGAA
CATGCAATGCATTCTGCTCCTTGACTGGCCGAATCAATCTTAGCATCTCA
ATTAATTGTGGCTCAAACCTAGAGAAATAGTGGATAAGACAAATATAATA
TAGAGAAAGGATGAAAAATTTCTTTTATTACTCTAGCATGGTTTGATTTT
GTGATTTTTTATTCTCTCACTATTCAACCTTCTTATCCTAAGGGAACTAC
TGTCTGAAGCCTGACATTTTAGTTAAAGAGTTGAACCCCTGTTTTTTTAT
TTTAGAAAATGCCGGTCTTAACGAGAAACATACAGTGCAGGAGAAAGAAA
TCACTAAGCTCCAAAGACTATCGAAGTTTCCTGGTTTTCAGGTGAGAAAT
GTAGGCTTTTTTTTAATTTTTCATCTGAGTCTGCTTTGCTATGCAAAAAA
TTAACCAACATGAAGGCTTCGTAGTTCAATAATATGAATAATAATTTGAA
AGATTTCATCGTCATTGCTTTTGTTTAATTGGTCATGGTTTCAATTATGA
GTCAAGTATACAAATTTTTCTTATCTTATCCGTGCTGTATACGAAGAGTA
AAAATATTGTTTTCTTTAAAATTTCTAGGCCATCACAAAAAGCAAATCTA
AAAAGGTAACTATATCTCATATCTCAAATATATCCCAAACATCAAATAGG
TTTTAATAAAACACCAAAAGGTTATCCAGATAAAAATTTGAGGAATTTAG
TACATTGGTATTAAAATTAGCAATTTTATAAATTTCATAAACCTTTTTCA
CAATTTAACAAAAAAAGTTTGGGTTTTTTATTTAGTCAAATAAATGTCCA
AAATATTTGCAATGTCAGTATTATTGCTGTTCACTTTTCTTATGTCACAT
TCCCATTTTTGTTTAGCATTAAATTCACATATAATTAAAAAATCTGTTGC
AATTTGTGGGCAAGGGTGGGGGGGGGAATGTTTAAAGGTTGGGGGGGGGG
GGTGGAATGCCAAGAAAAGTTATAAGGGGGTTTGGGTGTCCAAGCTTTTT
ACTGCCGTCATTTAAGACAATTTCTGCTGATAGTTGATGAGTTTCGATGC
CGTCCATTTCCTTTGAGATGAATAAATGATGATGTTATGAAATTTTGTTT
GAAAGGAGTTAGGTTAAGAATAAGTCACCTTTCCTAAAGATATTTCACAT
ATATTTTTGTTAGCAATTTTTGTCCAAAATCCTTGGGGAATATGTATTTT
TAAAGATTCCCCCCGAATGCCAAGAAAGGGGGGGTGTCATTTAAGACCCC
TTTCTGCACCTCCTGTTTTTACTGCCGTCATTTCAAAGAATGTATAATGA
TAGTTGATGTTCGTTATGGTTAACACAAATTTTTTGAAAATCATGAAAAT
GTCTAAGATATAGATTTTCAAAAGGTCCAGTCTATCTTAAAAATTTGGTT
TTTGTTTACTGACACTTCTAAATTTTTATCTGGCCTGCCTACAACAACAA
TCCTAACCAGACATTATTTTCAAATCTTTTAGGACATTGCAGAATTGATG
GAAGAGAATGAGCGTTTGTCACAACAAATGCAGGTATGATTAATCCATGT
CTAACAGTCTCTCACTCACATTAAAAAAATGTAATAGGTAACTTACCCTT
TCTTTACTTAGAACCCTTTTCAAAATTCTTCTACAACACTTTTACACTAA
CTGATTGGTTACAAGTGATGTAGTTGGTAAAAAAAAAATAAAGATAATTG
TATGGAAAATTTGGCTTAGCTTACAAGTTGTTTTTTTTTCCTTATAAGTT
GCTCAGTGCTTCAAAATGACGTGGCCTTTTCAAAAGAGGATTTCTGGGGA
CGTCTCTTAATTTGCTATCCTCAGTTAAAAACAGCTCCAAAAAGAAACCA
AATATTAAATCTAAGCTTAAAGAGGTCACCCTCTCAGAAGAATTCTACTT
TTATTTCTATTTTCCTTTCCTTTTACAGAGACATGAAGACGACTTCAAAT
TACAG Coding sequence (CDS) from alignment at sc0000292_pilon:379989..383893- >XLOC_024777 ID=XLOC_024777|Name=XLOC_024777|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=606bp|location=Sequence derived from alignment at sc0000292_pilon:379989..383893- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGCTCCTGCACTTTCAGATGAAGATTTTAACAGACTCCAGATGGC
CGCTCCTGCACTTTCAGATGAAGATTTTAACAGACTCCAGAATCAACTGA
TCGAACTACGCACACAGAATTATGAACTCGGAAATAAAGTGAAGAAATTG
GAAACAGAATCAACTGATCGAACTACGCACACAGAATTATGAACTCGGAA
ATAAAGTGAAGAAATTGGAAACAGAAAATGCCGGTCTTAACGAGAAACAT
ACAGTGCAGGAGAAAGAAATCACTAAGCTCCAAAGACTATCGAAGTTTCC
TGGTTTTCAGAAAATGCCGGTCTTAACGAGAAACATACAGTGCAGGAGAA
AGAAATCACTAAGCTCCAAAGACTATCGAAGTTTCCTGGTTTTCAGGCCA
TCACAAAAAGCAAATCTAAAAAGGCCATCACAAAAAGCAAATCTAAAAAG
GACATTGCAGAATTGATGGAAGAGAATGAGCGTTTGTCACAACAAATGCA
GGACATTGCAGAATTGATGGAAGAGAATGAGCGTTTGTCACAACAAATGC
AGAGACATGAAGACGACTTCAAATTACAGAGACATGAAGACGACTTCAAA
TTACAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000292_pilon | genome | sc0000292_pilon:379989..383893 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 277-303:28 |
| Aaloc | 226-276:474 |
| Aaloc | 199-225:1378 |
| Aaloc | 115-198:1699 |
| Aaloc | 46-111:2160 |
| Aaloc | 1-45:3906 |
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