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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000366_pilon:200982..204647- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024694 ID=XLOC_024694|Name=XLOC_024694|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3666bp|location=Sequence derived from alignment at sc0000366_pilon:200982..204647- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTAAAAAACCAAGTGAAAAATCAAAATCTACTGATGGTGGAACTAC
TTCTGGAAATGAAACACTAACTGTTACTTACGAGCAGTTGAGAACTCTGG
TTAACGATGTTGTTGAAAAAGACTTTGGCCCACAAATCATGAAAAGCACC
AAAGACACAGTGAAAGCTGCTTCTGTGCAATCTGCTGAGAATCATTCGAC
CAATCTGGCTAAGCTCAAAAAGAAACTCGAAAGAAAGAGAGCCAACGACA
ACATCGTACTCAAGAAAACCGGCCATCAAGATCAATTTGCTCATAATACA
GCAGTCTTGGAAACGATTGAGGATACCCTCGAATTCATGGAAGAGACGGA
TGTTGATGGGATGAAAGAAGCTTTAAATAAAGGTAAGAGATTACTAGAGA
CTCGTATTCAACATATTAGAATCGCCGACACACACGGGTGGCTTACTGTC
AACGAATTTAAGACAAGCGATCTTACCTCCGGAGACGTGGAAGAAAAAAG
GCTTAAGAGGGCTATTAAAAACGCAGAGCAAGTTAAACAACGTATTTATA
AAAAGCCAAGAATAGAGGAACCTAATAGAGAATACTCCAAGGCAATCAAA
TCTAGAACTGAACAAAGGAGCCGTATGGATGAGGTGGTATGTTATTCATG
CAAAAGAGTAGGACACTACGTCAGCCACTGTCCTTTTCCTGCATCTTCGT
CACCTTTGGCCTACTCGACAAAATTAATGTCCTCATCAACAGCAACAAAA
AGTTCATCGTCCAATTCAAATTCTAAATCGTCAAGGGATGGAAAATAACT
TTAACAAAAAATATAAAATTTCAGAACATTCTTTTTCAACTTTTGAAATA
CAGTAGCTATTTTACATTGCGTTAGTTTTTAAAAATTGATTACAATTTTG
TCTTGTTGTAATTAGATTAGTATTGATCTGAGCTCATAATATAAATGATC
TAACTTCTCTCCTTCGTTTCGCTAAATTACCTCAATTATATATAAATTGT
TTTGATTCCTCCACTTTGATTTATACAGAAAACGTTTCGTTTTACTTAAT
TAATTTTCTTTGAAAGACTGTTAAGCCATTTGTGCTTTCTTTTCATTGCA
TCACATTTTCGTTTGATACCACTACAGACCGATTTTGGGAATTCGAACAA
TCTGCTGAAAGTATCTCCGTCGCCGGAAAGATTCAAAAATTTTCAGAATT
TTGGGAAAAAGACTTGAAAGCATCCAACTTCGCCTTGAATATCGTACACG
AAGGATACAAAATACCTTTCGAGTCAGAACCACCAAAATTTTTCGCAAAA
AACAACGCTTCCAGTCTAAAAAATCGAACTTTCGTTACGGATAGTATCAC
ACAACTTTTAAAGGACGATTGCATCAAAAAAGTCGACGAACCGCCTCATT
GTGTTAATCCTTTGACTGTTGCAGAAGGAAACTCAAAACTAAGACTCGTT
CTGGACCTTAGACACGTCAACAGATATATCAAGCCAAAAAAGTTCAAGTA
CGAAAACTTAAAACAGGTTTCAGAACTCACGAACAAAAACGACTTTTTAA
TTACTTTCGATCTTAAGAGTGGGTATCATCACGTTCCAATCAATCCAGAT
TTTCAAACTTTTTTGGGATTCGCCTGGGACATCGACGGCAAAAGACAGTA
TTTCGTATTCAAAGTCTTACCATTTGGGCTCAATATAGCATGCCTAGTGT
TTACAAAGCTTATGCGACAGCTTGTTAAAAGATGGCGCTCTATGGGAATC
AAATGTGCAATGTATCTCGATGATGGTATAATTGGGAATAATTCTTATAA
TTCCCTGATTACAATGAGAGATCTAGTGCTAAACGACCTACAATCTGCAG
GGCTGACCGTTAACTTTACAAAGTCGAGTCTAGTACCCGGGCGTACAAAA
ACTTGGTTGGGTTTTGAAATAAATACAGTCGATATGAACTTTGAAGTGCC
AGCATCAAAAATTCAAAAACTTTTGAAATTAATTTCACAAGCATTAGAAA
ACGAATTTCTATCAGCAAGAGAAGTTTCCAGAATCGCAGGCAACCTTATT
TCCATGGCAATCGCAATAGGCCCGCTTGTCTATTTGCTTACAAAACAAAT
GTACAAATTCATAGCTTCAAGTTTCTCTTGGGATAAAAGGCGATTAATAA
ATTTTGACGTTATTCAAGAACTTCAATTTTGGCAAACCAATTTAAAAAAC
GTAAAAGCTTTTAGAATTAAAACCAAACCAGAAATTACGAAGATCATCTT
TTCGGATGCAAGTGGTACCGGCTATGGAGGTTACGTGGTAGAAAAGTTAG
GAAACATCATAGCAAAAGGAAATTTTTGTAAACAAGAAATACAAACTAGC
TCAACTTTTCGTGAACTTCTTGCAGTTAAATATATTTTGATGTCCTTTCC
TAAACTTCTCGAAAACGAAATAATTGAGTGGTTCACGGACAACGATAATA
TTTGTAAAATAATCAGCCGCGGTAGTACAAGACAACACCTACAAAATCTT
GCAATAGAAATTTTCAACCTCTGCTTATCCCACAACGTCGAAATTTACCC
TACTTGGATACCAAGGGACATGAATAAAACAGCAGATTTAATTTCCAAAT
CTATGGACACAGATAATTGGTCTATCGATAATGAGACTTTTAATCACATA
ATCAAAAACTATGGACAAATTACCATAGATCGATTTTCCGATAACCAAAA
CGCTAAGTCAACTGTTTTTAATTCTCGTGAGTATTGTCCAGGAACATCCG
CCGTCAACGCTTTTTCCTGTAATTGGGGAAACAATGAGTTCAACTGGCTT
TGTCCTCCAATATCCCTCGTGGGTAAGACAATTCAGCATCTGAAAAATTG
TAGAGGTAAAGGCATATTACTTGTTCCATTGTGGCCTTCTTCTTACTACT
GGCCATTGCTGACATCGAACGGCAAAGAATTCGAAGTTTTTGTGAAAATG
TTTTTAGTACTCGACCCTTATTATATCAATTATTCTAACACAAAATGTAT
ATTTGACGGATTTGCAGGCTTCTATTCTGTAGCATTATATATCGATATGT
CCCAATAAATATTCAGTATTATTAAATTCCTAGTTATATCTCACTATTAC
CCCATCTAACACACTCATTTTTCATTCTTTTTATGTTGACAAACTTGGTT
ACATTTGCAAGATTTATTACATCACGATCAACGTTACACGTGGTGTGTTT
TATGTGCCAATGCCTCTGTGCAAACACGTCTTTCGCGTCAATGTCTCTGT
ACAAACGTATTTGAGGAGTTCGTTCTCCATCTTGAAGCCCATCGTCTTAC
AGATGGCAAAGTGCAAAGGTACGAAATTAACTATTTTTTTTATTTCATTT
TTCGACAGATCATGCCCCCCCCAAGTTTGAAAGAAAAACTCGCAACAATT
AGGAACGAAAGTTTGAAACAAAAAGCCGAAGGTCTTCCCGTTTTATTAGA
ATCAGCTTACGCCAAATCCACTTTGAGGAAGTACAAACCTGCTTGGGAAA
AATGGGTGTCTTGGGCTGGTCCATTCGACGAGGTAAACTGTTGTCCTGCC
GACCCTTTTTACGTAGCGGTATATCTAAACGATCTTACGAATTCACTTGC
AACCGAAGGAACATTGACCGCAGCTATTCTAGGAATCAGATGGGGGCACT
TAACCTCAGGATTTGA Coding sequence (CDS) from alignment at sc0000366_pilon:200982..204647- >XLOC_024694 ID=XLOC_024694|Name=XLOC_024694|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4968bp|location=Sequence derived from alignment at sc0000366_pilon:200982..204647- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTAAAAAACCAAGTGAAAAATCAAAATCTACTGATGGTGGAACTAC
TTCTGGAAATGAAACACTAACTGTTACTTACGAGCAGTTGAGAACTCTGG
TTAACGATGTTGTTGAAAAAGACTTTGGCCCACAAATCATGAAAAGCACC
AAAGACACAGTGAAAGCTGCTTCTGTGCAATCTGCTGAGAATCATTCGAC
CAATCTGGCTAAGCTCAAAAAGAAACTCGAAAGAAAGAGAGCCAACGACA
ACATCGTACTCAAGAAAACCGGCCATCAAGATCAATTTGCTCATAATACA
GCAGTCTTGGAAACGATTGAGGATACCCTCGAATTCATGGAAGAGACGGA
TGTTGATGGGATGAAAGAAGCTTTAAATAAAGATGTCTAAAAAACCAAGT
GAAAAATCAAAATCTACTGATGGTGGAACTACTTCTGGAAATGAAACACT
AACTGTTACTTACGAGCAGTTGAGAACTCTGGTTAACGATGTTGTTGAAA
AAGACTTTGGCCCACAAATCATGAAAAGCACCAAAGACACAGTGAAAGCT
GCTTCTGTGCAATCTGCTGAGAATCATTCGACCAATCTGGCTAAGCTCAA
AAAGAAACTCGAAAGAAAGAGAGCCAACGACAACATCGTACTCAAGAAAA
CCGGCCATCAAGATCAATTTGCTCATAATACAGCAGTCTTGGAAACGATT
GAGGATACCCTCGAATTCATGGAAGAGACGGATGTTGATGGGATGAAAGA
AGCTTTAAATAAAGACCGATTTTGGGAATTCGAACAATCTGCTGAAAGTA
TCTCCGTCGCCGGAAAGATTCAAAAATTTTCAGAATTTTGGGAAAAAGAC
TTGAAAGCATCCAACTTCGCCTTGAATATCGTACACGAAGGATACAAAAT
ACCTTTCGAGTCAGAACCACCAAAATTTTTCGCAAAAAACAACGCTTCCA
GTCTAAAAAATCGAACTTTCGTTACGGATAGTATCACACAACTTTTAAAG
GACGATTGCATCAAAAAAGTCGACGAACCGCCTCATTGTGTTAATCCTTT
GACTGTTGCAGAAGGAAACTCAAAACTAAGACTCGTTCTGGACCTTAGAC
ACGTCAACAGATATATCAAGCCAAAAAAGTTCAAGTACGAAAACTTAAAA
CAGGTTTCAGAACTCACGAACAAAAACGACTTTTTAATTACTTTCGATCT
TAAGAGTGGGTATCATCACGTTCCAATCAATCCAGATTTTCAAACTTTTT
TGGGATTCGCCTGGGACATCGACGGCAAAAGACAGTATTTCGTATTCAAA
GTCTTACCATTTGGGCTCAATATAGCATGCCTAGTGTTTACAAAGCTTAT
GCGACAGCTTGTTAAAAGATGGCGCTCTATGGGAATCAAATGTGCAATGT
ATCTCGATGATGGTATAATTGGGAATAATTCTTATAATTCCCTGATTACA
ATGAGAGATCTAGTGCTAAACGACCTACAATCTGCAGGGCTGACCGTTAA
CTTTACAAAGTCGAGTCTAGTACCCGGGCGTACAAAAACTTGGTTGGGTT
TTGAAATAAATACAGTCGATATGAACTTTGAAGTGCCAGCATCAAAAATT
CAAAAACTTTTGAAATTAATTTCACAAGCATTAGAAAACGAATTTCTATC
AGCAAGAGAAGTTTCCAGAATCGCAGGCAACCTTATTTCCATGGCAATCG
CAATAGGCCCGCTTGTCTATTTGCTTACAAAACAAATGTACAAATTCATA
GCTTCAAGTTTCTCTTGGGATAAAAGGCGATTAATAAATTTTGACGTTAT
TCAAGAACTTCAATTTTGGCAAACCAATTTAAAAAACGTAAAAGCTTTTA
GAATTAAAACCAAACCAGAAATTACGAAGATCATCTTTTCGGATGCAAGT
GGTACCGGCTATGGAGGTTACGTGGTAGAAAAGTTAGGAAACATCATAGC
AAAAGGAAATTTTTGTAAACAAGAAATACAAACTAGCTCAACTTTTCGTG
AACTTCTTGCAGTTAAATATATTTTGATGTCCTTTCCTAAACTTCTCGAA
AACGAAATAATTGAGTGGTTCACGGACAACGATAATATTTGTAAAATAAT
CAGCCGCGGTAGTACAAGACAACACCTACAAAATCTTGCAATAGAAATTT
TCAACCTCTGCTTATCCCACAACGTCGAAATTTACCCTACTTGGATACCA
AGGGACATGAATAAAACAGCAGATTTAATTTCCAAATCTATGGACACAGA
TAATTGGTCTATCGATAATGAGACTTTTAATCACATAATCAAAAACTATG
GACAAATTACCATAGATCGATTTTCCGATAACCAAAACGCTAAGTCAACT
GTTTTTAATTCTCGTGAGTATTGTCCAGGAACATCCGCCGTCAACGCTTT
TTCCTGTAATTGGGGAAACAATGAGTTCAACTGGCTTTGTCCTCCAATAT
CCCTCGTGGGTAAGACAATTCAGCATCTGAAAAATTGTAGAGACCGATTT
TGGGAATTCGAACAATCTGCTGAAAGTATCTCCGTCGCCGGAAAGATTCA
AAAATTTTCAGAATTTTGGGAAAAAGACTTGAAAGCATCCAACTTCGCCT
TGAATATCGTACACGAAGGATACAAAATACCTTTCGAGTCAGAACCACCA
AAATTTTTCGCAAAAAACAACGCTTCCAGTCTAAAAAATCGAACTTTCGT
TACGGATAGTATCACACAACTTTTAAAGGACGATTGCATCAAAAAAGTCG
ACGAACCGCCTCATTGTGTTAATCCTTTGACTGTTGCAGAAGGAAACTCA
AAACTAAGACTCGTTCTGGACCTTAGACACGTCAACAGATATATCAAGCC
AAAAAAGTTCAAGTACGAAAACTTAAAACAGGTTTCAGAACTCACGAACA
AAAACGACTTTTTAATTACTTTCGATCTTAAGAGTGGGTATCATCACGTT
CCAATCAATCCAGATTTTCAAACTTTTTTGGGATTCGCCTGGGACATCGA
CGGCAAAAGACAGTATTTCGTATTCAAAGTCTTACCATTTGGGCTCAATA
TAGCATGCCTAGTGTTTACAAAGCTTATGCGACAGCTTGTTAAAAGATGG
CGCTCTATGGGAATCAAATGTGCAATGTATCTCGATGATGGTATAATTGG
GAATAATTCTTATAATTCCCTGATTACAATGAGAGATCTAGTGCTAAACG
ACCTACAATCTGCAGGGCTGACCGTTAACTTTACAAAGTCGAGTCTAGTA
CCCGGGCGTACAAAAACTTGGTTGGGTTTTGAAATAAATACAGTCGATAT
GAACTTTGAAGTGCCAGCATCAAAAATTCAAAAACTTTTGAAATTAATTT
CACAAGCATTAGAAAACGAATTTCTATCAGCAAGAGAAGTTTCCAGAATC
GCAGGCAACCTTATTTCCATGGCAATCGCAATAGGCCCGCTTGTCTATTT
GCTTACAAAACAAATGTACAAATTCATAGCTTCAAGTTTCTCTTGGGATA
AAAGGCGATTAATAAATTTTGACGTTATTCAAGAACTTCAATTTTGGCAA
ACCAATTTAAAAAACGTAAAAGCTTTTAGAATTAAAACCAAACCAGAAAT
TACGAAGATCATCTTTTCGGATGCAAGTGGTACCGGCTATGGAGGTTACG
TGGTAGAAAAGTTAGGAAACATCATAGCAAAAGGAAATTTTTGTAAACAA
GAAATACAAACTAGCTCAACTTTTCGTGAACTTCTTGCAGTTAAATATAT
TTTGATGTCCTTTCCTAAACTTCTCGAAAACGAAATAATTGAGTGGTTCA
CGGACAACGATAATATTTGTAAAATAATCAGCCGCGGTAGTACAAGACAA
CACCTACAAAATCTTGCAATAGAAATTTTCAACCTCTGCTTATCCCACAA
CGTCGAAATTTACCCTACTTGGATACCAAGGGACATGAATAAAACAGCAG
ATTTAATTTCCAAATCTATGGACACAGATAATTGGTCTATCGATAATGAG
ACTTTTAATCACATAATCAAAAACTATGGACAAATTACCATAGATCGATT
TTCCGATAACCAAAACGCTAAGTCAACTGTTTTTAATTCTCGTGAGTATT
GTCCAGGAACATCCGCCGTCAACGCTTTTTCCTGTAATTGGGGAAACAAT
GAGTTCAACTGGCTTTGTCCTCCAATATCCCTCGTGGGTAAGACAATTCA
GCATCTGAAAAATTGTAGAGATTTATTACATCACGATCAACGTTACACGT
GGTGTGTTTTATGTGCCAATGCCTCTGTGCAAACACGTCTTTCGCGTCAA
TGTCTCTGTACAAACGTATTTGAGGAGTTCGTTCTCCATCTTGAAGCCCA
TCGTCTTACAGATGGCAAAGTGCAAAGATTTATTACATCACGATCAACGT
TACACGTGGTGTGTTTTATGTGCCAATGCCTCTGTGCAAACACGTCTTTC
GCGTCAATGTCTCTGTACAAACGTATTTGAGGAGTTCGTTCTCCATCTTG
AAGCCCATCGTCTTACAGATGGCAAAGTGCAAAGAATCAGCTTACGCCAA
ATCCACTTTGAGGAAGTACAAACCTGCTTGGGAAAAATGGGTGTCTTGGG
CTGGTCCATTCGACGAGGTAAACTGTTGTCCTGCCGACCCTTTTTACGTA
GCGGTATATCTAAACGATCTTACGAATTCACTTGCAACCGAAGGAACATT
GACCGCAGCTATTCTAGGAATCAGATGGGGGCACTTAACCTCAGGATTTG
AAATCAGCTTACGCCAAATCCACTTTGAGGAAGTACAAACCTGCTTGGGA
AAAATGGGTGTCTTGGGCTGGTCCATTCGACGAGGTAAACTGTTGTCCTG
CCGACCCTTTTTACGTAGCGGTATATCTAAACGATCTTACGAATTCACTT
GCAACCGAAGGAACATTGACCGCAGCTATTCTAGGAATCAGATGGGGGCA
CTTAACCTCAGGATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000366_pilon | genome | sc0000366_pilon:200982..204647 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2269-2484:217 |
| Aaloc | 2113-2265:504 |
| Aaloc | 385-2109:2538 |
| Aaloc | 1-381:3667 |
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