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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:1524595..1527401+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024414 ID=XLOC_024414|Name=XLOC_024414|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2807bp|location=Sequence derived from alignment at sc0000067_pilon:1524595..1527401+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGGATATTCTCAAATGCAGCTAAAAGAAAAAGACCGTTATTGTGATAT
ACGGTACACAATGAAAACATTGAGCAAATTGTTAATTGAATTTAGGAGCA
TCACTGGTATGCACAATGCCACGAGCTCGAGTCTTGTCCAAGTGAAGAAC
TACGATAACGTACTCAGAGCTGCAAAGAATTTGACAAATTACGAGGGGCC
AAGGAAAATTGGAAAGCCGAATGTGATTCGAAAAATCGGGTTCTCTCTTT
CCAATTTGGCTGTCGTTGTCCGGACCGAAGCTATCAAGGCATGTGACAAT
GATCTCAGAGAGCAGTGTCGATCATTTTTGGAACTATATGAGGTAGATTG
GACAGCCTTTTCAGTGAACGCGCAGGCCGTCTACGAGGATCGAAGTGCAA
ATGCGCCTCAGAATTTACCATTGGAAAGCGATGTCAAGTTGTTCAAACAG
TATTGCGTTGACGAAAtcacaaaaatgttgaaatatgaTTCCTTCTCAAA
AGATGACTACTCGTTGCTTTCCAATCTCACACTTGCAAGGCTGATGACCT
TCAATGCAAGGAGAGGTCGGTATTTCCTTATCCGTTATTCATCAGAATTC
GTATTTAGTCTGGTTACTCTAGGGTCTGAGTGTAATTGAGTATGTAAATG
ATCATTTTCATGAACTTTCAGATGGCGAGAtagttgaaatttctttttgt
tgaaaGGGATTTGTATTGCTTGTAGAGCCTGTTGTGCATATTGTAAATGT
TTGTAATAATATGTGTAGATTTGCCACCAAATGAAAATTCCTTAGCAACA
GCGTGAGGAAACGAAAAATCCGCTATTATGGAAAATCTACCACGCCTAAA
AACCTGACCAAACCTTTTTTCATCTGCATCATGACACCTAAACAGGATTA
GAAGTCAAAGCCCTCCACACTCAATTACCCTCAGAACCTGAAAAACCCAA
TGGGTCCTAGAACTCTCAGCAACAGTtgattgaaaaagactttttaatac
aaatccctgtgaacaaaaagaaatagaaatttcAACTGTCTCGTCAtctg
aaaaatcttgaaaaataagcaagattttgaaatatttgattgattttgaa
aagttcGATTAACTTGGTACTTCAAAATAGCTTGGAACCCTTGATGACTA
CTATCTAGATCTACATTTTTGAGCCAAGTccaaaagagaaattttgaaat
atactaAAAGAAAATGATATGGTTGATAGGGTTTAGATCAATCTCATATA
GCTGTTGGATATCAAAAGTGCAAAAGCTTTGAATTTGGTTATATTGAAAT
GCgtttatatattttcattcaGGCTCAGAGGTTGCAAGGTTAAAATTGGA
TCGTTGGGAGGGGGTTATGGACGACCGTTGGaaaaaaaaGGAGTACATCG
ATCTCATCGATGACGATGTTGAGCGTAAACTGGCCGAGAAATTGAAACTT
TGTTATATCGaggggaaaaagaaaaagaggtcgaagaaaaagaagaacca
CGTTCCGATACTTTTCCCTGAAGAATGTGTGGAGGCAATTCAACGTCTAG
TCTCTTTCAGGGATAAATTTGTAGACGAAGAAAATGAGTATGTTTTTCAC
TCCGGCGAGCTCTACATTAAAGGTTGGAACGCTTTGCAAACCGTGGCAAA
GGAAATTGGCGATCGTTTGACATCGCCAAAGTTACTTACGCCAACTAGGA
CAAGAAAATTCCTAGCCACTATCTTACAACTGATGCAGCTCAACGACGCA
GAGCTGGGCTGGATGACGACTCATATGGGCCATACGAAAGATGTCCACCT
CGGCTTCTACCGTCAGGAGGATTCTACGATTGAGCTGACGAAAGTGGCTA
AGGTACTTAATTTTGATCACTTGTTAACTACCTCGCATTTTATGTCTCta
gttttgccaaaatttcagATGAGGCCAAAACTTGAGATGATTTGATTAAT
GGACTGGTTTTACAAATATTTGGAACGCTTGGTGAAAAAGAACCAAGACA
AGAGCCTTGAAGTCCTATTtattaaacaaaaattgaatgaagaacaaata
tgaatttcttttgatttaaggTGTTATGTGCGGTGGATCAAGGGGTAGAG
TTGAAGAACAAAAAGATTGACGATCTCCTAACGGGTAGGTATTTTTACGT
GTTCAGTATGAATTTAATGCAGGGTCTAAGTGTTGTACTTTAATTGCCGA
AACGTTCAAAATTTACAAGGTCATAAGCACAACTGCATTAACTTCGGAAA
GCTTCTACCGTGCAACAGCTCACAAAAAAGTATATAGAAAACTTTGAAGG
AGTAGGCCGATCACAAGTTGTTTGACCTAGAACTACCCTTAGATGGCCAG
ATTTGGTCGTGAAAACCAATTTCTATATAACTCCAGATCATTTCAGAAAT
CGACTATACTTGTTTAAAAGTCTCCTATGTATTCCTTTGAAAGCTTTAAG
GTGGTTTTTGGTAGGATGTCCCAGCCTAGATATTTCGTATTTCTGTCTGA
CTACAATCGCTTATGAAATATTTAGTATAAGACCAGGTCACACTGAAGTC
CACTTCCCTTTTCCATTGTCCAGCTATTTGTTatacaaagtattttttta
taagcgttGGGTGAatttttcagagcctcatttttgacaaaataattttg
tcactttattaattaattaattaattttgtgagtaattcttttCATAGAA
ATATTGTTCCTTTAATCCATGAATATTTTGAATCTATAGAAAACAATGTT
GAAGAGAGCAGGACTGAAGACGCTGAAGACAACAATATTCAGCAGCAGCG
AGAAGAC Coding sequence (CDS) from alignment at sc0000067_pilon:1524595..1527401+ >XLOC_024414 ID=XLOC_024414|Name=XLOC_024414|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2454bp|location=Sequence derived from alignment at sc0000067_pilon:1524595..1527401+ (Clytia hemisphaerica_ch_hm2_pilon)
TTAGGATATTCTCAAATGCAGCTAAAAGAAAAAGACCGTTATTGTGATAT
ACGGTACACAATGAAAACATTGAGCAAATTGTTAATTGAATTTAGGAGCA
TCACTGGTATGCACAATGCCACGAGCTCGAGTCTTGTCCAAGTGAAGAAC
TACGATAACGTACTCAGAGCTGCAAAGAATTTGACAAATTACGAGGGGCC
AAGGAAAATTGGAAAGCCGAATGTGATTCGAAAAATCGGGTTCTCTCTTT
CCAATTTGGCTGTCGTTGTCCGGACCGAAGCTATCAAGGCATGTGACAAT
GATCTCAGAGAGCAGTGTCGATCATTTTTGGAACTATATGAGGTAGATTG
GACAGCCTTTTCAGTGAACGCGCAGGCCGTCTACGAGGATCGAAGTGCAA
ATGCGCCTCAGAATTTACCATTGGAAAGCGATGTCAAGTTGTTCAAACAG
TATTGCGTTGACGAAAtcacaaaaatgttgaaatatgaTTCCTTCTCAAA
AGATGACTACTCGTTGCTTTCCAATCTCACACTTGCAAGGCTGATGACCT
TCAATGCAAGGAGAGTTAGGATATTCTCAAATGCAGCTAAAAGAAAAAGA
CCGTTATTGTGATATACGGTACACAATGAAAACATTGAGCAAATTGTTAA
TTGAATTTAGGAGCATCACTGGTATGCACAATGCCACGAGCTCGAGTCTT
GTCCAAGTGAAGAACTACGATAACGTACTCAGAGCTGCAAAGAATTTGAC
AAATTACGAGGGGCCAAGGAAAATTGGAAAGCCGAATGTGATTCGAAAAA
TCGGGTTCTCTCTTTCCAATTTGGCTGTCGTTGTCCGGACCGAAGCTATC
AAGGCATGTGACAATGATCTCAGAGAGCAGTGTCGATCATTTTTGGAACT
ATATGAGGTAGATTGGACAGCCTTTTCAGTGAACGCGCAGGCCGTCTACG
AGGATCGAAGTGCAAATGCGCCTCAGAATTTACCATTGGAAAGCGATGTC
AAGTTGTTCAAACAGTATTGCGTTGACGAAAtcacaaaaatgttgaaata
tgaTTCCTTCTCAAAAGATGACTACTCGTTGCTTTCCAATCTCACACTTG
CAAGGCTGATGACCTTCAATGCAAGGAGAGGCTCAGAGGTTGCAAGGTTA
AAATTGGATCGTTGGGAGGGGGTTATGGACGACCGTTGGaaaaaaaaGGA
GTACATCGATCTCATCGATGACGATGTTGAGCGTAAACTGGCCGAGAAAT
TGAAACTTTGTTATATCGaggggaaaaagaaaaagaggtcgaagaaaaag
aagaaccaCGTTCCGATACTTTTCCCTGAAGAATGTGTGGAGGCAATTCA
ACGTCTAGTCTCTTTCAGGGATAAATTTGTAGACGAAGAAAATGAGTATG
TTTTTCACTCCGGCGAGCTCTACATTAAAGGTTGGAACGCTTTGCAAACC
GTGGCAAAGGAAATTGGCGATCGTTTGACATCGCCAAAGTTACTTACGCC
AACTAGGACAAGAAAATTCCTAGCCACTATCTTACAACTGATGCAGCTCA
ACGACGCAGAGCTGGGCTGGATGACGACTCATATGGGCCATACGAAAGAT
GTCCACCTCGGCTTCTACCGTCAGGAGGATTCTACGATTGAGCTGACGAA
AGTGGCTAAGGCTCAGAGGTTGCAAGGTTAAAATTGGATCGTTGGGAGGG
GGTTATGGACGACCGTTGGaaaaaaaaGGAGTACATCGATCTCATCGATG
ACGATGTTGAGCGTAAACTGGCCGAGAAATTGAAACTTTGTTATATCGag
gggaaaaagaaaaagaggtcgaagaaaaagaagaaccaCGTTCCGATACT
TTTCCCTGAAGAATGTGTGGAGGCAATTCAACGTCTAGTCTCTTTCAGGG
ATAAATTTGTAGACGAAGAAAATGAGTATGTTTTTCACTCCGGCGAGCTC
TACATTAAAGGTTGGAACGCTTTGCAAACCGTGGCAAAGGAAATTGGCGA
TCGTTTGACATCGCCAAAGTTACTTACGCCAACTAGGACAAGAAAATTCC
TAGCCACTATCTTACAACTGATGCAGCTCAACGACGCAGAGCTGGGCTGG
ATGACGACTCATATGGGCCATACGAAAGATGTCCACCTCGGCTTCTACCG
TCAGGAGGATTCTACGATTGAGCTGACGAAAGTGGCTAAGgTGTTATGTG
CGGTGGATCAAGGGGTAGAGTTGAAGAACAAAAAGATTGACGATCTCCTA
ACGGgTGTTATGTGCGGTGGATCAAGGGGTAGAGTTGAAGAACAAAAAGA
TTGACGATCTCCTAACGGAAAACAATGTTGAAGAGAGCAGGACTGAAGAC
GCTGAAGACAACAATATTCAGCAGCAGCGAGAAGACAAAACAATGTTGAA
GAGAGCAGGACTGAAGACGCTGAAGACAACAATATTCAGCAGCAGCGAGA
AGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:1524595..1527401 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1162-1227:2742 |
| Aaloc | 1096-1158:2071 |
| Aaloc | 568-1095:1325 |
| Aaloc | 1-564:1 |
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