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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000498_pilon:111836..113364+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023578.3 ID=XLOC_023578.3|Name=XLOC_023578.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1529bp|location=Sequence derived from alignment at sc0000498_pilon:111836..113364+ (Clytia hemisphaerica_ch_hm2_pilon)
TCCGGAAAAACGAGCTGGTTCAGTTGTTTTCAAGGAATCATCCCGTCCAA
ATATATTGCGGGTGTGATGAACGACGGGCGATTCTCAGCAGCTTTGATAA
ACAGTAACACCCAGATTGTGATGATGGATGAGTGGACCCCTGACTCTTTG
TCATGTGAAGATGCCAAACGTGTCCTTCAAGGTGAGTGAATTGATTCgca
ttgttctttttttgtggCCCTGACGAAGGCGATGAAAAATCGCTTTTGGT
TTATCTTTACGCTTGCGCACTTtgaagatatttgaaaaaaaaacttgaaa
gtttgctTTCTTCCTATGTCCGGTTATTCATGAAGATTACCGCTTGATTT
GCACGTAACTCAAAAACctcattttcgtttttatttctCCAGGCGGAATG
AATTTTCTACCCCAGAAACACAAGAGCGGCTTACGTGTCAACTACAATTC
CGGtttttttATAACCACCAACGTCTATCCGGATTTCGGCAACGAAAGAG
ACTGCGATGCGATAAGAAAAAGACTTGAAGTTTTCCAAACGACatcattg
aagcgaaaagatcCATCAGTCTCAGGTAAGACAAAAAGCTGACAGTTTCA
CACGTCATTTAATCTTTGGCACTTTGACTTTTAGGGTGCATTCACTCGTT
TAGAAATGAGGGAGTCTCCGAATGTGAagacaaatatttttcctttttct
gctACTCTATTTGGAACGAGAATCTGAAAAGAGTTTGGTTTTTCCAAATT
CAATcacaaactatttttttatcTCTTCAGCTTGGCTGAGAATGAATTGT
ATGATGGTGTTTCATTTTCTGGCCCACGAATTGCGAAACGAACCCATCTT
TGATACACCCAACGTGGCACCTGCTGCTGGGAATGGAGCAATCTACAACG
ACTTTGATTTTGATCCCATGTCTTTGATGTACGACGATCAAGTCGAGTTA
TTCTCATTCAGCCAACCAGCTGCTCCGGCCGCAGTCCAAGATTCCGGTAA
CGAAGTATCAGGCTTAACTCAAGCATTAGACCATGCCGTCTTGGAAGCTG
ACCGTCACGAAGGCATTCACTACGAAGATTTGCAGTGGGAAACACCTTTA
TTCGACAACGCCAGCGAACACTGTGACGACGTCTATGTCCAAAAAGTCGT
TACTCTTGCTTCAAACAAGGATGGAGCTTGGGACGAGTTGGCCTTGACTG
ACAACGCGAAGAACATGTTCAGGCGACGATTGAGAGCGAAGTGGGAAGGT
GCAGATTCCGTGTACGATGCTTGGTTGATTCGAAAAGGTTGTCAGCGACC
TTGGTTTGACTATCATCTTTTAGACACCCAATATCCAGAGTTTGATGCAG
ACTTAGAGCAAGAACCGCCAACTCAAGTCGTCACAGGCGTCCCCGAAACG
CCTACCAAGCAGAGCACGTCCTGCCAGccaccagaatcaccaaaacCTGA
CGATGCCAACAGTCAGAAATCCATCGATTCTGTTATCACGTCCTATCAGC
CGCCAAAATCACCTAAATCTGACGATGAA Coding sequence (CDS) from alignment at sc0000498_pilon:111836..113364+ >XLOC_023578.3 ID=XLOC_023578.3|Name=XLOC_023578.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2226bp|location=Sequence derived from alignment at sc0000498_pilon:111836..113364+ (Clytia hemisphaerica_ch_hm2_pilon)
TCCGGAAAAACGAGCTGGTTCAGTTGTTTTCAAGGAATCATCCCGTCCAA
ATATATTGCGGGTGTGATGAACGACGGGCGATTCTCAGCAGCTTTGATAA
ACAGTAACACCCAGATTGTGATGATGGATGAGTGGACCCCTGACTCTTTG
TCATGTGAAGATGCCAAACGTGTCCTTCAAGTCCGGAAAAACGAGCTGGT
TCAGTTGTTTTCAAGGAATCATCCCGTCCAAATATATTGCGGGTGTGATG
AACGACGGGCGATTCTCAGCAGCTTTGATAAACAGTAACACCCAGATTGT
GATGATGGATGAGTGGACCCCTGACTCTTTGTCATGTGAAGATGCCAAAC
GTGTCCTTCAAGGCGGAATGAATTTTCTACCCCAGAAACACAAGAGCGGC
TTACGTGTCAACTACAATTCCGGtttttttATAACCACCAACGTCTATCC
GGATTTCGGCAACGAAAGAGACTGCGATGCGATAAGAAAAAGACTTGAAG
TTTTCCAAACGACatcattgaagcgaaaagatcCATCAGTCTCAGGCGGA
ATGAATTTTCTACCCCAGAAACACAAGAGCGGCTTACGTGTCAACTACAA
TTCCGGtttttttATAACCACCAACGTCTATCCGGATTTCGGCAACGAAA
GAGACTGCGATGCGATAAGAAAAAGACTTGAAGTTTTCCAAACGACatca
ttgaagcgaaaagatcCATCAGTCTCAGCTTGGCTGAGAATGAATTGTAT
GATGGTGTTTCATTTTCTGGCCCACGAATTGCGAAACGAACCCATCTTTG
ATACACCCAACGTGGCACCTGCTGCTGGGAATGGAGCAATCTACAACGAC
TTTGATTTTGATCCCATGTCTTTGATGTACGACGATCAAGTCGAGTTATT
CTCATTCAGCCAACCAGCTGCTCCGGCCGCAGTCCAAGATTCCGGTAACG
AAGTATCAGGCTTAACTCAAGCATTAGACCATGCCGTCTTGGAAGCTGAC
CGTCACGAAGGCATTCACTACGAAGATTTGCAGTGGGAAACACCTTTATT
CGACAACGCCAGCGAACACTGTGACGACGTCTATGTCCAAAAAGTCGTTA
CTCTTGCTTCAAACAAGGATGGAGCTTGGGACGAGTTGGCCTTGACTGAC
AACGCGAAGAACATGTTCAGGCGACGATTGAGAGCGAAGTGGGAAGGTGC
AGATTCCGTGTACGATGCTTGGTTGATTCGAAAAGGTTGTCAGCGACCTT
GGTTTGACTATCATCTTTTAGACACCCAATATCCAGAGTTTGATGCAGAC
TTAGAGCAAGAACCGCCAACTCAAGTCGTCACAGGCGTCCCCGAAACGCC
TACCAAGCAGAGCACGTCCTGCCAGccaccagaatcaccaaaacCTGACG
ATGCCAACAGTCAGAAATCCATCGATTCTGTTATCACGTCCTATCAGCCG
CCAAAATCACCTAAATCTGACGATGAACTTGGCTGAGAATGAATTGTATG
ATGGTGTTTCATTTTCTGGCCCACGAATTGCGAAACGAACCCATCTTTGA
TACACCCAACGTGGCACCTGCTGCTGGGAATGGAGCAATCTACAACGACT
TTGATTTTGATCCCATGTCTTTGATGTACGACGATCAAGTCGAGTTATTC
TCATTCAGCCAACCAGCTGCTCCGGCCGCAGTCCAAGATTCCGGTAACGA
AGTATCAGGCTTAACTCAAGCATTAGACCATGCCGTCTTGGAAGCTGACC
GTCACGAAGGCATTCACTACGAAGATTTGCAGTGGGAAACACCTTTATTC
GACAACGCCAGCGAACACTGTGACGACGTCTATGTCCAAAAAGTCGTTAC
TCTTGCTTCAAACAAGGATGGAGCTTGGGACGAGTTGGCCTTGACTGACA
ACGCGAAGAACATGTTCAGGCGACGATTGAGAGCGAAGTGGGAAGGTGCA
GATTCCGTGTACGATGCTTGGTTGATTCGAAAAGGTTGTCAGCGACCTTG
GTTTGACTATCATCTTTTAGACACCCAATATCCAGAGTTTGATGCAGACT
TAGAGCAAGAACCGCCAACTCAAGTCGTCACAGGCGTCCCCGAAACGCCT
ACCAAGCAGAGCACGTCCTGCCAGccaccagaatcaccaaaacCTGACGA
TGCCAACAGTCAGAAATCCATCGATTCTGTTATCACGTCCTATCAGCCGC
CAAAATCACCTAAATCTGACGATGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000498_pilon | genome | sc0000498_pilon:111836..113364 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 367-1113:783 |
| Aaloc | 184-363:395 |
| Aaloc | 1-180:1 |
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