XLOC_023501 (mRNA) -

Overview
NameXLOC_023501
Unique NameXLOC_023501
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000250_pilon:138268..139567+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023501 ID=XLOC_023501|Name=XLOC_023501|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1300bp|location=Sequence derived from alignment at sc0000250_pilon:138268..139567+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAAACAAGAAGAGAAGTCCACccaaaattatccaaaaactgcaggtaaa atatttcttgttttataaaataactgattgactagcctggatatccaggc tgtaaattatttcacagtctagttttagatattttatgttctgatttaca gcctggtctccctagagcgttttgcattctcgtatgagaatgcagtccgc ttgcttgcgctcactttgctaaagccgtaaggaccaatctacacggcgtg gagcattctgaaacaaaaataggatagtcctccagctgctagtgaagata gggctttctgttacacgaaaacatgaaaaagaagaaaacagaggcaagtt cattttccaagaaaacatggttggtcatgataatgcatgcaaactttttt atggactttggtgtaatctttggatgtttttaatagttttagatcttgca agactgctttttattaatttctgttttgctgccctgggttggctaggaaa catgggttttcactttcattctctagggagaccaagctctataatttaag aactttgtatgttgaggtaaattttgttttttcttaaattttgagcttgg atatccaggctactgaTTGACTGGCCTTCGTTTAcctaaattattttaaa ttataCCTTTTGTAAACGCACTTCATTTTTACAACAACCGTTTATGATTT GAAAGGATAAATTTTAGCAGGGATTAATGTTTGTGGATgagcctatccgc gaaattttagGATTTCGAGGATGTCGCCTTTTCGAATATCGCGGGGAttt ttttCGCAGATGAAGcctttttaaatttccctctggacttattttcgcag atgacacccaaatccgcgaattctgtgaaatttaatcctcgcgaaaattt atcccttCAAAAAGTATATTATTTGAATAATTCTGTTATAGTTCCTATCt ttttttCTCAGGCAAAAACCGATCTGGAGATGCTGCAATCGCATAACGTA ACCAAGATCCTATTATGCCAAGACGAAATAGTCATATTATCATGTGGCAA AATCCTAACACGGTTAGGAGTTGATGATATTGGTTTGGCCATAATAACCA TGTTTAGCCATTTTTACCTTTTGGATTTAAATTACCCGGCCTGTTGGTGG GCTGTTTTCACATTTATACAATTTGCCATCTTCGGCGAAAAAGAGGAAGA GAGTGTGCAAGAACAATTTCGGGATCAGTGGAAGAAAGAATGGAAAGAGT TTACCTCGTATCTCTCTTCCAGGGAGGAAGAGGAGGTGCTCGATGATTGA

Coding sequence (CDS) from alignment at sc0000250_pilon:138268..139567+

>XLOC_023501 ID=XLOC_023501|Name=XLOC_023501|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=768bp|location=Sequence derived from alignment at sc0000250_pilon:138268..139567+ (Clytia hemisphaerica_ch_hm2_pilon)
GGAAACAAGAAGAGAAGTCCACccaaaattatccaaaaactgcagGGAAA
CAAGAAGAGAAGTCCACccaaaattatccaaaaactgcagGCAAAAACCG
ATCTGGAGATGCTGCAATCGCATAACGTAACCAAGATCCTATTATGCCAA
GACGAAATAGTCATATTATCATGTGGCAAAATCCTAACACGGTTAGGAGT
TGATGATATTGGTTTGGCCATAATAACCATGTTTAGCCATTTTTACCTTT
TGGATTTAAATTACCCGGCCTGTTGGTGGGCTGTTTTCACATTTATACAA
TTTGCCATCTTCGGCGAAAAAGAGGAAGAGAGTGTGCAAGAACAATTTCG
GGATCAGTGGAAGAAAGAATGGAAAGAGTTTACCTCGTATCTCTCTTCCA
GGGAGGAAGAGGAGGTGCTCGATGATTGAGCAAAAACCGATCTGGAGATG
CTGCAATCGCATAACGTAACCAAGATCCTATTATGCCAAGACGAAATAGT
CATATTATCATGTGGCAAAATCCTAACACGGTTAGGAGTTGATGATATTG
GTTTGGCCATAATAACCATGTTTAGCCATTTTTACCTTTTGGATTTAAAT
TACCCGGCCTGTTGGTGGGCTGTTTTCACATTTATACAATTTGCCATCTT
CGGCGAAAAAGAGGAAGAGAGTGTGCAAGAACAATTTCGGGATCAGTGGA
AGAAAGAATGGAAAGAGTTTACCTCGTATCTCTCTTCCAGGGAGGAAGAG
GAGGTGCTCGATGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_023501XLOC_023501-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000250_pilongenomesc0000250_pilon:138268..139567 +
Properties
Property NameValue
Aaloc46-384:962
Aaloc1-45:1