|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:665318..668922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023354 ID=XLOC_023354|Name=XLOC_023354|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3605bp|location=Sequence derived from alignment at sc0000058_pilon:665318..668922+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCGTTCAAGACCAAGTTGGGTTGGTGGTAGTAAACCCAAGGTCGCTAC
ACCTGAGGTTGTTGCAAAGATCGAACAATACAAACGAGAGAACCCTACCA
TCTTTGCTTGGGAAATacgtgaaaaattaatgaaatcaaACGTATGTAAA
ACAACCAATTGTCCAAGTGTCAGTTCAATCAATCGTATTTTACGAAACCG
TGCGGCTGAGCGTGTCGCCCAGAAAGCCTTTTTGGAAAGAGAACGCGAGT
ATTCATTGCTGCGTTCGAGCACTGGCACTACTCACGCGCCATTATATCCT
TTGGCGGAAAGTGACGTAAGGATTATGTCATCTTCGGCTGCTGCCTATCA
CCGGTTACGCTATGGCTCCGCACAGTGTGCTCACAGATTCTGTTCGGGTG
GTGCACCGTCTTCTATTATACCGCCCTCCTTTGGAATGAGAAGATTGGAA
AGTCTTGAATCACTTTATAGAAAAGAGCATTATAGAAACAGCTGGAAAgg
tataaacttttttttgctttttactgcctcatttctttcctcacttttct
agtttttAAGACTATATTATCTATTGGTTTAGAGTGAAATTTTTAGGCCA
ATTTCTCTCTAAATAAAGCCCATGAAGCATTGAAGAAAACAACTTGTTCC
AATACAACAGAGAAACCTCTTATTAAAGACACAAATTTAATCATATTTTT
CTAACTCTTCTATGTGCTCTATTTAAGTGGAGCCTCTGTATAATAGACCT
TGTTTTCAGTAATGCAACTTACCCCATCTGTAGTCGGAAATTCGTCCAAC
TGAAGGTTTATTTGTCCTCTAGTAATCCTTGAATGAAGAAAATTACTTGA
AAATTTCCCCTGATTTTCAAGTTTCCATGTATATTCACTAAAGCTGGCAA
CAACACTGTCATTtaaatattgttaaaaaattattttattataatttcTA
ATCTCTCTAGATCACTTTATCAGTCGTAAGCGAATTGCTTCAGCACTAGC
ACCTTACCACACACGAACAAGCCAGTTCGAATATCTATCACCTTCATATC
AAAGTGAAAACACATTAAAATATCAATGGAAAAATCTATCACCAGCCACC
ATAAATATTGATCAAAGATACACTGATGAAGCTTTTGTTGAAGACGGTCA
ACTTTCAAGAACGTATCTATCACCAAAAGAACGTAAAATGTCACACGAAG
AGCAACGGCAGCTTGATAGTACTGGTAATAGTGAAGAGCGTGATACGTAC
ACTGATTACCCATCCGTAGATAAAGATGAAATAAGACCACGGATACTGAG
CAGTGAACATGACGTGACGCTATCTCCACCGGACAGATATCGAAACTGTG
ACGACAACAACAACGAGAATCTTCCGGATACCGAACAAACGACGTTAGAG
AAACAATCAAATAAATCATTACACGGTGAAATTGAAGTTTATTACAGTGA
TAATTCTTCTGTAAACTCAGATTGTCTAAGTGATTCACCGATGGAAAAAT
TATCACGCTCTGAAGCACGAAAGCTGCGAAGAAGTCGTACGACATTCACG
ACGTCACAATTGAAGCTATTGGAACGCGAATTCCAGAATTTTCAATATCC
TGACGTAACAACAAGAGAAGAGTTGGCAACAAAAATCAATATGTCGGAAG
CAAGAGTACAGGTCAGTGTGgataactttttttctggatTCTCAATTGTC
CATCTAGATATAGCTAGACTTTAAATAACGAATAATTCTATTTACACTAA
attttacacaaaatttgattttttcaacaacaacttatttttgagtcaaa
caacacaaGAAAGCCTGTGCGGCGTAAAGGCCCAGCAGTGTTGATAGCAT
CAACATATTTTCCCGTTGCAGAGCCGCCATACAGCTTAATTTACAGAAGT
TAATTGTTTCGATTTAATAGAGCAACTCGAGTTGGGCGAGCAATGAAGAA
ttaattacttttatttttatgtgaTAACAAGAGTATCTCaccatcaaaat
aagaaatatttgagcATATCACTGGGAGGTTTTAATTATATGTGACTTTT
CCTTACGCATGTGCACAATAACAAGTTGcagataattcaatttttagccT
GGACTCGTACATTGATAATTACGCGCATAGGCTTGgacaaagtcaaatct
tttcgAACTATAGTTGTATTTTaggaaaaaaaaggaaaaacaaccACAGT
TTCTCATTTCCCACACCATTGATGTTCTCCAAAACCACAAAACCATCAAA
CGGCATCAAAACAAGTCCTCAGTCAGAAAAACATCCTCCTCTGCACcgaa
aaaaaactaaagttaATTTTCAACGCGGGTAAAAAATGGcatgagaaaat
tgaaattcttaGTTAGCGCACATCTCTACTTAAACCACAAAACTATCTGT
TTCGACTTCAACTAACAAGTAAACAACCTTCATTTAGAATCTTTTTCTTA
GTTTGAACATAAACAATAGGAAGtctaaacaagacgacttgaagtcgaaa
atttcgcctaaagtttaaactgcatgggaaaaaacaagaagtagagatgg
aAGTTAATCTGAAGTCttctttacatcgagccttgatgaaacaaattTAT
ATGaccaacgaggctcaaaatcgctaaaaagataagatcaatttacgaac
aatggttgtttaattcttaagaactaataactgaAGGGCATACTACCATC
TATAAAGAATTATTAATTTGACTCTTATAGAGtatatgcttacaagaaaa
atacCTTATCATGGAAAACATCGTCggagaaaagtgacgaaattttggcc
aagtgacgaatatttttcttattatttttcttaaagcTTATTTGctgcaa
aatcttgaaaatcttgaaaatcttgctttttgaccaattttccatcccaa
tttaaaacagttcaattctttgtggacagtttgaaaaaacttcgaaacaa
aaaagttaattacttagcactttttataaaagaaggtaatgcaacggctt
tttaaccctttaagtgccaactTCGTATATATCAGACGTGGGCTGTGTAG
GAGGGCGAAgtcctcctgtaatgcccagtttgagtaaGAAATCGTCATTA
TTGGTCTAATTCGTAGGAATCGGATTGGGCTTCGTGGCCAAGCAAAATCA
TGGTAATTAcgattcaaaagtgagtcttttcagcgagattttaagctaaa
aagtcaataaagtgcaaaaatttgacaaaaatccacttttttaagatttt
gaccgttttttgatcACATCAGGAGGTGCTTAATAGATATTCAAGAATAT
CGAGGTTTTATGGCTTAATAGTTATGAACATACCTTAATCTATAATACAA
TCAACGGATTTTAATTTTCCTGTTTCTTTATTGATGAAATAGGTTTGGTT
TTCAAATCGCCGTGCAAAATGGCGACGTCAACAGAACGGTGAAGATTATG
ACCCAATGGAGGAGTATACATCATATCACTGCGAAGACCATGTCTCTCCT
TCGCAGATGCAAATTAATGAACGACGAAGAGACTCAATTGAAATCTTAGA
GGAGAGAGAATACGAAGTGTTTCCGTTATCGGATGAAGATGACAAGGCGA
ACTAA Coding sequence (CDS) from alignment at sc0000058_pilon:665318..668922+ >XLOC_023354 ID=XLOC_023354|Name=XLOC_023354|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2826bp|location=Sequence derived from alignment at sc0000058_pilon:665318..668922+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCGTTCAAGACCAAGTTGGGTTGGTGGTAGTAAACCCAAGGTCGCTAC
ACCTGAGGTTGTTGCAAAGATCGAACAATACAAACGAGAGAACCCTACCA
TCTTTGCTTGGGAAATacgtgaaaaattaatgaaatcaaACGTATGTAAA
ACAACCAATTGTCCAAGTGTCAGTTCAATCAATCGTATTTTACGAAACCG
TGCGGCTGAGCGTGTCGCCCAGAAAGCCTTTTTGGAAAGAGAACGCGAGT
ATTCATTGCTGCGTTCGAGCACTGGCACTACTCACGCGCCATTATATCCT
TTGGCGGAAAGTGACGTAAGGATTATGTCATCTTCGGCTGCTGCCTATCA
CCGGTTACGCTATGGCTCCGCACAGTGTGCTCACAGATTCTGTTCGGGTG
GTGCACCGTCTTCTATTATACCGCCCTCCTTTGGAATGAGAAGATTGGAA
AGTCTTGAATCACTTTATAGAAAAGAGCATTATAGAAACAGCTGGAAAgA
ACCGTTCAAGACCAAGTTGGGTTGGTGGTAGTAAACCCAAGGTCGCTACA
CCTGAGGTTGTTGCAAAGATCGAACAATACAAACGAGAGAACCCTACCAT
CTTTGCTTGGGAAATacgtgaaaaattaatgaaatcaaACGTATGTAAAA
CAACCAATTGTCCAAGTGTCAGTTCAATCAATCGTATTTTACGAAACCGT
GCGGCTGAGCGTGTCGCCCAGAAAGCCTTTTTGGAAAGAGAACGCGAGTA
TTCATTGCTGCGTTCGAGCACTGGCACTACTCACGCGCCATTATATCCTT
TGGCGGAAAGTGACGTAAGGATTATGTCATCTTCGGCTGCTGCCTATCAC
CGGTTACGCTATGGCTCCGCACAGTGTGCTCACAGATTCTGTTCGGGTGG
TGCACCGTCTTCTATTATACCGCCCTCCTTTGGAATGAGAAGATTGGAAA
GTCTTGAATCACTTTATAGAAAAGAGCATTATAGAAACAGCTGGAAAgAT
CACTTTATCAGTCGTAAGCGAATTGCTTCAGCACTAGCACCTTACCACAC
ACGAACAAGCCAGTTCGAATATCTATCACCTTCATATCAAAGTGAAAACA
CATTAAAATATCAATGGAAAAATCTATCACCAGCCACCATAAATATTGAT
CAAAGATACACTGATGAAGCTTTTGTTGAAGACGGTCAACTTTCAAGAAC
GTATCTATCACCAAAAGAACGTAAAATGTCACACGAAGAGCAACGGCAGC
TTGATAGTACTGGTAATAGTGAAGAGCGTGATACGTACACTGATTACCCA
TCCGTAGATAAAGATGAAATAAGACCACGGATACTGAGCAGTGAACATGA
CGTGACGCTATCTCCACCGGACAGATATCGAAACTGTGACGACAACAACA
ACGAGAATCTTCCGGATACCGAACAAACGACGTTAGAGAAACAATCAAAT
AAATCATTACACGGTGAAATTGAAGTTTATTACAGTGATAATTCTTCTGT
AAACTCAGATTGTCTAAGTGATTCACCGATGGAAAAATTATCACGCTCTG
AAGCACGAAAGCTGCGAAGAAGTCGTACGACATTCACGACGTCACAATTG
AAGCTATTGGAACGCGAATTCCAGAATTTTCAATATCCTGACGTAACAAC
AAGAGAAGAGTTGGCAACAAAAATCAATATGTCGGAAGCAAGAGTACAGA
TCACTTTATCAGTCGTAAGCGAATTGCTTCAGCACTAGCACCTTACCACA
CACGAACAAGCCAGTTCGAATATCTATCACCTTCATATCAAAGTGAAAAC
ACATTAAAATATCAATGGAAAAATCTATCACCAGCCACCATAAATATTGA
TCAAAGATACACTGATGAAGCTTTTGTTGAAGACGGTCAACTTTCAAGAA
CGTATCTATCACCAAAAGAACGTAAAATGTCACACGAAGAGCAACGGCAG
CTTGATAGTACTGGTAATAGTGAAGAGCGTGATACGTACACTGATTACCC
ATCCGTAGATAAAGATGAAATAAGACCACGGATACTGAGCAGTGAACATG
ACGTGACGCTATCTCCACCGGACAGATATCGAAACTGTGACGACAACAAC
AACGAGAATCTTCCGGATACCGAACAAACGACGTTAGAGAAACAATCAAA
TAAATCATTACACGGTGAAATTGAAGTTTATTACAGTGATAATTCTTCTG
TAAACTCAGATTGTCTAAGTGATTCACCGATGGAAAAATTATCACGCTCT
GAAGCACGAAAGCTGCGAAGAAGTCGTACGACATTCACGACGTCACAATT
GAAGCTATTGGAACGCGAATTCCAGAATTTTCAATATCCTGACGTAACAA
CAAGAGAAGAGTTGGCAACAAAAATCAATATGTCGGAAGCAAGAGTACAG
GTTTGGTTTTCAAATCGCCGTGCAAAATGGCGACGTCAACAGAACGGTGA
AGATTATGACCCAATGGAGGAGTATACATCATATCACTGCGAAGACCATG
TCTCTCCTTCGCAGATGCAAATTAATGAACGACGAAGAGACTCAATTGAA
ATCTTAGAGGAGAGAGAATACGAAGTGTTTCCGTTATCGGATGAAGATGA
CAAGGCGAACTAAGTTTGGTTTTCAAATCGCCGTGCAAAATGGCGACGTC
AACAGAACGGTGAAGATTATGACCCAATGGAGGAGTATACATCATATCAC
TGCGAAGACCATGTCTCTCCTTCGCAGATGCAAATTAATGAACGACGAAG
AGACTCAATTGAAATCTTAGAGGAGAGAGAATACGAAGTGTTTCCGTTAT
CGGATGAAGATGACAAGGCGAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:665318..668922 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1681-1893:3393 |
| Aaloc | 982-1680:963 |
| Aaloc | 481-978:1 |
|
