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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000493_pilon:81023..83598+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023350 ID=XLOC_023350|Name=XLOC_023350|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2576bp|location=Sequence derived from alignment at sc0000493_pilon:81023..83598+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTCAGGCGTACGGTCGTGATTTGATGGAAGCGAGAGATTGGTGTCGTAA
ATACCAGAACACGAAGAATGATAAAGATTTGACGCAAGCCTGGGATTTGT
ATTATCACGTCTTCAGAAGAATCTCTAAACAACTCCCTCAGGTATACTCT
TTAAACCTTAAGAATGAAATCTGATTGATAGCAGTAAAATCATGTCTAAT
TTTCTTGTGTTTTGGGTGTACCACGATATTTGTTCCACGAAAAGCAATTT
TTCTTATGCTAGTACATAATCTGAAAACTCTCTAGGAGAAAGGGGAGAAC
TTTGGCAAAAAGTCTCCTgcaaaaattttagtttcacAAATAACATCACT
GAAATCACTTAGAATGAGTTTCCTTTAGTTTACTTTAAATCAATTCTTAT
GTTTCAATTTACAGCTAACATCTATCGAATTGCAATATGCTTCACCGAAA
CTGTTGGAATGTAAAGACCTGGAACTAGCTGTCCCTGGTACTTACGAACC
TGGCAAACccatcacaaaaatcaaaactatcAGTACTACTCTCAATGTCA
TCACTTCAAAACAAAGACCAAGAAAGTTGAGCATTACTGGTAAGAAAATA
GTTCTTAAGTCTGTTTTTGTATCACGCCGTTTCGAGCATGTCAAGATCTC
TCACTTATCAAAACCACTGAACTTGGACCCTGGGCAAAGTTTCTCGATCC
TGGCCTAGCAAAATCTTTGGTcggagttatttaaaaatggTACCCTAAAG
ACTGTGAGTTAAACGATTTCAACATTTAATCCAACATAGAAATTGAAATG
TTGGtcaaatgttggatgaattTTGGAATGATATTGGATCTCCTTAAAAT
CGTTTACCCACAGTGTCCAACATCGTTTTCATCCAACATGGGGGttcatt
cattcgttttttaattcattgttttcaaattcattcttttcaaattaata
ATGGCGTCTGCAGAGGATTGTTATAACCAGTGCTGTCATGCCGACATCTG
CCAGTCTGACAatttgacccttacagtgcagagaaaatctaagcaaaaat
cgacccttacggtgcaaCATTTTATCCAACATACCAATTTCTCTCTGTTA
GAGAAGCTATTAGATCGAATATTCCCTcccccccccGGGAGGGTTTATCC
GAACAAAAATATTCGATCTAATAGCTTCTCTATTCAACACAAGAATCGag
agaaaaaacaaaggaatagATGCTGGACAAAATGTATGATGACGATCAAA
CTCCCATCCAACACTTATTTTCTTCTGCCAACATAATTTGTTATTCTTTT
CCGATTTTTGCATTCGAGTAAACGTGTCCAACATTCCGTTCAACAGAGAG
AAATTGGTATGTTGGATaaaatgttggaatcgtttacccCGGCCTTTATG
GTAGCAATTGTCAATGTGGGTGAAATAGTTTTTAAACGGGGAAACTACAA
TAATGGTATTTGACTCGTGTTGCCAAATCTCCAACTTTAGGTatgaacca
ttgagtttaaagcccgaagggctagagttcaatctctaacctttctcagg
caagaaaaagtgaagccttaaaaaatgcgccgcatttttgacgacagatt
gaatctagcaattcctttgtttacgattgatatttttttcgaaatttagc
ggtaaattttagtttcaatctttcatttgtgtaaaaaccaggcgagccgc
tcaaggccgcgcaactttggtaggatttgttggcttcaaatcctaccatg
gatattgacttctagcccttcgggcttatacttcattggtatGAACTATC
CTATATAGAAAGTACATATGATGAAGACAACTCCGTCAATAAAACTCGTA
TGCCCCGAAACTGTGATTTCTATAGAATGATAACCTTTGTACCCATATTT
TTTACCATTATAGGAAGCAACGGTGCAGAATTCATGTTCTTACTGAAAGG
CCACGAAGATTTGCGACAAGACGAACGTGTCATGCAACTCTTTGGTCTTG
TCAATACACTGTTAGCCAACGACTCGGTTACTTTCAAACGACATTTAAGG
TAAGAACGtcaactctctataattcgattctttattattttaatcttttt
ttaattcgaactaaaagatTGGTTCTCTCAAACCCGAAAGgttatgtaaa
aataattttcgtcatccgaatatttctataattcaaataaaacttttggt
cacttgaagatcgaattatagagagtcaaGACAAACAACAATTCTCATAG
ATTCACTTGTTGTGACCTTGTTGTCCATTAGTTTGTTGGGGCTCAAATCT
CCTATTTTCAAACCATACTAATTGACAATTTTTAGTATTCAACGTTACCC
AGTTATTCCGTTATCAACAAACTCGGGATTAATCGGATGGGTACCGCATT
CCGATACTTTGCACACGCTCATTCGAGACTATcgtgaaaagaaaaagatt
atgCTGAACATCGAACATCGAATCATGTTAAAGATGACGCCCGACTATGA
ACATTTGACGTTGATTCAAAAAGTGGAGGTTTTCGAACATGCTTTGAACA
CAACACAGGGTGATGATTTAGCGAAA Coding sequence (CDS) from alignment at sc0000493_pilon:81023..83598+ >XLOC_023350 ID=XLOC_023350|Name=XLOC_023350|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1386bp|location=Sequence derived from alignment at sc0000493_pilon:81023..83598+ (Clytia hemisphaerica_ch_hm2_pilon)
CTTCAGGCGTACGGTCGTGATTTGATGGAAGCGAGAGATTGGTGTCGTAA
ATACCAGAACACGAAGAATGATAAAGATTTGACGCAAGCCTGGGATTTGT
ATTATCACGTCTTCAGAAGAATCTCTAAACAACTCCCTCAGCTTCAGGCG
TACGGTCGTGATTTGATGGAAGCGAGAGATTGGTGTCGTAAATACCAGAA
CACGAAGAATGATAAAGATTTGACGCAAGCCTGGGATTTGTATTATCACG
TCTTCAGAAGAATCTCTAAACAACTCCCTCAGCTAACATCTATCGAATTG
CAATATGCTTCACCGAAACTGTTGGAATGTAAAGACCTGGAACTAGCTGT
CCCTGGTACTTACGAACCTGGCAAACccatcacaaaaatcaaaactatcA
GTACTACTCTCAATGTCATCACTTCAAAACAAAGACCAAGAAAGTTGAGC
ATTACTGCTAACATCTATCGAATTGCAATATGCTTCACCGAAACTGTTGG
AATGTAAAGACCTGGAACTAGCTGTCCCTGGTACTTACGAACCTGGCAAA
CccatcacaaaaatcaaaactatcAGTACTACTCTCAATGTCATCACTTC
AAAACAAAGACCAAGAAAGTTGAGCATTACTGGAAGCAACGGTGCAGAAT
TCATGTTCTTACTGAAAGGCCACGAAGATTTGCGACAAGACGAACGTGTC
ATGCAACTCTTTGGTCTTGTCAATACACTGTTAGCCAACGACTCGGTTAC
TTTCAAACGACATTTAAGGAAGCAACGGTGCAGAATTCATGTTCTTACTG
AAAGGCCACGAAGATTTGCGACAAGACGAACGTGTCATGCAACTCTTTGG
TCTTGTCAATACACTGTTAGCCAACGACTCGGTTACTTTCAAACGACATT
TAAGTATTCAACGTTACCCAGTTATTCCGTTATCAACAAACTCGGGATTA
ATCGGATGGGTACCGCATTCCGATACTTTGCACACGCTCATTCGAGACTA
TcgtgaaaagaaaaagattatgCTGAACATCGAACATCGAATCATGTTAA
AGATGACGCCCGACTATGAACATTTGACGTTGATTCAAAAAGTGGAGGTT
TTCGAACATGCTTTGAACACAACACAGGGTGATGATTTAGCGAAATATTC
AACGTTACCCAGTTATTCCGTTATCAACAAACTCGGGATTAATCGGATGG
GTACCGCATTCCGATACTTTGCACACGCTCATTCGAGACTATcgtgaaaa
gaaaaagattatgCTGAACATCGAACATCGAATCATGTTAAAGATGACGC
CCGACTATGAACATTTGACGTTGATTCAAAAAGTGGAGGTTTTCGAACAT
GCTTTGAACACAACACAGGGTGATGATTTAGCGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000493_pilon | genome | sc0000493_pilon:81023..83598 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 454-693:2337 |
| Aaloc | 319-450:1916 |
| Aaloc | 142-315:415 |
| Aaloc | 1-141:1 |
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