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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1653693..1656934+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023293 ID=XLOC_023293|Name=XLOC_023293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3242bp|location=Sequence derived from alignment at sc0000049_pilon:1653693..1656934+ (Clytia hemisphaerica_ch_hm2_pilon)
ataacgttatattttatattttcaaactttacaGAGGTGAACCCCTACGA
TTACTGTTTGGGTTCACTGGATTGCCGTATCGAACATATGTCTGCTGAAA
GCGATGAAGCTAAACTTATCTCAAAATACATATACAGAGAAGGAAAAAGC
TGTGACGCAAAaggtattattttttcaaaattttattcatcaGTAATTTA
ATTACTCTACTCAATGGTCGCCTCAGCTAGTCTAGATTCAATTATATTTA
AATTGACCCACCAACGATTTTGAGTTCTTCAAAATCTTCAGTTTCCAGCT
CATAATCCTCTGGCTACTGGTTCTCTATGTCCAATGTGCTATGAGCCAtt
gttgagttgtagtttatgttgttataaaaataacagttgtatatgttgtt
gtaaaaataaCAGTTGTGAGCAATGATTTGATGATAATAGTTTGAATTTC
AGAGATACTTCGAGTCAGTCAGTCCTTGTGTTTTTGTACTGAAAccgcca
tttttaaaaatcggGACATTGCTAGCCTCGTTTTCAAGTATTACgcaata
atttatgaaaagccgTATTATTCAGCTGACAAACGATGTCATTCAACTCT
CATGTGATCTTGAGGAAGACCCTGGATGTTAGACGTTAGGTAAACGATAT
TTGATACTTGATGGAGCGGTAGAATGATTTTTAGCTTAATCTTGATTCTG
ATGTAATGTTGTACTAACtgctttttgttttggtttgttttaaaTTGCAT
CTTGGAGAAAGAGAAGATGAGACTGAAGAGGAGGAAGATGATAGGAATGA
AAATAAGGAGAGTGATATATTTGACAATCAAGATGATGATTCCACAGATG
TGGAGAATTACGAAGGCATATTCTCATTTCCTTGTTATTGTTTTCACTGG
TGCAATTTACTAAATTTAGCGTTTCAGTCGTAAAATTGTAATATTAACTT
ATTAGCAGTCTCATTAAATACACAATGGAGTATGAAAAACTATAGAATAA
CACGTTAGTCGTGAGAAAAGCCCCacatgttttcttttataagaacaagc
tatatataagaacagaagGCTTCGATgtccaaaatgctaagaacaagtta
agaacattttaaggctttgcggattCGAAAATACCCGATTCTGAAAACGG
Gtcgaaatggccaaaaaatgaagaaagtaagaaacatgttaaaaacattt
ttaggcttaaaatccaaaaagttaagaacgttcttaaaataagaaaaact
gTCATTTTACCATTCTTGACACTGGATTAATTCATAACTCAAGAACGCtt
aataaatttcaagaaaagatCTTGGTTATCTTTTTCAGGTGAggcacaaa
attttgaaattaatatgGTTTTAAACTTGCTGTCTCTTCACAAGGAAAAT
AAGTAATAATTTCAATCTTGCGCGCACGAAAATTTACCATCTCTTTCTCT
CGTGTTTCTTAGTGACCGGAATGTTCCGCGTGGCATGTCAAGAAGACACT
AAAAATTACCGAACAGATCTCAAGAACAAGCGTTTGCTATTTCACGGAAC
TAAAATGGCGCATATCATGAGTATTTTAAAGAATGGTCTGCAAATTGCAC
CCGAAGGATCGATCCGAAGCGGCAGCGCTTATGGAAAGGTAACAAACACG
ATACAGATTGTCCCAGCTGGCACACAAGGTTGTTTCAACGTTTCTTTAAC
GTTCACAACGACCATTAAACGTTAGATGAACGTTGAAACAACGTTGTGTG
CCAGCTGGGACGTAGTATGTTTTGGACTTTTAGTGACTGTTTTGTTTAAA
CTTTGGTTCAATAACCTGAAATGTTATTAAAGAATTGGAGCAATGTGCTG
TTCCATTAAAAATACATCAAGGAGGGGGGGGGTAAACAAACCTTTTCAAA
TAAAAAATAATTCGTGGAAATGTGTGGCAAAATGGCAACATTTATAAAGA
AACTCTTGGAAAAATTAACTTCATACTTTGAGGTGACGGTGGACGAACTA
AAACCAGTCTTTTACCCTCTGGAGATTTTTGAATTGGTTTTAACCCCTAG
AAAAATTTtaaaacatTTCTTTgacccctggaaattcttctctcGCTGTT
TGGATACAAAATGGGATGGCAAGAAACATGGGAAATCCAATCCTTTATTT
CATCGATGCAATACACCTAACAACCCTTACAATGCGGTCAGTGTTTGAGA
GGATTGGTAATGAATGTGCAAAGGTTTGTGGGACGGCAAGTCTACTGATG
ATATGATCTCTCTATTTTCCAGGGAATTTATTTCAGTTATGATTTTGAGA
CATCGAATAATTATGCACAAGGCAAACAGAACAAGTACATGTTTTTATGT
GAGGTAAGAATCTTCAAACAGTataaggccaaaatattaagaacaagtca
atgaaatttaaagtccctgccaacaagaaactctcataaataaCGCTTcc
ccttaaagatcgaattagggagcgtcaactgtaattatttttttgattat
cGGACTTTTTGATAGAGTGGTTTCAAGATACCTTCTCCAAAAAAGAGTCT
CCGCGACCTTTTCCCTTGGATCTTAAGCGACACAAGAAAGCCTAAGCAGC
GTAAAGGCCCAGCAGTGTTGGCagtgtcaatatatttttcgtCGCAGAGT
ATCGCCATACAACTCAATTTACAggagtgaaatttttcaatgcaTAGACT
CGAGTCGGGAGAGAAATAAAGATTTAGTTGCATTGAtttttttAGATAAC
TCTTACTAATCAAGAAAGGAAGATTTGAACATATAACTTAAGCATGCGCA
CAGTAGAAAATTAGATAATTCGTCAATTGATAATTGCGCgcataggcccc
gacaaagtcaaatcttttcgACCAGTTGCGTTTTAAAGGCCCATCCCGCT
GCGCGCTGGGCCAATTACGGTCTATCATTCTTCGGCCTCTTAAGGAATGT
TCTTATTCACTGTACTATGCAGGTATCACTCGGCAAATCGTACGACAAGG
GGAGAAATCACAGAGGAGAATCATatccaatgaaaaaaacacaaagTACT
TGGGTACAGACACAAGAAATTCCTAACCCCGACAAACATGTGACCATGCC
ATACGGAGCTAGTCTATTGTTAGGAGAGAATATTCAAAACCCTGACATAA
TCAATCGATATCATTATTCCTACAATCAACCAGAAATCATTGTGTACGAT
GCGAAACAAGTTAAGATTAGATACATCATCCAATACAAATAA Coding sequence (CDS) from alignment at sc0000049_pilon:1653693..1656934+ >XLOC_023293 ID=XLOC_023293|Name=XLOC_023293|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1380bp|location=Sequence derived from alignment at sc0000049_pilon:1653693..1656934+ (Clytia hemisphaerica_ch_hm2_pilon)
ataacgttatattttatattttcaaactttacaGAGGTGAACCCCTACGA
TTACTGTTTGGGTTCACTGGATTGCCGTATCGAACATATGTCTGCTGAAA
GCGATGAAGCTAAACTTATCTCAAAATACATATACAGAGAAGGAAAAAGC
TGTGACGCAAAagataacgttatattttatattttcaaactttacaGAGG
TGAACCCCTACGATTACTGTTTGGGTTCACTGGATTGCCGTATCGAACAT
ATGTCTGCTGAAAGCGATGAAGCTAAACTTATCTCAAAATACATATACAG
AGAAGGAAAAAGCTGTGACGCAAAagTGACCGGAATGTTCCGCGTGGCAT
GTCAAGAAGACACTAAAAATTACCGAACAGATCTCAAGAACAAGCGTTTG
CTATTTCACGGAACTAAAATGGCGCATATCATGAGTATTTTAAAGAATGG
TCTGCAAATTGCACCCGAAGGATCGATCCGAAGCGGCAGCGCTTATGGAA
AGTGACCGGAATGTTCCGCGTGGCATGTCAAGAAGACACTAAAAATTACC
GAACAGATCTCAAGAACAAGCGTTTGCTATTTCACGGAACTAAAATGGCG
CATATCATGAGTATTTTAAAGAATGGTCTGCAAATTGCACCCGAAGGATC
GATCCGAAGCGGCAGCGCTTATGGAAAGGGAATTTATTTCAGTTATGATT
TTGAGACATCGAATAATTATGCACAAGGCAAACAGAACAAGTACATGTTT
TTATGTGAGGGAATTTATTTCAGTTATGATTTTGAGACATCGAATAATTA
TGCACAAGGCAAACAGAACAAGTACATGTTTTTATGTGAGGTATCACTCG
GCAAATCGTACGACAAGGGGAGAAATCACAGAGGAGAATCATatccaatg
aaaaaaacacaaagTACTTGGGTACAGACACAAGAAATTCCTAACCCCGA
CAAACATGTGACCATGCCATACGGAGCTAGTCTATTGTTAGGAGAGAATA
TTCAAAACCCTGACATAATCAATCGATATCATTATTCCTACAATCAACCA
GAAATCATTGTGTACGATGCGAAACAAGTTAAGATTAGATACATCATCCA
ATACAAATAAGTATCACTCGGCAAATCGTACGACAAGGGGAGAAATCACA
GAGGAGAATCATatccaatgaaaaaaacacaaagTACTTGGGTACAGACA
CAAGAAATTCCTAACCCCGACAAACATGTGACCATGCCATACGGAGCTAG
TCTATTGTTAGGAGAGAATATTCAAAACCCTGACATAATCAATCGATATC
ATTATTCCTACAATCAACCAGAAATCATTGTGTACGATGCGAAACAAGTT
AAGATTAGATACATCATCCAATACAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1653693..1656934 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 421-690:2973 |
| Aaloc | 340-420:2273 |
| Aaloc | 166-339:1465 |
| Aaloc | 1-162:1 |
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