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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000485_pilon:49541..53197- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023253 ID=XLOC_023253|Name=XLOC_023253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3657bp|location=Sequence derived from alignment at sc0000485_pilon:49541..53197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGGTGTCAATAGTATGATATTGGCATCATTGCTGTTTTTCACCTT
GTCTACGGCAATAGAAGGGGGATGTAGTAAAGGAACATATGAAATAGAAG
GAAGATGTGAACGTTGTGACGGTGTCAGGGAATACCAAGATGAAATAGGG
GCATCTTCATGCAAGAAATGTTCTTTGGGATCCGTATCAAAAACCGATTA
TTATGGTTACAACACTAGTTGCGCACAGTGTGATACAGGGACATATGAAA
TAGAAGGAAAATGTGAACATTGTAATGGTGTCATGGAATACCAAGACGAG
AAAGGAAAAACTTCATGCAAGAAATGTTCTTTGGGATCCGTATCAAAAAC
CTATTATGGTTACAACACTAGTTGCGCACAGTGTGATACAGGGACATATG
AAATAGAAGGAAAATGTGAACATTGTAATGGTGTCAGGGAATACCAAGAC
GAGAAAGGAAAAACTTCATGCAAGAAATGTCCTTTGGGATCCGTATCAAA
AACCTATTATGGTTACAACACTAGTTGCGCACAGTGCCGTGCAGGGACAT
ATGAAATAGAAGGAAAATGTAAACATTGTAATGGTGTAATGGAATACCAA
AACGAAGAAGGAAAATCTTCATGCAAGAAATGTCCTTTGGGATCCATACC
ATACACCAATTATGGTTACAACACTAGTTGCGCACAGTGTCGTAAAGGGA
CATTTGGTAAAGATGATGGAAAATGTTATCCATGTGATGGTGTCAGAGAG
TATCAAGACAAGGAAGGAAAATTTTCATGCAAGAAATGTTCATTAGGATC
AACACCATCTTATTACAATGGCTACTACATTAGATGCTCTTCTTGTGCAA
AAGGATATTTTGGAAAGGATGATGGCAAATGTCACCCATGTGACGGTGCC
ATGGAGTATCAAGACCAGACAGGTAAAGTCTCGTGCAAGAAATGTCCTTT
GGGGAAAATACCATATTATTATAGGGGCTACATTGGATGCTCTTCTTGTG
GAAAAGGAACATTTGGAAAAGACGATGGAAGATGCCACCGATGTGACGGT
CCGATGGAATACCAAGACGAAGTCCAATCAAGTACGTGCAAAAAGTGTAA
ATCCTCATACGCTCCTAAAGGGTACTTAGACACCAAAACATATTGTTACT
CTTGTTTGAATGTAAATAATGGCGAGTGTATGAGCAAAGTAAAATGTCCA
TTAGGTCAAGTTCCTTCGGTGTTGTCAAACAGATATTGTTATCATTGTAG
AAAAGGGACATTTGGAAAAGAGGAAGGGAAATGTCATAAATGTGATGGTC
CCATGGAATACCAAGACGAAACAGGAACTACTTCGTGCAAAACTTGTCCT
TCAGGGAAAGTACCACATAACGTTGATGGTTACAACATTGGTTGTATCAC
GTGTAGAAAAGGAACATATTCAAAAAACGATGGAGAATGTCACATGTGCG
ACGGTTCCATGGAGTACCAGGATGATTCAGGAGCAACCTCGTGCAAAAAA
TGTCCTTCAGGGACAGTACCCCTCGAAAGTGATGGCTACAATGTTGATTG
CTCTCAATGTAGAACAGGAACAATTGAAAAAGATGGAAAGTGTATCATGT
GTGACGGTCCCATGGAATACCAAGATGATGCAGGAGAAACCTCGTGCAAA
AATTGTCATAAGGGAACAGCACCTAATGATTTTTATGGCTTCGCTACTGA
CTGCTTGGAATGTAGAAAAGGATTTTTCAATGAAAGTACTGGAAAATGTC
ACAGCAAAACAAAATGTCCAATAGGCCAAGTTGCCTCAGTCTTCCATGAT
GGCTGTCAGTATTGTCACAAAGGATATTTTGGGAAAGAGGATGGGAAATG
CCACAAATGCAATGGTGCTATGGAGTATCAGAATGAAGTAGGTGCAACTT
CGTGTAAAAAATGTCCTTCAGGGACAAGACCATATAGTTTTTATGGTCTA
CACATTGCTTGTATCACTTGTAGAAAAGGAACTTTCAGCAAAAATGATGG
AAAATGTCATAAGTGTCACGATCCTATGGAATATCAAGATGAAGAGGGTG
CAATTTCTTGTAAAAACTCCACCCTAGGCAAAATACCATATTACCAAGGT
GGTTTTGCCTCTGGTATTGTTTCTTGTAACAAAGGAACTTTTGGAAAGGA
AGATGGAAAATGTCATAAATGTAACGGTGCCATGGAATACCAAGACGAAA
TAGGGACATCTTCATGCAAAAAATGTCCCTTGGGAAGAATACCATATGAT
CAATTTGGTTGTACATCTTGTAAAATAGGAACTTTCGGAAAGAATGATGG
CAAATGTCATGATTGTGATGGTGTTATGGAATATCAGAATGAGGTTGGTG
CTGCTTCATGCAAAAAATGTCCTTTGGGAGAAGTACCACTTAGTATTGAT
GGTTTTAACACGAGTTGCTCACCTTGCCCGATTGGAACCTTTGGGAAAAG
TGACGGGAAATGCTATAAGTGTGATGGTCCCATGGAGTACCAAGACAAAA
CAGGATCATCTTCGTGTAAAAAATGTAACTCCGGAAAATATCCATATACT
TCCAATGGTTTCAATATTTACTGCTATTCGTGTAAAAGAGGAACATTTGG
AAATGGAGACGGGAAATGTCTTAAATGTACAGGCGCAATGGAATATCAAG
ACGAAACAGGAGCATCTTCATGTAAGAGCTGCGCACAAGGAAAAATACCG
TACGACAACAACGGTTTTAAAACTACATGCTCTCCTTGCGACAGAGGAAC
ATTTGGAAAATCCGATGGGAAATGTTATAAATGTGACAGTCCCATGGAAT
ATCAGAACGATATAGGAGCATCTTCGTGTAATAAGTGTCCTTTAGGGACA
ATACTGTCTACACGTGGTAGTAATAATATTGTATGTTTATCTTGCAAAGA
AGGAACTTTTGGAAAAGAAGATGGAAAATGTCATAAGTGTGACGGTCCCA
TGGAATATCAAAATGGACAGGGTGCGACTTTTTGCAAGAAATGTCCTGCA
GGGGAAATACCTAATGACTCCAACACCGACTGCTCTTCTTGTACAATTGG
ATCATTTGAAAAAGATGGAAAATGTTACAAATGTGACGGTCTCATGGAAT
ACCAAGATGATAGAGATGAAATTTCCTGTAAAACATGTCCTTTGGGACAA
ATTCCTAATGAACATAACTCTGGTTGCTCTTTATGTAAAAAGGGAACATT
TGGCAAAAATGACGGAAAATGTCATAAATGTGAAGATCCCATGGAATACC
AAGACGAAACAGGTGCAAGTGCGTGCAAGAGATGTCCATTAGGACTTATA
TCTTCCAGCGATCCTGAGGGATTCAAAACCGAATGTCAACCTTGTGGAAA
AGGAAAATATGCCAAAAATGATGGAAGATGTTATAATTGTGTCGGTGCCA
TGGAATACCAGGACCAACTGAGAGCAACATCGTGTAAGGAATGTAAAGTG
GGTAAAGTTCCTCAGGAGATTGATGGTGTTAACATACGATGCGTTTGTTG
CAAATGGGGTTATTCTGGTGCTGCTAATGGTAAATGTTATAAAGATGAAA
ATGCAGTGTGTTACGACGATCCACCCACATCAGCAGGTTCATATAAAAAT
ATACCATTGGGTACAATTTTAATACTTCTTTTAAGTTGTTTGATACTTTT
GGTATAA Coding sequence (CDS) from alignment at sc0000485_pilon:49541..53197- >XLOC_023253 ID=XLOC_023253|Name=XLOC_023253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6714bp|location=Sequence derived from alignment at sc0000485_pilon:49541..53197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGGGTGTCAATAGTATGATATTGGCATCATTGCTGTTTTTCACCTT
GTCTACGGCAATAGAAGGGGGATGTAGTAAAGGAACATATGAAATAGAAG
GAAGATGTGAACGTTGTGACGGTGTCAGGGAATACCAAGATGAAATAGGG
GCATCTTCATGCAAGAAATGTTCTTTGGGATCCGTATCAAAAACCGATTA
TTATGGTTACAACACTAGTTGCGCACAGTGTGATACAGGGACATATGAAA
TAGAAGGAAAATGTGAACATTGTAATGGTGTCATGGAATACCAAGACGAG
AAAGGAAAAACTTCATGCAAGAAATGTTCTTTGGGATCCGTATCAAAAAC
CTATTATGGTTACAACACTAGTTGCGCACAGTGTGATACAGGGACATATG
AAATAGAAGGAAAATGTGAACATTGTAATGGTGTCAGGGAATACCAAGAC
GAGAAAGGAAAAACTTCATGCAAGAAATGTCCTTTGGGATCCGTATCAAA
AACCTATTATGGTTACAACACTAGTTGCGCACAGTGCCGTGCAGGGACAT
ATGAAATAGAAGGAAAATGTAAACATTGTAATGGTGTAATGGAATACCAA
AACGAAGAAGGAAAATCTTCATGCAAGAAATGTCCTTTGGGATCCATACC
ATACACCAATTATGGTTACAACACTAGTTGCGCACAGTGTCGTAAAGGGA
CATTTGGTAAAGATGATGGAAAATGTTATCCATGTGATGGTGTCAGAGAG
TATCAAGACAAGGAAGGAAAATTTTCATGCAAGAAATGTTCATTAGGATC
AACACCATCTTATTACAATGGCTACTACATTAGATGCTCTTCTTGTGCAA
AAGGATATTTTGGAAAGGATGATGGCAAATGTCACCCATGTGACGGTGCC
ATGGAGTATCAAGACCAGACAGGTAAAGTCTCGTGCAAGAAATGTCCTTT
GGGGAAAATACCATATTATTATAGGGGCTACATTGGATGCTCTTCTTGTG
GAAAAGGAACATTTGGAAAAGACGATGGAAGATGCCACCGATGTGACGGT
CCGATGGAATACCAAGACGAAGTCCAATCAAGTACGTGCAAAAAGTGTAA
ATCCTCATACGCTCCTAAAGGGTACTTAGACACCAAAACATATTGTTACT
CTTGTTTGAATGTAAATAATGGCGAGTGTATGAGCAAAGTAAAATGTCCA
TTAGGTCAAGTTCCTTCGGTGTTGTCAAACAGATATTGTTATCATTGTAG
AAAAGGGACATTTGGAAAAGAGGAAGGGAAATGTCATAAATGTGATGGTC
CCATGGAATACCAAGACGAAACAGGAACTACTTCGTGCAAAACTTGTCCT
TCAGATGATGGGTGTCAATAGTATGATATTGGCATCATTGCTGTTTTTCA
CCTTGTCTACGGCAATAGAAGGGGGATGTAGTAAAGGAACATATGAAATA
GAAGGAAGATGTGAACGTTGTGACGGTGTCAGGGAATACCAAGATGAAAT
AGGGGCATCTTCATGCAAGAAATGTTCTTTGGGATCCGTATCAAAAACCG
ATTATTATGGTTACAACACTAGTTGCGCACAGTGTGATACAGGGACATAT
GAAATAGAAGGAAAATGTGAACATTGTAATGGTGTCATGGAATACCAAGA
CGAGAAAGGAAAAACTTCATGCAAGAAATGTTCTTTGGGATCCGTATCAA
AAACCTATTATGGTTACAACACTAGTTGCGCACAGTGTGATACAGGGACA
TATGAAATAGAAGGAAAATGTGAACATTGTAATGGTGTCAGGGAATACCA
AGACGAGAAAGGAAAAACTTCATGCAAGAAATGTCCTTTGGGATCCGTAT
CAAAAACCTATTATGGTTACAACACTAGTTGCGCACAGTGCCGTGCAGGG
ACATATGAAATAGAAGGAAAATGTAAACATTGTAATGGTGTAATGGAATA
CCAAAACGAAGAAGGAAAATCTTCATGCAAGAAATGTCCTTTGGGATCCA
TACCATACACCAATTATGGTTACAACACTAGTTGCGCACAGTGTCGTAAA
GGGACATTTGGTAAAGATGATGGAAAATGTTATCCATGTGATGGTGTCAG
AGAGTATCAAGACAAGGAAGGAAAATTTTCATGCAAGAAATGTTCATTAG
GATCAACACCATCTTATTACAATGGCTACTACATTAGATGCTCTTCTTGT
GCAAAAGGATATTTTGGAAAGGATGATGGCAAATGTCACCCATGTGACGG
TGCCATGGAGTATCAAGACCAGACAGGTAAAGTCTCGTGCAAGAAATGTC
CTTTGGGGAAAATACCATATTATTATAGGGGCTACATTGGATGCTCTTCT
TGTGGAAAAGGAACATTTGGAAAAGACGATGGAAGATGCCACCGATGTGA
CGGTCCGATGGAATACCAAGACGAAGTCCAATCAAGTACGTGCAAAAAGT
GTAAATCCTCATACGCTCCTAAAGGGTACTTAGACACCAAAACATATTGT
TACTCTTGTTTGAATGTAAATAATGGCGAGTGTATGAGCAAAGTAAAATG
TCCATTAGGTCAAGTTCCTTCGGTGTTGTCAAACAGATATTGTTATCATT
GTAGAAAAGGGACATTTGGAAAAGAGGAAGGGAAATGTCATAAATGTGAT
GGTCCCATGGAATACCAAGACGAAACAGGAACTACTTCGTGCAAAACTTG
TCCTTCAGGGACAGTACCCCTCGAAAGTGATGGCTACAATGTTGATTGCT
CTCAATGTAGAACAGGAACAATTGAAAAAGATGGAAAGTGTATCATGTGT
GACGGTCCCATGGAATACCAAGATGATGCAGGAGAAACCTCGTGCAAAAA
TTGTCATAAGGGAACAGCACCTAATGATTTTTATGGCTTCGCTACTGACT
GCTTGGAATGTAGAAAAGGATTTTTCAATGAAAGTACTGGAAAATGTCAC
AGCAAAACAAAATGTCCAATAGGCCAAGTTGCCTCAGTCTTCCATGATGG
CTGTCAGTATTGTCACAAAGGATATTTTGGGAAAGAGGATGGGAAATGCC
ACAAATGCAATGGTGCTATGGAGTATCAGAATGAAGTAGGTGCAACTTCG
TGTAAAAAATGTCCTTCAGGGACAAGACCATATAGTTTTTATGGTCTACA
CATTGCTTGTATCACTTGTAGAAAAGGAACTTTCAGCAAAAATGATGGAA
AATGTCATAAGTGTCACGATCCTATGGAATATCAAGATGAAGAGGGTGCA
ATTTCTTGTAAAAACTCCACCCTAGGCAAAATACCATATTACCAAGGTGG
TTTTGCCTCTGGTATTGTTTCTTGTAACAAAGGAACTTTTGGAAAGGAAG
ATGGAAAATGTCATAAATGTAACGGTGCCATGGAATACCAAGACGAAATA
GGGACATCTTCATGGACAGTACCCCTCGAAAGTGATGGCTACAATGTTGA
TTGCTCTCAATGTAGAACAGGAACAATTGAAAAAGATGGAAAGTGTATCA
TGTGTGACGGTCCCATGGAATACCAAGATGATGCAGGAGAAACCTCGTGC
AAAAATTGTCATAAGGGAACAGCACCTAATGATTTTTATGGCTTCGCTAC
TGACTGCTTGGAATGTAGAAAAGGATTTTTCAATGAAAGTACTGGAAAAT
GTCACAGCAAAACAAAATGTCCAATAGGCCAAGTTGCCTCAGTCTTCCAT
GATGGCTGTCAGTATTGTCACAAAGGATATTTTGGGAAAGAGGATGGGAA
ATGCCACAAATGCAATGGTGCTATGGAGTATCAGAATGAAGTAGGTGCAA
CTTCGTGTAAAAAATGTCCTTCAGGGACAAGACCATATAGTTTTTATGGT
CTACACATTGCTTGTATCACTTGTAGAAAAGGAACTTTCAGCAAAAATGA
TGGAAAATGTCATAAGTGTCACGATCCTATGGAATATCAAGATGAAGAGG
GTGCAATTTCTTGTAAAAACTCCACCCTAGGCAAAATACCATATTACCAA
GGTGGTTTTGCCTCTGGTATTGTTTCTTGTAACAAAGGAACTTTTGGAAA
GGAAGATGGAAAATGTCATAAATGTAACGGTGCCATGGAATACCAAGACG
AAATAGGGACATCTTCATGCAAAAAATGTCCTTTGGGAGAAGTACCACTT
AGTATTGATGGTTTTAACACGAGTTGCTCACCTTGCCCGATTGGAACCTT
TGGGAAAAGTGACGGGAAATGCTATAAGTGTGATGGTCCCATGGAGTACC
AAGACAAAACAGGATCATCTTCGTGTAAAAAATGTAACTCCGGAAAATAT
CCATATACTTCCAATGGTTTCAATATTTACTGCTATTCGTGTAAAAGAGG
AACATTTGGAAATGGAGACGGGAAATGTCTTAAATGTACAGGCGCAATGG
AATATCAAGACGAAACAGGAGCATCTTCATGTAAGAGCTGCGCACAAGGA
AAAATACCGTACGACAACAACGGTTTTAAAACTACATGCTCTCCTTGCGA
CAGAGGAACATTTGGAAAATCCGATGGGAAATGTTATAAATGTGACAGTC
CCATGGAATATCAGAACGATATAGGAGCATCTTCGTGTAATAAGTGTCCT
TTAGGGACAATACTGTCTACACGTGGTAGTAATAATATTGTATGTTTATC
TTGCAAAGAAGGAACTTTTGGAAAAGAAGATGGAAAATGTCATAAGTGTG
ACGGTCCCATGGAATATCAAAATGGACAGGGTGCGACTTTTTGCAAGAAA
TGTCCTGCAGGGGAAATACCTAATGACTCCAACACCGACTGCTCTTCTTG
TACAATTGGATCATTTGAAAAAGATGGAAAATGTTACAAATGTGACGGTC
TCATGGAATACCAAGATGATAGAGATGAAATTTCCTGTAAAACATGTCCT
TTGGGACAAATTCCTAATGAACATAACTCTGGTTGCTCTTTATGTAAAAA
GGGAACATTTGGCAAAAATGACGGAAAATGTCATAAATGTGAAGATCCCA
TGGAATACCAAGACGAAACAGGTGCAAGTGCGTGCAAGAGATGTCCATTA
GGACTTATATCTTCCAGCGATCCTGAGGGATTCAAAACCGAATGTCAACC
TTGTGGAAAAGGAAAATATGCCAAAAATGATGGAAGATGTTATAATTGTG
TCGGTGCCATGGAATACCAGGACCAACTGAGAGCAACATCGTGTAAGGAA
TGTAAAGTGGGTAAAGTTCCTCAGGAGATTGATGGTGTTAACATACGATG
CGTTTGTTGCAAATGGGGTTATTCTGGTGCTGCTAATGGTAAATGTTATA
AAGATGAAAATGCAGTGTGTTACGACGATCCACCCACATCAGCAGGTTCA
TATAAAAATATACCATTGGGTACAATTTTAATACTTCTTTTAAGTTGTTT
GATACTTTTGGTATAAGCAAAAAATGTCCTTTGGGAGAAGTACCACTTAG
TATTGATGGTTTTAACACGAGTTGCTCACCTTGCCCGATTGGAACCTTTG
GGAAAAGTGACGGGAAATGCTATAAGTGTGATGGTCCCATGGAGTACCAA
GACAAAACAGGATCATCTTCGTGTAAAAAATGTAACTCCGGAAAATATCC
ATATACTTCCAATGGTTTCAATATTTACTGCTATTCGTGTAAAAGAGGAA
CATTTGGAAATGGAGACGGGAAATGTCTTAAATGTACAGGCGCAATGGAA
TATCAAGACGAAACAGGAGCATCTTCATGTAAGAGCTGCGCACAAGGAAA
AATACCGTACGACAACAACGGTTTTAAAACTACATGCTCTCCTTGCGACA
GAGGAACATTTGGAAAATCCGATGGGAAATGTTATAAATGTGACAGTCCC
ATGGAATATCAGAACGATATAGGAGCATCTTCGTGTAATAAGTGTCCTTT
AGGGACAATACTGTCTACACGTGGTAGTAATAATATTGTATGTTTATCTT
GCAAAGAAGGAACTTTTGGAAAAGAAGATGGAAAATGTCATAAGTGTGAC
GGTCCCATGGAATATCAAAATGGACAGGGTGCGACTTTTTGCAAGAAATG
TCCTGCAGGGGAAATACCTAATGACTCCAACACCGACTGCTCTTCTTGTA
CAATTGGATCATTTGAAAAAGATGGAAAATGTTACAAATGTGACGGTCTC
ATGGAATACCAAGATGATAGAGATGAAATTTCCTGTAAAACATGTCCTTT
GGGACAAATTCCTAATGAACATAACTCTGGTTGCTCTTTATGTAAAAAGG
GAACATTTGGCAAAAATGACGGAAAATGTCATAAATGTGAAGATCCCATG
GAATACCAAGACGAAACAGGTGCAAGTGCGTGCAAGAGATGTCCATTAGG
ACTTATATCTTCCAGCGATCCTGAGGGATTCAAAACCGAATGTCAACCTT
GTGGAAAAGGAAAATATGCCAAAAATGATGGAAGATGTTATAATTGTGTC
GGTGCCATGGAATACCAGGACCAACTGAGAGCAACATCGTGTAAGGAATG
TAAAGTGGGTAAAGTTCCTCAGGAGATTGATGGTGTTAACATACGATGCG
TTTGTTGCAAATGGGGTTATTCTGGTGCTGCTAATGGTAAATGTTATAAA
GATGAAAATGCAGTGTGTTACGACGATCCACCCACATCAGCAGGTTCATA
TAAAAATATACCATTGGGTACAATTTTAATACTTCTTTTAAGTTGTTTGA
TACTTTTGGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000485_pilon | genome | sc0000485_pilon:49541..53197 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 2062-3357:1297 |
| Aaloc | 1357-2058:2146 |
| Aaloc | 1-1353:3658 |
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