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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000297_pilon:136717..139898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023086 ID=XLOC_023086|Name=XLOC_023086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3182bp|location=Sequence derived from alignment at sc0000297_pilon:136717..139898+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGCCGAAAACCTAGAAAATCAAATGGGTCAAATGCTTGAGCAGATACG
CTCAATGGATGAAGAAATTCAGTCGCTGAAATGTaagttatgaaattttt
caatcaatcgCTCTGTTCTATTTCTCAGTCTTTTAAATTTTGTCTTCTCC
ATCctgtacatttttttcatatatttcttCTGAGAACTTGCTATAATTGG
GAATTTGAAATTGAGCAATTCAAGGAGACTTGAATGTTTTAATGTTTTCc
caatttaaaaataaacaaagtggGTTCTGGATTTGTTTTGACTAAAAACC
CAATCAATCATTGAAAAGTCTcaattgaaattttataaattgaattggac
atttttcaatatttttggaaacAAGGCCAAAATCCATGAAATCCGCAAAA
GCTAACCATTAAACATTAAATTAATAtgagattgttttttttttcagtac
aaAATGCCAAAAGTTCTGAGCAATCCGAGGAAGTGGAGGCCAAAGATATG
ACTGGAGAGAAATCAGCAGAagagaaatcgaaaaaaaaacagaacggtaa
attttttaattagaactttttatatttttagtcaaacacttttatatatt
tctagaaaGCTAATGAGGAATCGAAatcgacattggcacttaaagggtta
ataacACTATACTATAGATACCCTTTTGTATCATcatttttgaccttttg
ataAGAAATATAATGTTCTGTAATAAAACTTTCCTTAAAGTGAGGGTTTT
TTCCCTCTATATTCAGCTCCCGGACAAGCGATGGGCAGTAGCAGCCATCA
TGACATATACAAATGTATCGGTGAGTGAATATTGATTTACACTGTCTGTA
AAGAAGCGTTTATACATTACGTGCATACATTATGTATAAGAATACTTGAT
ATCTGATAGtttttttATAGACAGTGCACCGTAATGGTTCAATTAAAAGc
ccccccctttttccagttttttttttaataaataccCCCTCTATTAAACG
CCCCCAACCTGAGGGGGCATTTATTCGAGACACACTAAAAACATATAAAA
CGTAAAAACAAGTAGACTACTACATTGCATTGTTTCAGTTTCACAGTAtt
tttttCGtataaaaacaaggaaattggCGATAGacacctttctttttaaa
ttttagagttacagtgggaaactttttctttcttttttaaaattccTGAT
gtataaaggaaaaaaagaagagttctacaaaaatgtaataaacgccccct
ggaataaacgccccctaaaaattcaaaaagtttaataaacGCCCAGGGCG
TTTAATCGAAGCATTACGGTATACTTTGTCTCTCAGTATGACCTGATAGT
CCAGAAACAAAACAGCAAAGATCCCACCTTTTACTGGACCTTTGGAGCCA
CGTGGCTTTTATCTTCCTATGCCTTTATATAGATTACGTTTTAAGCAGGT
TGAAAAGGGTTCCGttacagggggaggggggttgacgattttcaattttt
tttgaatcagGTGGGGGTGACCCTATACAAGTGGGGGTGGAAATTTCCAG
GTGTGGGTTGTGGAGTTTTGAGAGTATCTCTAGATCTTTCATATTTGTTA
TGAGAACTTAACttgagttgaaaaaaaaatagaaaaaaaatattcaagtt
tGTTTTACAAGAAACTAATTAATAAATATGTAACTTAGAAGCTTCAtttt
gtaataatattttattttatttaatatttaaaacGTTTCGGTCTTCATCC
AAAGACCATCATCAGTTAAAAAACAAGTAAGAAAGTTATGTGCACATATT
TATATCAGAGTCGCTACAAGTAGAATAAAAAAGAATGTTAATGCGCTAAT
TACGTACATTAGAACATTAGAACATTCTGGAAAGGATAATAATTCCCACG
TTACCAAACACACGCAACAATATGGGCATGGTGAAATTACGTTAGACAAT
GTAAAAATACTTAATAGTAATTACAAAAACTACTACAAAAGAAAGGTTTC
GGAAGCATTATATATTAGACAAAAGAAACCTGTATTAAATGTGCAAGATA
TGTCTGTTCCCTTGAAACTTTTTAACTAATAGCattttaattattgtaac
atattttaacacatttatcgacaattttattacttttattatCCTACAAT
TACAAGTAGAATAAGAAGAAAAACGTGCGTTTATTATTGTACGTAATTAG
CGCATTAACATCCTTTTTTATTCTACTTGTAGCGACTCTGATATAAATAT
GTGTACATAACTTTCTTACTTGTTTTTTAACTGATGATCGTCTTTGGATG
AAGACCGAAACgttttaaatattaaataaaataaaatattattacaaaaT
GAAGCTTCTAAGTTACATATTTATTATTAAGCTGATTGCCCAAAcaaatt
tatttaagaaagtAATTGTCTTCCAGTCTCTTTCTCTCCAGTCTGTATTC
TTCTTGGCCTTTGACTGGGATTTTAAGTGTTCCTAAAGGGAATAAAATCT
CCAAGTTTAGCCAGGTTCTATTGCACCGTTTTCAGGTGAGGGTTGGAAGG
TTTTACaaattcaggtgggggttggaagggtgttgcccactatgtAGAGA
TGAGGTAAAGTCTTTTTAGAAAATCTTAATAATTGAAAACGATAGCCTTT
GACCCAATTAgcaaaaatatggtataatatcaggggttgccaagccaaat
ttttcagaaattgacctagaatgctaagcaacctcAGGGCTAAGGCTAGA
AATCGAGTTACCAATAGTGTGACcgattaaaatgtcaattttaaaagttt
aaatggCTTATTTCAATTGTTCCATCTGATAGAGGATAGAGATAGAAAAG
TAGATGTCAAAAATGGTGTCATTTGTAAAAGTTCAGATATCCCAAGACTT
TTAAACTTTACTAGTCCACAGCATCATCCGAGGTGGGATGAACCCCctct
ttatttcttaaaaactattttgctttaaaaatgcCTTTCTCCGCTAGGTA
GGCTTTTACTTGACaagttttccatttttattataGAGCGCACATACCGA
GAGTTCTTGCTGAGGGTGCAAGAACACTCCACGAATGACACATCAGACGC
AGCCTTGGGCTTCTGGGTTTGCAACTTGGGGACACAAATCCCAAGACAGC
GGCCCACCGGAGGAAAACGAAAACGCAACTGA Coding sequence (CDS) from alignment at sc0000297_pilon:136717..139898+ >XLOC_023086 ID=XLOC_023086|Name=XLOC_023086|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=762bp|location=Sequence derived from alignment at sc0000297_pilon:136717..139898+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGCCGAAAACCTAGAAAATCAAATGGGTCAAATGCTTGAGCAGATACG
CTCAATGGATGAAGAAATTCAGTCGCTGAAATatgGCCGAAAACCTAGAA
AATCAAATGGGTCAAATGCTTGAGCAGATACGCTCAATGGATGAAGAAAT
TCAGTCGCTGAAATtacaaAATGCCAAAAGTTCTGAGCAATCCGAGGAAG
TGGAGGCCAAAGATATGACTGGAGAGAAATCAGCAGAagagaaatcgaaa
aaaaaacagaacgtacaaAATGCCAAAAGTTCTGAGCAATCCGAGGAAGT
GGAGGCCAAAGATATGACTGGAGAGAAATCAGCAGAagagaaatcgaaaa
aaaaacagaacgCTCCCGGACAAGCGATGGGCAGTAGCAGCCATCATGAC
ATATACAAATGTATCGCTCCCGGACAAGCGATGGGCAGTAGCAGCCATCA
TGACATATACAAATGTATCGAGCGCACATACCGAGAGTTCTTGCTGAGGG
TGCAAGAACACTCCACGAATGACACATCAGACGCAGCCTTGGGCTTCTGG
GTTTGCAACTTGGGGACACAAATCCCAAGACAGCGGCCCACCGGAGGAAA
ACGAAAACGCAACTGAAGCGCACATACCGAGAGTTCTTGCTGAGGGTGCA
AGAACACTCCACGAATGACACATCAGACGCAGCCTTGGGCTTCTGGGTTT
GCAACTTGGGGACACAAATCCCAAGACAGCGGCCCACCGGAGGAAAACGA
AAACGCAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000297_pilon | genome | sc0000297_pilon:136717..139898 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 238-381:3039 |
| Aaloc | 184-234:769 |
| Aaloc | 85-180:450 |
| Aaloc | 1-81:1 |
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